RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 CDHR2Q9BYE9 1310 aa12.65□□□□□ -0.38
CDH4-201ENST00000543233 LMOD1P29536 600 aaPredicted RBP12.65□□□□□ -0.38
CDH4-201ENST00000543233 MARCKSP29966 332 aaPredicted RBP12.65□□□□□ -0.38
CDH4-201ENST00000543233 ADD2P35612 726 aa12.65□□□□□ -0.38
CDH4-201ENST00000543233 STK38Q15208 465 aa12.65□□□□□ -0.38
CDH4-201ENST00000543233 SLC5A9Q2M3M2 681 aa12.65□□□□□ -0.38
CDH4-201ENST00000543233 CYB5R4Q7L1T6 521 aa12.65□□□□□ -0.38
CDH4-201ENST00000543233 EZH1Q92800 747 aaPredicted RBP12.65□□□□□ -0.38
CDH4-201ENST00000543233 JAG2Q9Y219 1238 aa12.65□□□□□ -0.38
CDH4-201ENST00000543233 RIC1Q4ADV7 1423 aa12.65□□□□□ -0.39
CDH4-201ENST00000543233 LOC102724428A0A0B4J2F2 783 aa12.64□□□□□ -0.39
CDH4-201ENST00000543233 EIF4E1BA6NMX2 242 aaKnown RBP12.64□□□□□ -0.39
CDH4-201ENST00000543233 BIN1O00499 593 aa12.64□□□□□ -0.39
CDH4-201ENST00000543233 MAFGO15525 162 aa12.64□□□□□ -0.39
CDH4-201ENST00000543233 MEFVO15553 781 aaPredicted RBP12.64□□□□□ -0.39
CDH4-201ENST00000543233 SIK1P57059 783 aa12.64□□□□□ -0.39
CDH4-201ENST00000543233 ITPK1Q13572 414 aa12.64□□□□□ -0.39
CDH4-201ENST00000543233 KIF4BQ2VIQ3 1234 aa12.64□□□□□ -0.39
CDH4-201ENST00000543233 ARL10Q8N8L6 244 aa12.64□□□□□ -0.39
CDH4-201ENST00000543233 SDF4Q9BRK5 362 aa12.64□□□□□ -0.39
CDH4-201ENST00000543233 DESI2Q9BSY9 194 aa12.64□□□□□ -0.39
CDH4-201ENST00000543233 CLIC4Q9Y696 253 aa12.64□□□□□ -0.39
CDH4-201ENST00000543233 RFX7Q2KHR2 1363 aa12.64□□□□□ -0.39
CDH4-201ENST00000543233 BUB1BO60566 1050 aaPredicted RBP12.64□□□□□ -0.39
CDH4-201ENST00000543233 CDKL5O76039 1030 aa12.64□□□□□ -0.39
CDH4-201ENST00000543233 FSBPO95073 299 aa12.64□□□□□ -0.39
CDH4-201ENST00000543233 TPP2P29144 1249 aaPredicted RBP12.64□□□□□ -0.39
CDH4-201ENST00000543233 SF3B2Q13435 895 aaKnown RBP12.64□□□□□ -0.39
CDH4-201ENST00000543233 SLC4A8Q2Y0W8 1093 aa12.64□□□□□ -0.39
CDH4-201ENST00000543233 GNPTABQ3T906 1256 aa12.64□□□□□ -0.39
CDH4-201ENST00000543233 PARP9Q8IXQ6 854 aa12.64□□□□□ -0.39
CDH4-201ENST00000543233 IRX2Q9BZI1 471 aaPredicted RBP12.64□□□□□ -0.39
CDH4-201ENST00000543233 TSGA10Q9BZW7 698 aa12.64□□□□□ -0.39
CDH4-201ENST00000543233 LZTFL1Q9NQ48 299 aa12.64□□□□□ -0.39
CDH4-201ENST00000543233 CCDC87Q9NVE4 849 aa12.64□□□□□ -0.39
CDH4-201ENST00000543233 LRP2BPQ9P2M1 347 aa12.64□□□□□ -0.39
CDH4-201ENST00000543233 SMIM22K7EJ46 135 aa12.64□□□□□ -0.39
CDH4-201ENST00000543233 IL6STP40189 918 aaPredicted RBP12.64□□□□□ -0.39
CDH4-201ENST00000543233 PUM3Q15397 648 aaKnown RBP12.64□□□□□ -0.39
CDH4-201ENST00000543233 ILDR1Q86SU0 546 aaPredicted RBP12.64□□□□□ -0.39
CDH4-201ENST00000543233 MB21D2Q8IYB1 491 aaPredicted RBP12.64□□□□□ -0.39
CDH4-201ENST00000543233 MARCH10Q8NA82 808 aaPredicted RBP12.64□□□□□ -0.39
CDH4-201ENST00000543233 SPATA5Q8NB90 893 aa12.64□□□□□ -0.39
CDH4-201ENST00000543233 LLPHQ9BRT6 129 aaKnown RBP12.64□□□□□ -0.39
CDH4-201ENST00000543233 PLA2G12BQ9BX93 195 aa12.64□□□□□ -0.39
CDH4-201ENST00000543233 NAPBQ9H115 298 aa12.64□□□□□ -0.39
CDH4-201ENST00000543233 BCL9O00512 1426 aa12.63□□□□□ -0.39
CDH4-201ENST00000543233 CUTAO60888 179 aa12.63□□□□□ -0.39
CDH4-201ENST00000543233 SYF2O95926 243 aaKnown RBP12.63□□□□□ -0.39
CDH4-201ENST00000543233 TFRCP02786 760 aaKnown RBP12.63□□□□□ -0.39
CDH4-201ENST00000543233 CFAP100Q494V2 611 aa12.63□□□□□ -0.39
CDH4-201ENST00000543233 MEX3CQ5U5Q3 659 aaKnown RBP12.63□□□□□ -0.39
CDH4-201ENST00000543233 SLC30A9Q6PML9 568 aa12.63□□□□□ -0.39
CDH4-201ENST00000543233 RBM43Q6ZSC3 357 aaKnown RBP12.63□□□□□ -0.39
CDH4-201ENST00000543233 MICALCLQ6ZW33 695 aa12.63□□□□□ -0.39
CDH4-201ENST00000543233 KIAA0825Q8IV33 1275 aa12.63□□□□□ -0.39
CDH4-201ENST00000543233 ZNF274Q96GC6 653 aaPredicted RBP12.63□□□□□ -0.39
CDH4-201ENST00000543233 GOLGA6L7A0A1B0GV03 622 aa12.63□□□□□ -0.39
CDH4-201ENST00000543233 MINDY4BA8MYZ0 360 aa12.63□□□□□ -0.39
CDH4-201ENST00000543233 SERPINC1P01008 464 aa12.63□□□□□ -0.39
CDH4-201ENST00000543233 OATP04181 439 aa12.63□□□□□ -0.39
CDH4-201ENST00000543233 FAM163BP0C2L3 166 aa12.63□□□□□ -0.39
CDH4-201ENST00000543233 MYO1EQ12965 1108 aa12.63□□□□□ -0.39
CDH4-201ENST00000543233 STIM1Q13586 685 aa12.63□□□□□ -0.39
CDH4-201ENST00000543233 CCDC13Q8IYE1 715 aa12.63□□□□□ -0.39
CDH4-201ENST00000543233 ATP6V0A4Q9HBG4 840 aa12.63□□□□□ -0.39
CDH4-201ENST00000543233 POLD4Q9HCU8 107 aa12.63□□□□□ -0.39
CDH4-201ENST00000543233 HPS5Q9UPZ3 1129 aa12.63□□□□□ -0.39
CDH4-201ENST00000543233 PARP4Q9UKK3 1724 aaKnown RBP12.63□□□□□ -0.39
CDH4-201ENST00000543233 SLC5A1P13866 664 aa12.62□□□□□ -0.39
CDH4-201ENST00000543233 GGCXP38435 758 aa12.62□□□□□ -0.39
CDH4-201ENST00000543233 METAP2P50579 478 aaKnown RBP eCLIP12.62□□□□□ -0.39
CDH4-201ENST00000543233 FAM98CQ17RN3 349 aaKnown RBP12.62□□□□□ -0.39
CDH4-201ENST00000543233 RCSD1Q6JBY9 416 aa12.62□□□□□ -0.39
CDH4-201ENST00000543233 SYNE3Q6ZMZ3 975 aa12.62□□□□□ -0.39
CDH4-201ENST00000543233 VGLL2Q8N8G2 317 aa12.62□□□□□ -0.39
CDH4-201ENST00000543233 LPIN2Q92539 896 aa12.62□□□□□ -0.39
CDH4-201ENST00000543233 ZNF396Q96N95 335 aaPredicted RBP12.62□□□□□ -0.39
CDH4-201ENST00000543233 NEDD4P46934 1319 aa12.62□□□□□ -0.39
CDH4-201ENST00000543233 KIF28PB7ZC32 967 aa12.62□□□□□ -0.39
CDH4-201ENST00000543233 EIF3HO15372 352 aaKnown RBP eCLIP12.62□□□□□ -0.39
CDH4-201ENST00000543233 NEFHP12036 1026 aa12.62□□□□□ -0.39
CDH4-201ENST00000543233 IGHMBP2P38935 993 aaKnown RBP12.62□□□□□ -0.39
CDH4-201ENST00000543233 GYG1P46976 350 aa12.62□□□□□ -0.39
CDH4-201ENST00000543233 KCNJ6P48051 423 aa12.62□□□□□ -0.39
CDH4-201ENST00000543233 NAA16Q6N069 864 aaPredicted RBP12.62□□□□□ -0.39
CDH4-201ENST00000543233 INTS5Q6P9B9 1019 aaKnown RBP12.62□□□□□ -0.39
CDH4-201ENST00000543233 PTF1AQ7RTS3 328 aa12.62□□□□□ -0.39
CDH4-201ENST00000543233 SPATA21Q7Z572 469 aa12.62□□□□□ -0.39
CDH4-201ENST00000543233 C8orf37Q96NL8 207 aa12.62□□□□□ -0.39
CDH4-201ENST00000543233 PCDHA7Q9UN72 937 aa12.62□□□□□ -0.39
CDH4-201ENST00000543233 SMTNP53814 917 aa12.62□□□□□ -0.39
CDH4-201ENST00000543233 IFT88Q13099 833 aa12.62□□□□□ -0.39
CDH4-201ENST00000543233 PPFIA1Q13136 1202 aa12.62□□□□□ -0.39
CDH4-201ENST00000543233 ACCSLQ4AC99 568 aa12.62□□□□□ -0.39
CDH4-201ENST00000543233 TMEM67Q5HYA8 995 aa12.62□□□□□ -0.39
CDH4-201ENST00000543233 CDCA2Q69YH5 1023 aaPredicted RBP12.62□□□□□ -0.39
CDH4-201ENST00000543233 ZNF34Q8IZ26 560 aa12.62□□□□□ -0.39
CDH4-201ENST00000543233 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.62□□□□□ -0.39
CDH4-201ENST00000543233 SDR42E1Q8WUS8 393 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms