RNA–Protein interactions for RNA: ENST00000543324.1

CIT-213, Transcript of citron rho-interacting serine/threonine kinase, human

TSL 3

Gene CIT, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIT-213	ENST00000543324	SUGT1	Q9Y2Z0	365 aa		7.94	□□□□□ -1.14
CIT-213	ENST00000543324	PDS5A	Q29RF7	1337 aa	Known RBP	7.94	□□□□□ -1.14
CIT-213	ENST00000543324	SALL1	Q9NSC2	1324 aa		7.94	□□□□□ -1.14
CIT-213	ENST00000543324	LOC285556	D6RIA3	1793 aa		7.94	□□□□□ -1.14
CIT-213	ENST00000543324		H3BQ06	376 aa	Predicted RBP	7.93	□□□□□ -1.14
CIT-213	ENST00000543324	UBTFL1	P0CB47	393 aa	Predicted RBP	7.93	□□□□□ -1.14
CIT-213	ENST00000543324	TRIM27	P14373	513 aa		7.93	□□□□□ -1.14
CIT-213	ENST00000543324	CRK	P46108	304 aa		7.93	□□□□□ -1.14
CIT-213	ENST00000543324	TAP1	Q03518	808 aa		7.93	□□□□□ -1.14
CIT-213	ENST00000543324	LRRC41	Q15345	812 aa		7.93	□□□□□ -1.14
CIT-213	ENST00000543324	TMEM67	Q5HYA8	995 aa		7.93	□□□□□ -1.14
CIT-213	ENST00000543324	TREML2	Q5T2D2	321 aa		7.93	□□□□□ -1.14
CIT-213	ENST00000543324	MFSD14C	Q5VZR4	134 aa		7.93	□□□□□ -1.14
CIT-213	ENST00000543324	MIGA2	Q7L4E1	593 aa		7.93	□□□□□ -1.14
CIT-213	ENST00000543324	DZIP1L	Q8IYY4	767 aa	Known RBP	7.93	□□□□□ -1.14
CIT-213	ENST00000543324	TRPV1	Q8NER1	839 aa		7.93	□□□□□ -1.14
CIT-213	ENST00000543324	TBC1D22A	Q8WUA7	517 aa		7.93	□□□□□ -1.14
CIT-213	ENST00000543324	LPIN2	Q92539	896 aa		7.93	□□□□□ -1.14
CIT-213	ENST00000543324	ZDHHC15	Q96MV8	337 aa		7.93	□□□□□ -1.14
CIT-213	ENST00000543324	POP1	Q99575	1024 aa	Known RBP	7.93	□□□□□ -1.14
CIT-213	ENST00000543324	IL23A	Q9NPF7	189 aa		7.93	□□□□□ -1.14
CIT-213	ENST00000543324	FLRT1	Q9NZU1	646 aa		7.93	□□□□□ -1.14
CIT-213	ENST00000543324	TTF2	Q9UNY4	1162 aa	Known RBP	7.93	□□□□□ -1.14
CIT-213	ENST00000543324	PHF24	Q9UPV7	400 aa		7.93	□□□□□ -1.14
CIT-213	ENST00000543324	AFG3L2	Q9Y4W6	797 aa		7.93	□□□□□ -1.14
CIT-213	ENST00000543324	LRRFIP2	Q9Y608	721 aa	Known RBP	7.93	□□□□□ -1.14
CIT-213	ENST00000543324	ANKRD17	O75179	2603 aa	Known RBP	7.93	□□□□□ -1.14
CIT-213	ENST00000543324	ARHGEF15	O94989	841 aa		7.92	□□□□□ -1.14
CIT-213	ENST00000543324	FGB	P02675	491 aa		7.92	□□□□□ -1.14
CIT-213	ENST00000543324	CYBA	P13498	195 aa		7.92	□□□□□ -1.14
CIT-213	ENST00000543324	SIGLEC14	Q08ET2	396 aa		7.92	□□□□□ -1.14
CIT-213	ENST00000543324	FKBP1C	Q5VVH2	108 aa		7.92	□□□□□ -1.14
CIT-213	ENST00000543324	APOBEC3H	Q6NTF7	200 aa	Known RBP	7.92	□□□□□ -1.14
CIT-213	ENST00000543324	FAM83A	Q86UY5	434 aa		7.92	□□□□□ -1.14
CIT-213	ENST00000543324	TNN	Q9UQP3	1299 aa		7.92	□□□□□ -1.14
CIT-213	ENST00000543324	SLC4A7	Q9Y6M7	1214 aa		7.92	□□□□□ -1.14
CIT-213	ENST00000543324	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	7.92	□□□□□ -1.14
CIT-213	ENST00000543324	ZHX2	Q9Y6X8	837 aa		7.92	□□□□□ -1.14
CIT-213	ENST00000543324	LOC400499	M0QZD8	3231 aa		7.92	□□□□□ -1.14
CIT-213	ENST00000543324	DCDC2C	A8MYV0	355 aa		7.91	□□□□□ -1.14
CIT-213	ENST00000543324	APBB1	O00213	710 aa		7.91	□□□□□ -1.14
CIT-213	ENST00000543324	SEMA3E	O15041	775 aa		7.91	□□□□□ -1.14
CIT-213	ENST00000543324	IFIT1	P09914	478 aa	Known RBP	7.91	□□□□□ -1.14
CIT-213	ENST00000543324	IL15	P40933	162 aa	Predicted RBP	7.91	□□□□□ -1.14
CIT-213	ENST00000543324	ATXN1	P54253	815 aa	Known RBP	7.91	□□□□□ -1.14
CIT-213	ENST00000543324	CACNB3	P54284	484 aa		7.91	□□□□□ -1.14
CIT-213	ENST00000543324	IRX6	P78412	446 aa	Predicted RBP	7.91	□□□□□ -1.14
CIT-213	ENST00000543324	CAVIN4	Q5BKX8	364 aa		7.91	□□□□□ -1.14
CIT-213	ENST00000543324	HHIPL2	Q6UWX4	724 aa		7.91	□□□□□ -1.14
CIT-213	ENST00000543324	ATF7IP	Q6VMQ6	1270 aa		7.91	□□□□□ -1.14
CIT-213	ENST00000543324	OTOP2	Q7RTS6	562 aa		7.91	□□□□□ -1.14
CIT-213	ENST00000543324	HNRNPAB	Q99729	332 aa	Known RBP	7.91	□□□□□ -1.14
CIT-213	ENST00000543324	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	7.91	□□□□□ -1.14
CIT-213	ENST00000543324	PA2G4	Q9UQ80	394 aa	Known RBP	7.91	□□□□□ -1.14
CIT-213	ENST00000543324	MAST3	O60307	1309 aa		7.91	□□□□□ -1.14
CIT-213	ENST00000543324	MYH7	P12883	1935 aa		7.91	□□□□□ -1.14
CIT-213	ENST00000543324	PTPN13	Q12923	2485 aa		7.91	□□□□□ -1.14
CIT-213	ENST00000543324	TNKS	O95271	1327 aa		7.9	□□□□□ -1.14
CIT-213	ENST00000543324	BCAR3	O75815	825 aa		7.9	□□□□□ -1.14
CIT-213	ENST00000543324	IGHA2	P01877	340 aa		7.9	□□□□□ -1.14
CIT-213	ENST00000543324	GNAI3	P08754	354 aa		7.9	□□□□□ -1.14
CIT-213	ENST00000543324	ATP2A2	P16615	1042 aa	Known RBP	7.9	□□□□□ -1.14
CIT-213	ENST00000543324	MAPK4	P31152	587 aa		7.9	□□□□□ -1.14
CIT-213	ENST00000543324	ATP2B3	Q16720	1220 aa		7.9	□□□□□ -1.14
CIT-213	ENST00000543324	ANO1	Q5XXA6	986 aa		7.9	□□□□□ -1.14
CIT-213	ENST00000543324	B4GALNT3	Q6L9W6	998 aa		7.9	□□□□□ -1.14
CIT-213	ENST00000543324	LRSAM1	Q6UWE0	723 aa		7.9	□□□□□ -1.14
CIT-213	ENST00000543324	SPRED2	Q7Z698	418 aa		7.9	□□□□□ -1.14
CIT-213	ENST00000543324	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	7.9	□□□□□ -1.14
CIT-213	ENST00000543324	WDR66	Q8TBY9	1149 aa		7.9	□□□□□ -1.14
CIT-213	ENST00000543324	TEKT1	Q969V4	418 aa		7.9	□□□□□ -1.14
CIT-213	ENST00000543324	ZBTB47	Q9UFB7	747 aa	Predicted RBP	7.9	□□□□□ -1.14
CIT-213	ENST00000543324	MYH1	P12882	1939 aa		7.9	□□□□□ -1.15
CIT-213	ENST00000543324		A0A1W2PQ45	241 aa	Predicted RBP	7.89	□□□□□ -1.15
CIT-213	ENST00000543324		A0A1W2PQY0	241 aa		7.89	□□□□□ -1.15
CIT-213	ENST00000543324	LMNA	P02545	664 aa	Known RBP	7.89	□□□□□ -1.15
CIT-213	ENST00000543324	PTPRA	P18433	802 aa		7.89	□□□□□ -1.15
CIT-213	ENST00000543324	SDHB	P21912	280 aa		7.89	□□□□□ -1.15
CIT-213	ENST00000543324	PRDX5	P30044	214 aa		7.89	□□□□□ -1.15
CIT-213	ENST00000543324	PHKA1	P46020	1223 aa		7.89	□□□□□ -1.15
CIT-213	ENST00000543324	CHAF1A	Q13111	956 aa	Predicted RBP	7.89	□□□□□ -1.15
CIT-213	ENST00000543324	RASGRF1	Q13972	1273 aa		7.89	□□□□□ -1.15
CIT-213	ENST00000543324	SMAD2	Q15796	467 aa	Known RBP	7.89	□□□□□ -1.15
CIT-213	ENST00000543324	PRR23B	Q6ZRT6	265 aa		7.89	□□□□□ -1.15
CIT-213	ENST00000543324	GPR142	Q7Z601	462 aa		7.89	□□□□□ -1.15
CIT-213	ENST00000543324	VPS37D	Q86XT2	251 aa		7.89	□□□□□ -1.15
CIT-213	ENST00000543324	ZNF384	Q8TF68	577 aa		7.89	□□□□□ -1.15
CIT-213	ENST00000543324	GDPD5	Q8WTR4	605 aa		7.89	□□□□□ -1.15
CIT-213	ENST00000543324	UBE2Q2	Q8WVN8	375 aa		7.89	□□□□□ -1.15
CIT-213	ENST00000543324	SIL1	Q9H173	461 aa		7.89	□□□□□ -1.15
CIT-213	ENST00000543324	HDAC5	Q9UQL6	1122 aa		7.89	□□□□□ -1.15
CIT-213	ENST00000543324	MYO18B	Q8IUG5	2567 aa		7.89	□□□□□ -1.15
CIT-213	ENST00000543324	DSP	P15924	2871 aa	Known RBP	7.89	□□□□□ -1.15
CIT-213	ENST00000543324	PNMA6E	A0A0J9YXQ4	647 aa		7.88	□□□□□ -1.15
CIT-213	ENST00000543324	SEPT4	O43236	478 aa		7.88	□□□□□ -1.15
CIT-213	ENST00000543324	ADORA1	P30542	326 aa		7.88	□□□□□ -1.15
CIT-213	ENST00000543324	CYP2C19	P33261	490 aa		7.88	□□□□□ -1.15
CIT-213	ENST00000543324	MKRN4P	Q13434	485 aa	Predicted RBP	7.88	□□□□□ -1.15
CIT-213	ENST00000543324	CCDC102B	Q68D86	513 aa		7.88	□□□□□ -1.15
CIT-213	ENST00000543324	SCYL3	Q8IZE3	742 aa		7.88	□□□□□ -1.15

Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms