RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 A1CFQ9NQ94 594 aaKnown RBP14.17□□□□□ -0.14
SMG8-202ENST00000543872 VPS54Q9P1Q0 977 aa14.17□□□□□ -0.14
SMG8-202ENST00000543872 KCNJ18B7U540 433 aa14.17□□□□□ -0.14
SMG8-202ENST00000543872 PPP1R12BO60237 982 aaPredicted RBP14.17□□□□□ -0.14
SMG8-202ENST00000543872 KCNJ12Q14500 433 aa14.17□□□□□ -0.14
SMG8-202ENST00000543872 CCDC181Q5TID7 509 aa14.17□□□□□ -0.14
SMG8-202ENST00000543872 IQCEQ6IPM2 695 aa14.17□□□□□ -0.14
SMG8-202ENST00000543872 FBXL16Q8N461 479 aa14.17□□□□□ -0.14
SMG8-202ENST00000543872 OXER1Q8TDS5 423 aa14.17□□□□□ -0.14
SMG8-202ENST00000543872 BORCS6Q96GS4 357 aa14.17□□□□□ -0.14
SMG8-202ENST00000543872 CCDC85AQ96PX6 553 aaPredicted RBP14.17□□□□□ -0.14
SMG8-202ENST00000543872 CCT8L2Q96SF2 557 aa14.17□□□□□ -0.14
SMG8-202ENST00000543872 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.17□□□□□ -0.14
SMG8-202ENST00000543872 GOLGA6L7A0A1B0GV03 622 aa14.17□□□□□ -0.14
SMG8-202ENST00000543872 BACH1O14867 736 aa14.17□□□□□ -0.14
SMG8-202ENST00000543872 GPAA1O43292 621 aa14.17□□□□□ -0.14
SMG8-202ENST00000543872 CFAP58Q5T655 872 aa14.17□□□□□ -0.14
SMG8-202ENST00000543872 CCDC121Q6ZUS5 278 aa14.17□□□□□ -0.14
SMG8-202ENST00000543872 CCDC43Q96MW1 224 aaKnown RBP14.17□□□□□ -0.14
SMG8-202ENST00000543872 FAM205CA6NFA0 338 aa14.16□□□□□ -0.14
SMG8-202ENST00000543872 GUCY2FP51841 1108 aa14.16□□□□□ -0.14
SMG8-202ENST00000543872 SF3A3Q12874 501 aaKnown RBP eCLIP14.16□□□□□ -0.14
SMG8-202ENST00000543872 TICAM2Q86XR7 235 aa14.16□□□□□ -0.14
SMG8-202ENST00000543872 GCFC2P16383 781 aaKnown RBP14.16□□□□□ -0.14
SMG8-202ENST00000543872 GBP2P32456 591 aaPredicted RBP14.16□□□□□ -0.14
SMG8-202ENST00000543872 SMTNP53814 917 aa14.16□□□□□ -0.14
SMG8-202ENST00000543872 SNCBQ16143 134 aa14.16□□□□□ -0.14
SMG8-202ENST00000543872 RRP12Q5JTH9 1297 aaKnown RBP14.16□□□□□ -0.14
SMG8-202ENST00000543872 TBC1D10CQ8IV04 446 aa14.16□□□□□ -0.14
SMG8-202ENST00000543872 XAGE2Q96GT9 111 aa14.16□□□□□ -0.14
SMG8-202ENST00000543872 PUS3Q9BZE2 481 aaKnown RBP14.16□□□□□ -0.14
SMG8-202ENST00000543872 DDX20Q9UHI6 824 aaKnown RBP14.16□□□□□ -0.14
SMG8-202ENST00000543872 SRPRBQ9Y5M8 271 aaKnown RBP14.16□□□□□ -0.14
SMG8-202ENST00000543872 SLC12A7Q9Y666 1083 aa14.16□□□□□ -0.14
SMG8-202ENST00000543872 ANKARQ7Z5J8 1434 aa14.16□□□□□ -0.14
SMG8-202ENST00000543872 ESYT3A0FGR9 886 aa14.16□□□□□ -0.14
SMG8-202ENST00000543872 KRT83P78385 493 aa14.16□□□□□ -0.14
SMG8-202ENST00000543872 RILPL1Q5EBL4 403 aa14.16□□□□□ -0.14
SMG8-202ENST00000543872 ATG9AQ7Z3C6 839 aa14.16□□□□□ -0.14
SMG8-202ENST00000543872 EPN3Q9H201 632 aa14.16□□□□□ -0.14
SMG8-202ENST00000543872 VCPKMTQ9H867 229 aa14.16□□□□□ -0.14
SMG8-202ENST00000543872 LRRC37A3O60309 1634 aa14.16□□□□□ -0.14
SMG8-202ENST00000543872 DIP2CQ9Y2E4 1556 aa14.15□□□□□ -0.14
SMG8-202ENST00000543872 SH2B2O14492 632 aaPredicted RBP14.15□□□□□ -0.14
SMG8-202ENST00000543872 ZPR1O75312 459 aa14.15□□□□□ -0.14
SMG8-202ENST00000543872 EZRP15311 586 aaKnown RBP14.15□□□□□ -0.14
SMG8-202ENST00000543872 ADORA1P30542 326 aa14.15□□□□□ -0.14
SMG8-202ENST00000543872 SSR1P43307 286 aaKnown RBP14.15□□□□□ -0.14
SMG8-202ENST00000543872 SKOR1P84550 965 aa14.15□□□□□ -0.14
SMG8-202ENST00000543872 NLRP14Q86W24 1093 aa14.15□□□□□ -0.14
SMG8-202ENST00000543872 SYMPKQ92797 1274 aaKnown RBP14.15□□□□□ -0.14
SMG8-202ENST00000543872 ZKSCAN3Q9BRR0 538 aa14.15□□□□□ -0.14
SMG8-202ENST00000543872 ITIH6Q6UXX5 1313 aa14.15□□□□□ -0.14
SMG8-202ENST00000543872 IFIT3O14879 490 aaKnown RBP14.15□□□□□ -0.14
SMG8-202ENST00000543872 FECHP22830 423 aa14.15□□□□□ -0.14
SMG8-202ENST00000543872 NTRK3Q16288 839 aa14.15□□□□□ -0.14
SMG8-202ENST00000543872 CCDC96Q2M329 555 aa14.15□□□□□ -0.14
SMG8-202ENST00000543872 TCP11X2Q5H9J9 407 aa14.15□□□□□ -0.14
SMG8-202ENST00000543872 NBPF10Q6P3W6 841 aaKnown RBP14.15□□□□□ -0.14
SMG8-202ENST00000543872 ELOA2Q8IYF1 753 aaPredicted RBP14.15□□□□□ -0.14
SMG8-202ENST00000543872 TEX11Q8IYF3 940 aa14.15□□□□□ -0.14
SMG8-202ENST00000543872 NELFBQ8WX92 580 aa14.15□□□□□ -0.14
SMG8-202ENST00000543872 HAUS2Q9NVX0 235 aa14.15□□□□□ -0.14
SMG8-202ENST00000543872 ZAP70P43403 619 aa14.14□□□□□ -0.15
SMG8-202ENST00000543872 KRT26Q7Z3Y9 468 aa14.14□□□□□ -0.15
SMG8-202ENST00000543872 SPATA4Q8NEY3 305 aa14.14□□□□□ -0.15
SMG8-202ENST00000543872 NUP133Q8WUM0 1156 aa14.14□□□□□ -0.15
SMG8-202ENST00000543872 MMP1P03956 469 aa14.14□□□□□ -0.15
SMG8-202ENST00000543872 EPHB4P54760 987 aa14.14□□□□□ -0.15
SMG8-202ENST00000543872 FAM69CQ0P6D2 419 aa14.14□□□□□ -0.15
SMG8-202ENST00000543872 KIF5AQ12840 1032 aa14.14□□□□□ -0.15
SMG8-202ENST00000543872 SCARF1Q14162 830 aa14.14□□□□□ -0.15
SMG8-202ENST00000543872 MAATS1Q7Z4T9 603 aa14.14□□□□□ -0.15
SMG8-202ENST00000543872 PARP9Q8IXQ6 854 aa14.14□□□□□ -0.15
SMG8-202ENST00000543872 EHBP1Q8NDI1 1231 aa14.14□□□□□ -0.15
SMG8-202ENST00000543872 SPATA20Q8TB22 786 aa14.14□□□□□ -0.15
SMG8-202ENST00000543872 NOC3LQ8WTT2 800 aaKnown RBP14.14□□□□□ -0.15
SMG8-202ENST00000543872 ZNHIT6Q9NWK9 470 aaKnown RBP14.14□□□□□ -0.15
SMG8-202ENST00000543872 LIMA1Q9UHB6 759 aaKnown RBP14.14□□□□□ -0.15
SMG8-202ENST00000543872 hCG_1642624A0A1W2PR95 340 aa14.14□□□□□ -0.15
SMG8-202ENST00000543872 PPP1R37O75864 691 aa14.14□□□□□ -0.15
SMG8-202ENST00000543872 NR1D1P20393 614 aa14.14□□□□□ -0.15
SMG8-202ENST00000543872 CCNHP51946 323 aaPredicted RBP14.14□□□□□ -0.15
SMG8-202ENST00000543872 TBC1D8BQ0IIM8 1120 aa14.14□□□□□ -0.15
SMG8-202ENST00000543872 ALS2CLQ60I27 953 aa14.14□□□□□ -0.15
SMG8-202ENST00000543872 SPATS2Q86XZ4 545 aaKnown RBP14.14□□□□□ -0.15
SMG8-202ENST00000543872 TRIM22Q8IYM9 498 aa14.14□□□□□ -0.15
SMG8-202ENST00000543872 MYCBPAPQ8TBZ2 947 aa14.14□□□□□ -0.15
SMG8-202ENST00000543872 TBC1D31Q96DN5 1066 aa14.14□□□□□ -0.15
SMG8-202ENST00000543872 TRIM6Q9C030 488 aaPredicted RBP14.14□□□□□ -0.15
SMG8-202ENST00000543872 FAM217BQ9NTX9 383 aaPredicted RBP14.14□□□□□ -0.15
SMG8-202ENST00000543872 NFU1Q9UMS0 254 aa14.14□□□□□ -0.15
SMG8-202ENST00000543872 CYLC1P35663 651 aaPredicted RBP14.13□□□□□ -0.15
SMG8-202ENST00000543872 PAK1Q13153 545 aa14.13□□□□□ -0.15
SMG8-202ENST00000543872 TRIM14Q14142 442 aa14.13□□□□□ -0.15
SMG8-202ENST00000543872 PTGISQ16647 500 aa14.13□□□□□ -0.15
SMG8-202ENST00000543872 NFRKBQ6P4R8 1299 aa14.13□□□□□ -0.15
SMG8-202ENST00000543872 AGPAT5Q9NUQ2 364 aa14.13□□□□□ -0.15
SMG8-202ENST00000543872 A0A1B0GUA9 196 aa14.13□□□□□ -0.15
SMG8-202ENST00000543872 TRIM49BA6NDI0 452 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms