RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 SMARCC1Q92922 1105 aaPredicted RBP5.3□□□□□ -1.56
SCFD1-207ENST00000544052 SGSM3Q96HU1 749 aa5.3□□□□□ -1.56
SCFD1-207ENST00000544052 KRTAP4-8Q9BYQ9 185 aa5.3□□□□□ -1.56
SCFD1-207ENST00000544052 PCDH12Q9NPG4 1184 aa5.3□□□□□ -1.56
SCFD1-207ENST00000544052 LRRN2O75325 713 aa5.3□□□□□ -1.56
SCFD1-207ENST00000544052 RXRBP28702 533 aa5.3□□□□□ -1.56
SCFD1-207ENST00000544052 MASP1P48740 699 aa5.3□□□□□ -1.56
SCFD1-207ENST00000544052 ZNF143P52747 638 aaPredicted RBP5.3□□□□□ -1.56
SCFD1-207ENST00000544052 LONRF2Q1L5Z9 754 aa5.3□□□□□ -1.56
SCFD1-207ENST00000544052 NKAPLQ5M9Q1 402 aa5.3□□□□□ -1.56
SCFD1-207ENST00000544052 SEZ6L2Q6UXD5 910 aa5.3□□□□□ -1.56
SCFD1-207ENST00000544052 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.3□□□□□ -1.56
SCFD1-207ENST00000544052 ZNF227Q86WZ6 799 aa5.3□□□□□ -1.56
SCFD1-207ENST00000544052 ARMC10Q8N2F6 343 aa5.3□□□□□ -1.56
SCFD1-207ENST00000544052 EZH1Q92800 747 aaPredicted RBP5.3□□□□□ -1.56
SCFD1-207ENST00000544052 BRF1Q92994 677 aa5.3□□□□□ -1.56
SCFD1-207ENST00000544052 MEGF10Q96KG7 1140 aa5.3□□□□□ -1.56
SCFD1-207ENST00000544052 PRDM10Q9NQV6 1147 aa5.3□□□□□ -1.56
SCFD1-207ENST00000544052 TPSG1Q9NRR2 321 aa5.3□□□□□ -1.56
SCFD1-207ENST00000544052 C1GALT1Q9NS00 363 aa5.3□□□□□ -1.56
SCFD1-207ENST00000544052 MBTPS1Q14703 1052 aa5.29□□□□□ -1.56
SCFD1-207ENST00000544052 ANKRD39Q53RE8 183 aa5.29□□□□□ -1.56
SCFD1-207ENST00000544052 C7orf61Q8IZ16 206 aa5.29□□□□□ -1.56
SCFD1-207ENST00000544052 BVESQ8NE79 360 aa5.29□□□□□ -1.56
SCFD1-207ENST00000544052 KISS1RQ969F8 398 aaPredicted RBP5.29□□□□□ -1.56
SCFD1-207ENST00000544052 UTP4Q969X6 686 aaKnown RBP5.29□□□□□ -1.56
SCFD1-207ENST00000544052 SLC26A8Q96RN1 970 aa5.29□□□□□ -1.56
SCFD1-207ENST00000544052 CDC6Q99741 560 aa5.29□□□□□ -1.56
SCFD1-207ENST00000544052 GP6Q9HCN6 339 aa5.29□□□□□ -1.56
SCFD1-207ENST00000544052 NOP58Q9Y2X3 529 aaKnown RBP5.29□□□□□ -1.56
SCFD1-207ENST00000544052 PRKAB1Q9Y478 270 aa5.29□□□□□ -1.56
SCFD1-207ENST00000544052 C9orf172C9J069 976 aa5.28□□□□□ -1.56
SCFD1-207ENST00000544052 LEFTY1O75610 366 aa5.28□□□□□ -1.56
SCFD1-207ENST00000544052 RAPGEF3O95398 923 aa5.28□□□□□ -1.56
SCFD1-207ENST00000544052 IBSPP21815 317 aaPredicted RBP5.28□□□□□ -1.56
SCFD1-207ENST00000544052 IGBP1P78318 339 aa5.28□□□□□ -1.56
SCFD1-207ENST00000544052 AMPD3Q01432 767 aa5.28□□□□□ -1.56
SCFD1-207ENST00000544052 NRG1Q02297 640 aaPredicted RBP5.28□□□□□ -1.56
SCFD1-207ENST00000544052 HSP90AA2PQ14568 343 aaPredicted RBP5.28□□□□□ -1.56
SCFD1-207ENST00000544052 SF1Q15637 639 aaKnown RBP5.28□□□□□ -1.56
SCFD1-207ENST00000544052 DHX37Q8IY37 1157 aaKnown RBP5.28□□□□□ -1.56
SCFD1-207ENST00000544052 DZIP1LQ8IYY4 767 aaKnown RBP5.28□□□□□ -1.56
SCFD1-207ENST00000544052 MYRFLQ96LU7 910 aa5.28□□□□□ -1.56
SCFD1-207ENST00000544052 CLUHP3Q96NS8 147 aa5.28□□□□□ -1.56
SCFD1-207ENST00000544052 FBXL21Q9UKT6 434 aa5.28□□□□□ -1.56
SCFD1-207ENST00000544052 MRPS23Q9Y3D9 190 aaKnown RBP5.28□□□□□ -1.56
SCFD1-207ENST00000544052 TRAV20A0A0B4J274 112 aa5.28□□□□□ -1.56
SCFD1-207ENST00000544052 IRS4O14654 1257 aaPredicted RBP5.28□□□□□ -1.56
SCFD1-207ENST00000544052 PPM1BO75688 479 aa5.28□□□□□ -1.56
SCFD1-207ENST00000544052 EOMESO95936 686 aa5.28□□□□□ -1.56
SCFD1-207ENST00000544052 NAT2P11245 290 aa5.28□□□□□ -1.56
SCFD1-207ENST00000544052 MAP4P27816 1152 aaKnown RBP5.28□□□□□ -1.56
SCFD1-207ENST00000544052 ZNF445P59923 1031 aa5.28□□□□□ -1.56
SCFD1-207ENST00000544052 NFKBIBQ15653 356 aa5.28□□□□□ -1.56
SCFD1-207ENST00000544052 NBPF9Q3BBW0 867 aa5.28□□□□□ -1.56
SCFD1-207ENST00000544052 TOP6BLQ8N6T0 577 aa5.28□□□□□ -1.56
SCFD1-207ENST00000544052 AARSD1Q9BTE6 412 aaKnown RBP5.28□□□□□ -1.56
SCFD1-207ENST00000544052 DHRS4Q9BTZ2 278 aa5.28□□□□□ -1.56
SCFD1-207ENST00000544052 GBP3Q9H0R5 595 aa5.28□□□□□ -1.56
SCFD1-207ENST00000544052 KCNF1Q9H3M0 494 aa5.28□□□□□ -1.56
SCFD1-207ENST00000544052 NCOA5Q9HCD5 579 aaKnown RBP5.28□□□□□ -1.56
SCFD1-207ENST00000544052 WHRNQ9P202 907 aa5.28□□□□□ -1.56
SCFD1-207ENST00000544052 TPX2Q9ULW0 747 aaKnown RBP5.28□□□□□ -1.56
SCFD1-207ENST00000544052 MINPP1Q9UNW1 487 aa5.28□□□□□ -1.56
SCFD1-207ENST00000544052 FAM95CA0A1B0GW59 222 aa5.27□□□□□ -1.57
SCFD1-207ENST00000544052 DYRK3O43781 588 aa5.27□□□□□ -1.57
SCFD1-207ENST00000544052 CAPNS1P04632 268 aa5.27□□□□□ -1.57
SCFD1-207ENST00000544052 PABPC4Q13310 644 aaKnown RBP eCLIP5.27□□□□□ -1.573e-10■■■□□ 16.3
SCFD1-207ENST00000544052 MAP7Q14244 749 aa5.27□□□□□ -1.57
SCFD1-207ENST00000544052 ADGRE1Q14246 886 aa5.27□□□□□ -1.57
SCFD1-207ENST00000544052 PPP2R5DQ14738 602 aa5.27□□□□□ -1.57
SCFD1-207ENST00000544052 NOL9Q5SY16 702 aaKnown RBP5.27□□□□□ -1.57
SCFD1-207ENST00000544052 SYNPOQ8N3V7 929 aa5.27□□□□□ -1.57
SCFD1-207ENST00000544052 FBXL18Q96ME1 805 aa5.27□□□□□ -1.57
SCFD1-207ENST00000544052 IER2Q9BTL4 223 aa5.27□□□□□ -1.57
SCFD1-207ENST00000544052 DUSP23Q9BVJ7 150 aa5.27□□□□□ -1.57
SCFD1-207ENST00000544052 PRDM14Q9GZV8 571 aa5.27□□□□□ -1.57
SCFD1-207ENST00000544052 NOL6Q9H6R4 1146 aaKnown RBP5.27□□□□□ -1.57
SCFD1-207ENST00000544052 AKT3Q9Y243 479 aa5.27□□□□□ -1.57
SCFD1-207ENST00000544052 PCDHB12Q9Y5F1 795 aa5.27□□□□□ -1.57
SCFD1-207ENST00000544052 MYO15BQ96JP2 1530 aa5.27□□□□□ -1.57
SCFD1-207ENST00000544052 TRBV23-1A0A0A0MS06 115 aa5.27□□□□□ -1.57
SCFD1-207ENST00000544052 SCO2A0A1W2PP80 73 aa5.27□□□□□ -1.57
SCFD1-207ENST00000544052 PRODHO43272 600 aa5.27□□□□□ -1.57
SCFD1-207ENST00000544052 RAB11FIP3O75154 756 aa5.27□□□□□ -1.57
SCFD1-207ENST00000544052 ETV3P41162 512 aa5.27□□□□□ -1.57
SCFD1-207ENST00000544052 ANAPC15P60006 121 aa5.27□□□□□ -1.57
SCFD1-207ENST00000544052 FAM20CQ8IXL6 584 aa5.27□□□□□ -1.57
SCFD1-207ENST00000544052 NIM1KQ8IY84 436 aa5.27□□□□□ -1.57
SCFD1-207ENST00000544052 ZCRB1Q8TBF4 217 aaKnown RBP5.27□□□□□ -1.57
SCFD1-207ENST00000544052 RNF141Q8WVD5 230 aa5.27□□□□□ -1.57
SCFD1-207ENST00000544052 BTN2A2Q8WVV5 523 aa5.27□□□□□ -1.57
SCFD1-207ENST00000544052 NINJ1Q92982 152 aa5.27□□□□□ -1.57
SCFD1-207ENST00000544052 MRGPRX3Q96LB0 322 aa5.27□□□□□ -1.57
SCFD1-207ENST00000544052 YIPF2Q9BWQ6 316 aa5.27□□□□□ -1.57
SCFD1-207ENST00000544052 CGGBP1Q9UFW8 167 aaPredicted RBP5.27□□□□□ -1.57
SCFD1-207ENST00000544052 EMC9Q9Y3B6 208 aa5.27□□□□□ -1.57
SCFD1-207ENST00000544052 NOP56O00567 594 aaKnown RBP5.26□□□□□ -1.57
SCFD1-207ENST00000544052 KCNH1O95259 989 aa5.26□□□□□ -1.57
SCFD1-207ENST00000544052 PABPC1P11940 636 aaKnown RBP5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms