RNA–Protein interactions for RNA: ENST00000544299.5

CHERP-202, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 2

Gene CHERP, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-202ENST00000544299 MYSM1Q5VVJ2 828 aa20.9■□□□□ 0.94
CHERP-202ENST00000544299 USP28Q96RU2 1077 aa20.9■□□□□ 0.94
CHERP-202ENST00000544299 DEFB129Q9H1M3 183 aa20.9■□□□□ 0.94
CHERP-202ENST00000544299 CABP5Q9NP86 173 aa20.9■□□□□ 0.94
CHERP-202ENST00000544299 ZBTB21Q9ULJ3 1066 aa20.9■□□□□ 0.94
CHERP-202ENST00000544299 ELP1O95163 1332 aa20.9■□□□□ 0.94
CHERP-202ENST00000544299 ATAD5Q96QE3 1844 aa20.9■□□□□ 0.94
CHERP-202ENST00000544299 PHF20L1A8MW92 1017 aa20.9■□□□□ 0.94
CHERP-202ENST00000544299 ATL3Q6DD88 541 aa20.9■□□□□ 0.94
CHERP-202ENST00000544299 DIS3L2Q8IYB7 885 aaKnown RBP20.9■□□□□ 0.94
CHERP-202ENST00000544299 SCAND2PQ9GZW5 306 aaPredicted RBP20.9■□□□□ 0.94
CHERP-202ENST00000544299 BTBD18B2RXH4 712 aa20.89■□□□□ 0.93
CHERP-202ENST00000544299 APOBEC3FQ8IUX4 373 aaKnown RBP20.89■□□□□ 0.93
CHERP-202ENST00000544299 OXER1Q8TDS5 423 aa20.89■□□□□ 0.93
CHERP-202ENST00000544299 ZNF396Q96N95 335 aaPredicted RBP20.89■□□□□ 0.93
CHERP-202ENST00000544299 RIOX1Q9H6W3 641 aa20.89■□□□□ 0.93
CHERP-202ENST00000544299 A0A1W2PRG0 241 aa20.88■□□□□ 0.93
CHERP-202ENST00000544299 CAP2P40123 477 aa20.88■□□□□ 0.93
CHERP-202ENST00000544299 SPATA32Q96LK8 384 aa20.88■□□□□ 0.93
CHERP-202ENST00000544299 UBA5Q9GZZ9 404 aa20.88■□□□□ 0.93
CHERP-202ENST00000544299 GPCPD1Q9NPB8 672 aa20.88■□□□□ 0.93
CHERP-202ENST00000544299 GGA3Q9NZ52 723 aa20.88■□□□□ 0.93
CHERP-202ENST00000544299 NBPF12Q5TAG4 269 aaPredicted RBP20.87■□□□□ 0.93
CHERP-202ENST00000544299 TYW1BQ6NUM6 668 aa20.87■□□□□ 0.93
CHERP-202ENST00000544299 GMCL1P1Q8NEA9 526 aa20.87■□□□□ 0.93
CHERP-202ENST00000544299 GPKOWQ92917 476 aaPredicted RBP eCLIP20.87■□□□□ 0.93
CHERP-202ENST00000544299 FOXP1Q9H334 677 aaPredicted RBP20.87■□□□□ 0.93
CHERP-202ENST00000544299 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.87■□□□□ 0.93
CHERP-202ENST00000544299 RCOR1Q9UKL0 485 aa20.87■□□□□ 0.93
CHERP-202ENST00000544299 CFAP45Q9UL16 551 aa20.87■□□□□ 0.93
CHERP-202ENST00000544299 XBP1P17861 261 aa20.87■□□□□ 0.93
CHERP-202ENST00000544299 UBE2HP62256 183 aa20.87■□□□□ 0.93
CHERP-202ENST00000544299 NR5A1Q13285 461 aa20.87■□□□□ 0.93
CHERP-202ENST00000544299 SAFBQ15424 915 aaKnown RBP eCLIP20.87■□□□□ 0.93
CHERP-202ENST00000544299 GPR162Q16538 588 aa20.87■□□□□ 0.93
CHERP-202ENST00000544299 SLFN13Q68D06 897 aa20.87■□□□□ 0.93
CHERP-202ENST00000544299 WWC2Q6AWC2 1192 aa20.87■□□□□ 0.93
CHERP-202ENST00000544299 TTBK2Q6IQ55 1244 aa20.87■□□□□ 0.93
CHERP-202ENST00000544299 NOSTRINQ8IVI9 506 aa20.87■□□□□ 0.93
CHERP-202ENST00000544299 DCAF4Q8WV16 495 aa20.87■□□□□ 0.93
CHERP-202ENST00000544299 ANP32BQ92688 251 aaKnown RBP20.87■□□□□ 0.93
CHERP-202ENST00000544299 RTEL1Q9NZ71 1219 aa20.87■□□□□ 0.93
CHERP-202ENST00000544299 SYNPO2Q9UMS6 1093 aa20.87■□□□□ 0.93
CHERP-202ENST00000544299 ADAMTS3O15072 1205 aa20.86■□□□□ 0.93
CHERP-202ENST00000544299 CCDC96Q2M329 555 aa20.86■□□□□ 0.93
CHERP-202ENST00000544299 ACER1Q8TDN7 264 aa20.86■□□□□ 0.93
CHERP-202ENST00000544299 TNFRSF25Q93038 417 aa20.86■□□□□ 0.93
CHERP-202ENST00000544299 SH3GLB2Q9NR46 395 aa20.86■□□□□ 0.93
CHERP-202ENST00000544299 STXBP3O00186 592 aa20.85■□□□□ 0.93
CHERP-202ENST00000544299 NDUFB10O96000 172 aa20.85■□□□□ 0.93
CHERP-202ENST00000544299 NASPP49321 788 aaPredicted RBP20.85■□□□□ 0.93
CHERP-202ENST00000544299 CEBPZQ03701 1054 aaKnown RBP20.85■□□□□ 0.93
CHERP-202ENST00000544299 GPATCH4Q5T3I0 446 aaKnown RBP20.85■□□□□ 0.93
CHERP-202ENST00000544299 CAVIN1Q6NZI2 390 aaKnown RBP20.85■□□□□ 0.93
CHERP-202ENST00000544299 KCTD1Q719H9 257 aa20.85■□□□□ 0.93
CHERP-202ENST00000544299 PGBD1Q96JS3 809 aa20.85■□□□□ 0.93
CHERP-202ENST00000544299 PIGSQ96S52 555 aa20.85■□□□□ 0.93
CHERP-202ENST00000544299 ADARB2Q9NS39 739 aaKnown RBP20.85■□□□□ 0.93
CHERP-202ENST00000544299 CLIC4Q9Y696 253 aa20.85■□□□□ 0.93
CHERP-202ENST00000544299 SSC5DA1L4H1 1573 aa20.85■□□□□ 0.93
CHERP-202ENST00000544299 F5H6K3 240 aa20.85■□□□□ 0.93
CHERP-202ENST00000544299 LMOD1P29536 600 aaPredicted RBP20.85■□□□□ 0.93
CHERP-202ENST00000544299 KRT2P35908 639 aa20.85■□□□□ 0.93
CHERP-202ENST00000544299 ECE1P42892 770 aa20.85■□□□□ 0.93
CHERP-202ENST00000544299 KLRC3Q07444 240 aa20.85■□□□□ 0.93
CHERP-202ENST00000544299 GNL2Q13823 731 aaKnown RBP20.85■□□□□ 0.93
CHERP-202ENST00000544299 ZSCAN23Q3MJ62 389 aa20.85■□□□□ 0.93
CHERP-202ENST00000544299 RRP36Q96EU6 259 aaKnown RBP20.85■□□□□ 0.93
CHERP-202ENST00000544299 L3MBTL3Q96JM7 780 aaPredicted RBP20.85■□□□□ 0.93
CHERP-202ENST00000544299 POLR3EQ9NVU0 708 aa20.85■□□□□ 0.93
CHERP-202ENST00000544299 POLR2AP24928 1970 aaKnown RBP20.84■□□□□ 0.93
CHERP-202ENST00000544299 KIAA1755Q5JYT7 1200 aa20.84■□□□□ 0.93
CHERP-202ENST00000544299 MTMR8Q96EF0 704 aa20.84■□□□□ 0.93
CHERP-202ENST00000544299 GMCL1Q96IK5 515 aa20.84■□□□□ 0.93
CHERP-202ENST00000544299 JMJD4Q9H9V9 463 aa20.84■□□□□ 0.93
CHERP-202ENST00000544299 VAT1LQ9HCJ6 419 aa20.84■□□□□ 0.93
CHERP-202ENST00000544299 BARHL2Q9NY43 387 aa20.84■□□□□ 0.93
CHERP-202ENST00000544299 TMX2Q9Y320 296 aa20.84■□□□□ 0.93
CHERP-202ENST00000544299 PITPNM2Q9BZ72 1349 aa20.83■□□□□ 0.93
CHERP-202ENST00000544299 SLC1A4P43007 532 aa20.83■□□□□ 0.93
CHERP-202ENST00000544299 TOB1P50616 345 aaPredicted RBP20.83■□□□□ 0.93
CHERP-202ENST00000544299 EARS2Q5JPH6 523 aaKnown RBP20.83■□□□□ 0.93
CHERP-202ENST00000544299 PRAMEF18Q5VWM3 479 aa20.83■□□□□ 0.93
CHERP-202ENST00000544299 ARHGEF10LQ9HCE6 1279 aa20.83■□□□□ 0.93
CHERP-202ENST00000544299 DOCK1Q14185 1865 aa20.83■□□□□ 0.92
CHERP-202ENST00000544299 FAM205CA6NFA0 338 aa20.82■□□□□ 0.92
CHERP-202ENST00000544299 SLC16A2P36021 539 aa20.82■□□□□ 0.92
CHERP-202ENST00000544299 NOM1Q5C9Z4 860 aaKnown RBP20.82■□□□□ 0.92
CHERP-202ENST00000544299 ANO1Q5XXA6 986 aa20.82■□□□□ 0.92
CHERP-202ENST00000544299 HEATR3Q7Z4Q2 680 aa20.82■□□□□ 0.92
CHERP-202ENST00000544299 CCDC84Q86UT8 332 aaPredicted RBP20.82■□□□□ 0.92
CHERP-202ENST00000544299 HOMER1Q86YM7 354 aa20.82■□□□□ 0.92
CHERP-202ENST00000544299 ADGRF4Q8IZF3 695 aa20.82■□□□□ 0.92
CHERP-202ENST00000544299 LINC00301Q8NCQ3 95 aa20.82■□□□□ 0.92
CHERP-202ENST00000544299 NUP88Q99567 741 aaPredicted RBP20.82■□□□□ 0.92
CHERP-202ENST00000544299 PPP2R3BQ9Y5P8 575 aa20.82■□□□□ 0.92
CHERP-202ENST00000544299 ZC3H4Q9UPT8 1303 aaKnown RBP20.82■□□□□ 0.92
CHERP-202ENST00000544299 LETM1O95202 739 aaPredicted RBP20.82■□□□□ 0.92
CHERP-202ENST00000544299 YEATS4O95619 227 aa20.82■□□□□ 0.92
CHERP-202ENST00000544299 ASNSP08243 561 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms