RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-222ENST00000544585 USP50Q70EL3 339 aaPredicted RBP7.99□□□□□ -1.13
CPSF7-222ENST00000544585 JAZF1Q86VZ6 243 aa7.99□□□□□ -1.13
CPSF7-222ENST00000544585 IL17REQ8NFR9 667 aa7.99□□□□□ -1.13
CPSF7-222ENST00000544585 SPACA7Q96KW9 195 aa7.99□□□□□ -1.13
CPSF7-222ENST00000544585 CAPNS2Q96L46 248 aa7.99□□□□□ -1.13
CPSF7-222ENST00000544585 PSMD1Q99460 953 aa7.99□□□□□ -1.13
CPSF7-222ENST00000544585 EFCC1Q9HA90 598 aa7.99□□□□□ -1.13
CPSF7-222ENST00000544585 KCNQ5Q9NR82 932 aa7.99□□□□□ -1.13
CPSF7-222ENST00000544585 TLR7Q9NYK1 1049 aaKnown RBP7.99□□□□□ -1.13
CPSF7-222ENST00000544585 PLA2G2EQ9NZK7 142 aa7.99□□□□□ -1.13
CPSF7-222ENST00000544585 ZFATQ9P243 1243 aa7.99□□□□□ -1.13
CPSF7-222ENST00000544585 TLR6Q9Y2C9 796 aa7.99□□□□□ -1.13
CPSF7-222ENST00000544585 PCDHGC4Q9Y5F7 938 aa7.99□□□□□ -1.13
CPSF7-222ENST00000544585 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.99□□□□□ -1.13
CPSF7-222ENST00000544585 MRPL42Q9Y6G3 142 aaKnown RBP7.99□□□□□ -1.13
CPSF7-222ENST00000544585 ADAMTS7Q9UKP4 1686 aa7.98□□□□□ -1.13
CPSF7-222ENST00000544585 DICER1Q9UPY3 1922 aaKnown RBP7.98□□□□□ -1.13
CPSF7-222ENST00000544585 DCDC2BA2VCK2 349 aa7.98□□□□□ -1.13
CPSF7-222ENST00000544585 EFSO43281 561 aa7.98□□□□□ -1.13
CPSF7-222ENST00000544585 KIF4AO95239 1232 aa7.98□□□□□ -1.13
CPSF7-222ENST00000544585 BMP1P13497 986 aa7.98□□□□□ -1.13
CPSF7-222ENST00000544585 LMNB2Q03252 620 aa7.98□□□□□ -1.13
CPSF7-222ENST00000544585 CAMK2GQ13555 558 aaPredicted RBP7.98□□□□□ -1.13
CPSF7-222ENST00000544585 LAMC2Q13753 1193 aa7.98□□□□□ -1.13
CPSF7-222ENST00000544585 RIPOR1Q6ZS17 1223 aa7.98□□□□□ -1.13
CPSF7-222ENST00000544585 GOLM1Q8NBJ4 401 aa7.98□□□□□ -1.13
CPSF7-222ENST00000544585 NKD1Q969G9 470 aa7.98□□□□□ -1.13
CPSF7-222ENST00000544585 SRPK1Q96SB4 655 aaKnown RBP7.98□□□□□ -1.13
CPSF7-222ENST00000544585 UBP1Q9NZI7 540 aa7.98□□□□□ -1.13
CPSF7-222ENST00000544585 SCN4AP35499 1836 aa7.98□□□□□ -1.13
CPSF7-222ENST00000544585 RNF123Q5XPI4 1314 aa7.98□□□□□ -1.13
CPSF7-222ENST00000544585 ZNF541Q9H0D2 1346 aa7.98□□□□□ -1.13
CPSF7-222ENST00000544585 BTBD11A6QL63 1104 aa7.97□□□□□ -1.13
CPSF7-222ENST00000544585 GREM1O60565 184 aa7.97□□□□□ -1.13
CPSF7-222ENST00000544585 CELA3AP09093 270 aa7.97□□□□□ -1.13
CPSF7-222ENST00000544585 SNRPA1P09661 255 aaKnown RBP7.97□□□□□ -1.13
CPSF7-222ENST00000544585 TCEAL1Q15170 157 aa7.97□□□□□ -1.13
CPSF7-222ENST00000544585 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.97□□□□□ -1.13
CPSF7-222ENST00000544585 TTBK2Q6IQ55 1244 aa7.97□□□□□ -1.13
CPSF7-222ENST00000544585 ANAPC16Q96DE5 110 aa7.97□□□□□ -1.13
CPSF7-222ENST00000544585 HHIPL1Q96JK4 782 aa7.97□□□□□ -1.13
CPSF7-222ENST00000544585 CNTNAP3BQ96NU0 1288 aa7.97□□□□□ -1.13
CPSF7-222ENST00000544585 CNTNAP3Q9BZ76 1288 aa7.97□□□□□ -1.13
CPSF7-222ENST00000544585 VPS33BQ9H267 617 aa7.97□□□□□ -1.13
CPSF7-222ENST00000544585 NIP7Q9Y221 180 aaKnown RBP eCLIP7.97□□□□□ -1.13
CPSF7-222ENST00000544585 USP16Q9Y5T5 823 aa7.97□□□□□ -1.13
CPSF7-222ENST00000544585 FER1L6Q2WGJ9 1857 aa7.97□□□□□ -1.13
CPSF7-222ENST00000544585 TJP1Q07157 1748 aa7.97□□□□□ -1.13
CPSF7-222ENST00000544585 MAP3K6O95382 1288 aa7.96□□□□□ -1.14
CPSF7-222ENST00000544585 ACPPP15309 386 aa7.96□□□□□ -1.14
CPSF7-222ENST00000544585 ITPKAP23677 461 aa7.96□□□□□ -1.14
CPSF7-222ENST00000544585 HSD3B2P26439 372 aa7.96□□□□□ -1.14
CPSF7-222ENST00000544585 EPS15P42566 896 aa7.96□□□□□ -1.14
CPSF7-222ENST00000544585 GRIA4P48058 902 aa7.96□□□□□ -1.14
CPSF7-222ENST00000544585 RAB33AQ14088 237 aa7.96□□□□□ -1.14
CPSF7-222ENST00000544585 CST9Q5W186 159 aa7.96□□□□□ -1.14
CPSF7-222ENST00000544585 PCNX4Q63HM2 1172 aa7.96□□□□□ -1.14
CPSF7-222ENST00000544585 CYP4F22Q6NT55 531 aa7.96□□□□□ -1.14
CPSF7-222ENST00000544585 NECAB3Q96P71 396 aaPredicted RBP7.96□□□□□ -1.14
CPSF7-222ENST00000544585 SRRTQ9BXP5 876 aaKnown RBP7.96□□□□□ -1.14
CPSF7-222ENST00000544585 MCOLN1Q9GZU1 580 aa7.96□□□□□ -1.14
CPSF7-222ENST00000544585 TMX4Q9H1E5 349 aaPredicted RBP7.96□□□□□ -1.14
CPSF7-222ENST00000544585 DZANK1Q9NVP4 752 aa7.96□□□□□ -1.14
CPSF7-222ENST00000544585 MARK1Q9P0L2 795 aa7.96□□□□□ -1.14
CPSF7-222ENST00000544585 SCN11AQ9UI33 1791 aa7.95□□□□□ -1.14
CPSF7-222ENST00000544585 DLEC1Q9Y238 1755 aa7.95□□□□□ -1.14
CPSF7-222ENST00000544585 TRPA1O75762 1119 aa7.95□□□□□ -1.14
CPSF7-222ENST00000544585 MAPTP10636 758 aaKnown RBP7.95□□□□□ -1.14
CPSF7-222ENST00000544585 HSPA5P11021 654 aaKnown RBP7.95□□□□□ -1.14
CPSF7-222ENST00000544585 GARTP22102 1010 aa7.95□□□□□ -1.14
CPSF7-222ENST00000544585 TNP2Q05952 138 aa7.95□□□□□ -1.14
CPSF7-222ENST00000544585 SPEM2Q0P670 501 aa7.95□□□□□ -1.14
CPSF7-222ENST00000544585 GRM1Q13255 1194 aa7.95□□□□□ -1.14
CPSF7-222ENST00000544585 DIEXFQ68CQ4 756 aaKnown RBP7.95□□□□□ -1.14
CPSF7-222ENST00000544585 AGMOQ6ZNB7 445 aa7.95□□□□□ -1.14
CPSF7-222ENST00000544585 DHX32Q7L7V1 743 aaKnown RBP7.95□□□□□ -1.14
CPSF7-222ENST00000544585 CEP120Q8N960 986 aa7.95□□□□□ -1.14
CPSF7-222ENST00000544585 ASAP3Q8TDY4 903 aa7.95□□□□□ -1.14
CPSF7-222ENST00000544585 HNRNPLLQ8WVV9 542 aaKnown RBP7.95□□□□□ -1.14
CPSF7-222ENST00000544585 BHMTQ93088 406 aa7.95□□□□□ -1.14
CPSF7-222ENST00000544585 ZFP42Q96MM3 310 aa7.95□□□□□ -1.14
CPSF7-222ENST00000544585 NSUN5Q96P11 429 aaKnown RBP7.95□□□□□ -1.14
CPSF7-222ENST00000544585 NYXQ9GZU5 481 aa7.95□□□□□ -1.14
CPSF7-222ENST00000544585 NUCKS1Q9H1E3 243 aaKnown RBP7.95□□□□□ -1.14
CPSF7-222ENST00000544585 SEC31BQ9NQW1 1179 aa7.95□□□□□ -1.14
CPSF7-222ENST00000544585 PRKAG3Q9UGI9 489 aa7.95□□□□□ -1.14
CPSF7-222ENST00000544585 GPN3Q9UHW5 284 aaPredicted RBP7.95□□□□□ -1.14
CPSF7-222ENST00000544585 DNMT3LQ9UJW3 386 aa7.95□□□□□ -1.14
CPSF7-222ENST00000544585 MRC1P22897 1456 aa7.94□□□□□ -1.14
CPSF7-222ENST00000544585 SLX4Q8IY92 1834 aa7.94□□□□□ -1.14
CPSF7-222ENST00000544585 A0A096LPE4 126 aa7.94□□□□□ -1.14
CPSF7-222ENST00000544585 A0A1W2PPZ6 126 aa7.94□□□□□ -1.14
CPSF7-222ENST00000544585 METTL12A8MUP2 240 aa7.94□□□□□ -1.14
CPSF7-222ENST00000544585 H7C1W4 665 aa7.94□□□□□ -1.14
CPSF7-222ENST00000544585 ENC1O14682 589 aa7.94□□□□□ -1.14
CPSF7-222ENST00000544585 KLF4O43474 513 aa7.94□□□□□ -1.14
CPSF7-222ENST00000544585 HOXD8P13378 290 aaPredicted RBP7.94□□□□□ -1.14
CPSF7-222ENST00000544585 HOXA10P31260 410 aaPredicted RBP7.94□□□□□ -1.14
CPSF7-222ENST00000544585 RPS26P62854 115 aaKnown RBP7.94□□□□□ -1.14
CPSF7-222ENST00000544585 SPRED3Q2MJR0 410 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms