RNA–Protein interactions for RNA: ENST00000545209.1

SPPL3-209, Transcript of signal peptide peptidase like 3, humanhuman

TSL 1 (best)

Gene SPPL3, Length 797 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-209ENST00000545209 KIAA1551Q9HCM1 1747 aa8.18□□□□□ -1.1
SPPL3-209ENST00000545209 EP400Q96L91 3159 aa8.18□□□□□ -1.1
SPPL3-209ENST00000545209 GOLGA6L4A6NEF3 574 aa8.18□□□□□ -1.1
SPPL3-209ENST00000545209 USP17L12C9JPN9 530 aa8.18□□□□□ -1.1
SPPL3-209ENST00000545209 USP17L21D6R901 530 aa8.18□□□□□ -1.1
SPPL3-209ENST00000545209 SIAH2O43255 324 aa8.18□□□□□ -1.1
SPPL3-209ENST00000545209 ORC4O43929 436 aa8.18□□□□□ -1.1
SPPL3-209ENST00000545209 DTNBO60941 627 aa8.18□□□□□ -1.1
SPPL3-209ENST00000545209 ZNF445P59923 1031 aa8.18□□□□□ -1.1
SPPL3-209ENST00000545209 TRIM29Q14134 588 aa8.18□□□□□ -1.1
SPPL3-209ENST00000545209 PPP2R5BQ15173 497 aa8.18□□□□□ -1.1
SPPL3-209ENST00000545209 EZH2Q15910 746 aaKnown RBP8.18□□□□□ -1.1
SPPL3-209ENST00000545209 RTN1Q16799 776 aa8.18□□□□□ -1.1
SPPL3-209ENST00000545209 ZSCAN23Q3MJ62 389 aa8.18□□□□□ -1.1
SPPL3-209ENST00000545209 MFSD14BQ5SR56 506 aa8.18□□□□□ -1.1
SPPL3-209ENST00000545209 CTR9Q6PD62 1173 aa8.18□□□□□ -1.1
SPPL3-209ENST00000545209 TRIM22Q8IYM9 498 aa8.18□□□□□ -1.1
SPPL3-209ENST00000545209 WASF1Q92558 559 aa8.18□□□□□ -1.1
SPPL3-209ENST00000545209 CNKSR1Q969H4 720 aa8.18□□□□□ -1.1
SPPL3-209ENST00000545209 SPATA32Q96LK8 384 aa8.18□□□□□ -1.1
SPPL3-209ENST00000545209 ZNF287Q9HBT7 754 aa8.18□□□□□ -1.1
SPPL3-209ENST00000545209 MCM9Q9NXL9 1143 aa8.18□□□□□ -1.1
SPPL3-209ENST00000545209 NID2Q14112 1375 aa8.18□□□□□ -1.1
SPPL3-209ENST00000545209 RANBP6O60518 1105 aaKnown RBP8.17□□□□□ -1.1
SPPL3-209ENST00000545209 LETM1O95202 739 aaPredicted RBP8.17□□□□□ -1.1
SPPL3-209ENST00000545209 FGRP09769 529 aa8.17□□□□□ -1.1
SPPL3-209ENST00000545209 CALM1P0DP23 149 aa8.17□□□□□ -1.1
SPPL3-209ENST00000545209 CALM2P0DP24 149 aa8.17□□□□□ -1.1
SPPL3-209ENST00000545209 CALM3P0DP25 149 aa8.17□□□□□ -1.1
SPPL3-209ENST00000545209 VARSP26640 1264 aaKnown RBP8.17□□□□□ -1.1
SPPL3-209ENST00000545209 IARSP41252 1262 aaKnown RBP8.17□□□□□ -1.1
SPPL3-209ENST00000545209 SSRP1Q08945 709 aaKnown RBP8.17□□□□□ -1.1
SPPL3-209ENST00000545209 NR6A1Q15406 480 aa8.17□□□□□ -1.1
SPPL3-209ENST00000545209 CCDC178Q5BJE1 867 aa8.17□□□□□ -1.1
SPPL3-209ENST00000545209 CCDC183Q5T5S1 534 aa8.17□□□□□ -1.1
SPPL3-209ENST00000545209 BRAPQ7Z569 592 aa8.17□□□□□ -1.1
SPPL3-209ENST00000545209 CATIPQ7Z7H3 387 aa8.17□□□□□ -1.1
SPPL3-209ENST00000545209 SLC51AQ86UW1 340 aa8.17□□□□□ -1.1
SPPL3-209ENST00000545209 RAB11FIP4Q86YS3 637 aa8.17□□□□□ -1.1
SPPL3-209ENST00000545209 STK11IPQ8N1F8 1099 aa8.17□□□□□ -1.1
SPPL3-209ENST00000545209 ZSCAN10Q96SZ4 725 aaPredicted RBP8.17□□□□□ -1.1
SPPL3-209ENST00000545209 INCENPQ9NQS7 918 aa8.17□□□□□ -1.1
SPPL3-209ENST00000545209 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.17□□□□□ -1.1
SPPL3-209ENST00000545209 TNKSO95271 1327 aa8.17□□□□□ -1.1
SPPL3-209ENST00000545209 STK36Q9NRP7 1315 aa8.17□□□□□ -1.1
SPPL3-209ENST00000545209 LTBP1Q14766 1721 aa8.17□□□□□ -1.1
SPPL3-209ENST00000545209 CYP2D7A0A087X1C5 515 aa8.16□□□□□ -1.1
SPPL3-209ENST00000545209 GPR75-ASB3A0A0A6YYF3 556 aa8.16□□□□□ -1.1
SPPL3-209ENST00000545209 J3QL48 77 aa8.16□□□□□ -1.1
SPPL3-209ENST00000545209 LCE2BO14633 110 aa8.16□□□□□ -1.1
SPPL3-209ENST00000545209 GADD45BO75293 160 aaPredicted RBP8.16□□□□□ -1.1
SPPL3-209ENST00000545209 POLR3DP05423 398 aaPredicted RBP8.16□□□□□ -1.1
SPPL3-209ENST00000545209 LAMB1P07942 1786 aa8.16□□□□□ -1.1
SPPL3-209ENST00000545209 FDPSP14324 419 aaKnown RBP8.16□□□□□ -1.1
SPPL3-209ENST00000545209 SMPD1P17405 629 aa8.16□□□□□ -1.1
SPPL3-209ENST00000545209 BTDP43251 543 aa8.16□□□□□ -1.1
SPPL3-209ENST00000545209 GTF2IP78347 998 aa8.16□□□□□ -1.1
SPPL3-209ENST00000545209 GNL2Q13823 731 aaKnown RBP8.16□□□□□ -1.1
SPPL3-209ENST00000545209 QSER1Q2KHR3 1735 aa8.16□□□□□ -1.1
SPPL3-209ENST00000545209 IFIT1BQ5T764 474 aaKnown RBP8.16□□□□□ -1.1
SPPL3-209ENST00000545209 CC2D2BQ6DHV5 1058 aa8.16□□□□□ -1.1
SPPL3-209ENST00000545209 BPHLQ86WA6 291 aaPredicted RBP8.16□□□□□ -1.1
SPPL3-209ENST00000545209 TEX11Q8IYF3 940 aa8.16□□□□□ -1.1
SPPL3-209ENST00000545209 ZNF654Q8IZM8 581 aa8.16□□□□□ -1.1
SPPL3-209ENST00000545209 FBXO18Q8NFZ0 1043 aa8.16□□□□□ -1.1
SPPL3-209ENST00000545209 SH3RF3Q8TEJ3 882 aaPredicted RBP8.16□□□□□ -1.1
SPPL3-209ENST00000545209 LEO1Q8WVC0 666 aaPredicted RBP8.16□□□□□ -1.1
SPPL3-209ENST00000545209 ANP32BQ92688 251 aaKnown RBP8.16□□□□□ -1.1
SPPL3-209ENST00000545209 FOXJ1Q92949 421 aa8.16□□□□□ -1.1
SPPL3-209ENST00000545209 ZKSCAN3Q9BRR0 538 aa8.16□□□□□ -1.1
SPPL3-209ENST00000545209 ALG1Q9BT22 464 aa8.16□□□□□ -1.1
SPPL3-209ENST00000545209 RTFDC1Q9BY42 306 aaPredicted RBP8.16□□□□□ -1.1
SPPL3-209ENST00000545209 GRPEL1Q9HAV7 217 aa8.16□□□□□ -1.1
SPPL3-209ENST00000545209 RBM28Q9NW13 759 aaKnown RBP8.16□□□□□ -1.1
SPPL3-209ENST00000545209 TACC3Q9Y6A5 838 aa8.16□□□□□ -1.1
SPPL3-209ENST00000545209 COL11A2P13942 1736 aaPredicted RBP8.15□□□□□ -1.1
SPPL3-209ENST00000545209 ROBO3Q96MS0 1386 aa8.15□□□□□ -1.1
SPPL3-209ENST00000545209 GAKO14976 1311 aa8.15□□□□□ -1.1
SPPL3-209ENST00000545209 TSPY2A6NKD2 308 aa8.15□□□□□ -1.1
SPPL3-209ENST00000545209 DDAH1O94760 285 aa8.15□□□□□ -1.1
SPPL3-209ENST00000545209 ALDH1A1P00352 501 aa8.15□□□□□ -1.1
SPPL3-209ENST00000545209 IFNAR1P17181 557 aa8.15□□□□□ -1.1
SPPL3-209ENST00000545209 RXRAP19793 462 aa8.15□□□□□ -1.1
SPPL3-209ENST00000545209 CDC27P30260 824 aa8.15□□□□□ -1.1
SPPL3-209ENST00000545209 ADD1P35611 737 aaKnown RBP8.15□□□□□ -1.1
SPPL3-209ENST00000545209 AKAP17AQ02040 695 aaKnown RBP8.15□□□□□ -1.1
SPPL3-209ENST00000545209 GUCY1B3Q02153 619 aa8.15□□□□□ -1.1
SPPL3-209ENST00000545209 AGERQ15109 404 aa8.15□□□□□ -1.1
SPPL3-209ENST00000545209 SAFBQ15424 915 aaKnown RBP eCLIP8.15□□□□□ -1.1
SPPL3-209ENST00000545209 SEC23AQ15436 765 aa8.15□□□□□ -1.1
SPPL3-209ENST00000545209 C12orf60Q5U649 245 aa8.15□□□□□ -1.1
SPPL3-209ENST00000545209 TTC6Q86TZ1 520 aa8.15□□□□□ -1.1
SPPL3-209ENST00000545209 CCDC144CPQ8IYA2 1237 aa8.15□□□□□ -1.1
SPPL3-209ENST00000545209 ENAHQ8N8S7 591 aaPredicted RBP8.15□□□□□ -1.1
SPPL3-209ENST00000545209 SUPT20HQ8NEM7 779 aa8.15□□□□□ -1.1
SPPL3-209ENST00000545209 TGFBRAP1Q8WUH2 860 aa8.15□□□□□ -1.1
SPPL3-209ENST00000545209 NUP133Q8WUM0 1156 aa8.15□□□□□ -1.1
SPPL3-209ENST00000545209 GPKOWQ92917 476 aaPredicted RBP eCLIP8.15□□□□□ -1.1
SPPL3-209ENST00000545209 MYL10Q9BUA6 226 aa8.15□□□□□ -1.1
SPPL3-209ENST00000545209 SLC26A6Q9BXS9 759 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms