RNA–Protein interactions for RNA: ENST00000542846.5

LRTOMT-220, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 5

Gene LRTOMT, Length 527 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-220ENST00000542846 RUFY2Q8WXA3 655 aa7.42□□□□□ -1.22
LRTOMT-220ENST00000542846 USP6NLQ92738 828 aa7.42□□□□□ -1.22
LRTOMT-220ENST00000542846 ATG4CQ96DT6 458 aa7.42□□□□□ -1.22
LRTOMT-220ENST00000542846 NUDT12Q9BQG2 462 aa7.42□□□□□ -1.22
LRTOMT-220ENST00000542846 TMEM106CQ9BVX2 250 aa7.42□□□□□ -1.22
LRTOMT-220ENST00000542846 NBPF3Q9H094 633 aa7.42□□□□□ -1.22
LRTOMT-220ENST00000542846 SPATC1LQ9H0A9 340 aa7.42□□□□□ -1.22
LRTOMT-220ENST00000542846 IL25Q9H293 177 aa7.42□□□□□ -1.22
LRTOMT-220ENST00000542846 RNF41Q9H4P4 317 aaPredicted RBP7.42□□□□□ -1.22
LRTOMT-220ENST00000542846 INCENPQ9NQS7 918 aa7.42□□□□□ -1.22
LRTOMT-220ENST00000542846 IL17RBQ9NRM6 502 aa7.42□□□□□ -1.22
LRTOMT-220ENST00000542846 FBXO28Q9NVF7 368 aa7.42□□□□□ -1.22
LRTOMT-220ENST00000542846 PPP1R9AQ9ULJ8 1098 aa7.42□□□□□ -1.22
LRTOMT-220ENST00000542846 ADAMTS5Q9UNA0 930 aa7.42□□□□□ -1.22
LRTOMT-220ENST00000542846 KIAA0100Q14667 2235 aaKnown RBP7.42□□□□□ -1.22
LRTOMT-220ENST00000542846 POTEFA5A3E0 1075 aa7.41□□□□□ -1.22
LRTOMT-220ENST00000542846 ZNF213O14771 459 aa7.41□□□□□ -1.22
LRTOMT-220ENST00000542846 RAD21O60216 631 aa7.41□□□□□ -1.22
LRTOMT-220ENST00000542846 INHAP05111 366 aa7.41□□□□□ -1.22
LRTOMT-220ENST00000542846 XRCC5P13010 732 aaKnown RBP7.41□□□□□ -1.22
LRTOMT-220ENST00000542846 ELNP15502 786 aa7.41□□□□□ -1.22
LRTOMT-220ENST00000542846 PTPREP23469 700 aa7.41□□□□□ -1.22
LRTOMT-220ENST00000542846 RGS2P41220 211 aa7.41□□□□□ -1.22
LRTOMT-220ENST00000542846 MTFR1Q15390 333 aa7.41□□□□□ -1.22
LRTOMT-220ENST00000542846 IMMTQ16891 758 aaKnown RBP7.41□□□□□ -1.22
LRTOMT-220ENST00000542846 MORN1Q5T089 497 aa7.41□□□□□ -1.22
LRTOMT-220ENST00000542846 SLFN13Q68D06 897 aa7.41□□□□□ -1.22
LRTOMT-220ENST00000542846 MFSD6Q6ZSS7 791 aa7.41□□□□□ -1.22
LRTOMT-220ENST00000542846 REPS2Q8NFH8 660 aa7.41□□□□□ -1.22
LRTOMT-220ENST00000542846 GMCL1Q96IK5 515 aa7.41□□□□□ -1.22
LRTOMT-220ENST00000542846 NUP88Q99567 741 aaPredicted RBP7.41□□□□□ -1.22
LRTOMT-220ENST00000542846 SLF1Q9BQI6 1058 aa7.41□□□□□ -1.22
LRTOMT-220ENST00000542846 MOV10L1Q9BXT6 1211 aaKnown RBP7.41□□□□□ -1.22
LRTOMT-220ENST00000542846 CWC22Q9HCG8 908 aaKnown RBP7.41□□□□□ -1.22
LRTOMT-220ENST00000542846 TOMM22Q9NS69 142 aa7.41□□□□□ -1.22
LRTOMT-220ENST00000542846 TCP11L1Q9NUJ3 509 aa7.41□□□□□ -1.22
LRTOMT-220ENST00000542846 CTNNA3Q9UI47 895 aa7.41□□□□□ -1.22
LRTOMT-220ENST00000542846 STX8Q9UNK0 236 aa7.41□□□□□ -1.22
LRTOMT-220ENST00000542846 MKI67P46013 3256 aaKnown RBP7.41□□□□□ -1.22
LRTOMT-220ENST00000542846 SLC15A5A6NIM6 579 aa7.4□□□□□ -1.22
LRTOMT-220ENST00000542846 VWA5AO00534 786 aa7.4□□□□□ -1.22
LRTOMT-220ENST00000542846 SGSM2O43147 1006 aa7.4□□□□□ -1.22
LRTOMT-220ENST00000542846 STRNO43815 780 aa7.4□□□□□ -1.22
LRTOMT-220ENST00000542846 NMT2O60551 498 aa7.4□□□□□ -1.22
LRTOMT-220ENST00000542846 SLC25A27O95847 323 aa7.4□□□□□ -1.22
LRTOMT-220ENST00000542846 HMGCRP04035 888 aa7.4□□□□□ -1.22
LRTOMT-220ENST00000542846 NEFLP07196 543 aa7.4□□□□□ -1.22
LRTOMT-220ENST00000542846 HOXC6P09630 235 aa7.4□□□□□ -1.22
LRTOMT-220ENST00000542846 BMP3P12645 472 aa7.4□□□□□ -1.22
LRTOMT-220ENST00000542846 CCL5P13501 91 aa7.4□□□□□ -1.22
LRTOMT-220ENST00000542846 ERCC3P19447 782 aa7.4□□□□□ -1.22
LRTOMT-220ENST00000542846 CYP2B6P20813 491 aa7.4□□□□□ -1.22
LRTOMT-220ENST00000542846 COPB2P35606 906 aa7.4□□□□□ -1.22
LRTOMT-220ENST00000542846 MAP2K5Q13163 448 aa7.4□□□□□ -1.22
LRTOMT-220ENST00000542846 GRB14Q14449 540 aa7.4□□□□□ -1.22
LRTOMT-220ENST00000542846 TMEM132BQ14DG7 1078 aa7.4□□□□□ -1.22
LRTOMT-220ENST00000542846 BMP2KLQ5H9B9 411 aa7.4□□□□□ -1.22
LRTOMT-220ENST00000542846 RRP12Q5JTH9 1297 aaKnown RBP7.4□□□□□ -1.22
LRTOMT-220ENST00000542846 WDR78Q5VTH9 848 aa7.4□□□□□ -1.22
LRTOMT-220ENST00000542846 RIOX2Q8IUF8 465 aa7.4□□□□□ -1.22
LRTOMT-220ENST00000542846 TRMT44Q8IYL2 757 aaKnown RBP7.4□□□□□ -1.22
LRTOMT-220ENST00000542846 PRPF38AQ8NAV1 312 aaKnown RBP7.4□□□□□ -1.22
LRTOMT-220ENST00000542846 TRIB2Q92519 343 aa7.4□□□□□ -1.22
LRTOMT-220ENST00000542846 ESR2Q92731 530 aa7.4□□□□□ -1.22
LRTOMT-220ENST00000542846 CCDC136Q96JN2 1154 aa7.4□□□□□ -1.22
LRTOMT-220ENST00000542846 APBA2Q99767 749 aa7.4□□□□□ -1.22
LRTOMT-220ENST00000542846 MROH8Q9H579 483 aa7.4□□□□□ -1.22
LRTOMT-220ENST00000542846 BIN2Q9UBW5 565 aaPredicted RBP7.4□□□□□ -1.22
LRTOMT-220ENST00000542846 FEM1BQ9UK73 627 aa7.4□□□□□ -1.22
LRTOMT-220ENST00000542846 ZNF214Q9UL59 606 aaPredicted RBP7.4□□□□□ -1.22
LRTOMT-220ENST00000542846 IVNS1ABPQ9Y6Y0 642 aa7.4□□□□□ -1.22
LRTOMT-220ENST00000542846 NEDD4P46934 1319 aa7.4□□□□□ -1.22
LRTOMT-220ENST00000542846 ZNFX1Q9P2E3 1918 aaKnown RBP7.4□□□□□ -1.23
LRTOMT-220ENST00000542846 PLXNA1Q9UIW2 1896 aa7.39□□□□□ -1.23
LRTOMT-220ENST00000542846 ATP2A1O14983 1001 aa7.39□□□□□ -1.23
LRTOMT-220ENST00000542846 PLA2G6O60733 806 aa7.39□□□□□ -1.23
LRTOMT-220ENST00000542846 MYCP01106 439 aaPredicted RBP7.39□□□□□ -1.23
LRTOMT-220ENST00000542846 GJB1P08034 283 aa7.39□□□□□ -1.23
LRTOMT-220ENST00000542846 FDX1P10109 184 aa7.39□□□□□ -1.23
LRTOMT-220ENST00000542846 TOP1P11387 765 aaKnown RBP7.39□□□□□ -1.23
LRTOMT-220ENST00000542846 ZKSCAN1P17029 563 aaPredicted RBP7.39□□□□□ -1.23
LRTOMT-220ENST00000542846 CAPN2P17655 700 aa7.39□□□□□ -1.23
LRTOMT-220ENST00000542846 EN2P19622 333 aaPredicted RBP7.39□□□□□ -1.23
LRTOMT-220ENST00000542846 SLC1A4P43007 532 aa7.39□□□□□ -1.23
LRTOMT-220ENST00000542846 GJA8P48165 433 aa7.39□□□□□ -1.23
LRTOMT-220ENST00000542846 PLS1Q14651 629 aa7.39□□□□□ -1.23
LRTOMT-220ENST00000542846 CCDC178Q5BJE1 867 aa7.39□□□□□ -1.23
LRTOMT-220ENST00000542846 MAP3K21Q5TCX8 1036 aa7.39□□□□□ -1.23
LRTOMT-220ENST00000542846 RCSD1Q6JBY9 416 aa7.39□□□□□ -1.23
LRTOMT-220ENST00000542846 SAMD1Q6SPF0 538 aaPredicted RBP7.39□□□□□ -1.23
LRTOMT-220ENST00000542846 FAM160B2Q86V87 743 aa7.39□□□□□ -1.23
LRTOMT-220ENST00000542846 NCAPG2Q86XI2 1143 aa7.39□□□□□ -1.23
LRTOMT-220ENST00000542846 ABRAQ8N0Z2 381 aa7.39□□□□□ -1.23
LRTOMT-220ENST00000542846 NKX2-3Q8TAU0 364 aa7.39□□□□□ -1.23
LRTOMT-220ENST00000542846 DCAF4Q8WV16 495 aa7.39□□□□□ -1.23
LRTOMT-220ENST00000542846 TTC14Q96N46 770 aa7.39□□□□□ -1.23
LRTOMT-220ENST00000542846 TMEM47Q9BQJ4 181 aa7.39□□□□□ -1.23
LRTOMT-220ENST00000542846 TEX13BQ9BXU2 312 aa7.39□□□□□ -1.23
LRTOMT-220ENST00000542846 KRT23Q9C075 422 aa7.39□□□□□ -1.23
LRTOMT-220ENST00000542846 RNF208Q9H0X6 261 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms