RNA–Protein interactions for RNA: ENST00000542340.1

CACNA2D4-215, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 3

Gene CACNA2D4, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-215ENST00000542340 DOCK3Q8IZD9 2030 aa23.74■■□□□ 1.39
CACNA2D4-215ENST00000542340 CENPFP49454 3210 aa23.74■■□□□ 1.39
CACNA2D4-215ENST00000542340 IMMTQ16891 758 aaKnown RBP23.74■■□□□ 1.39
CACNA2D4-215ENST00000542340 PLEKHH3Q7Z736 793 aa23.74■■□□□ 1.39
CACNA2D4-215ENST00000542340 LRRC47Q8N1G4 583 aaKnown RBP23.74■■□□□ 1.39
CACNA2D4-215ENST00000542340 SOCS4Q8WXH5 440 aa23.74■■□□□ 1.39
CACNA2D4-215ENST00000542340 NUP88Q99567 741 aaPredicted RBP23.74■■□□□ 1.39
CACNA2D4-215ENST00000542340 NUDT12Q9BQG2 462 aa23.74■■□□□ 1.39
CACNA2D4-215ENST00000542340 TCP11L1Q9NUJ3 509 aa23.74■■□□□ 1.39
CACNA2D4-215ENST00000542340 FBXO28Q9NVF7 368 aa23.74■■□□□ 1.39
CACNA2D4-215ENST00000542340 PPP1R9AQ9ULJ8 1098 aa23.74■■□□□ 1.39
CACNA2D4-215ENST00000542340 SGSM2O43147 1006 aa23.73■■□□□ 1.39
CACNA2D4-215ENST00000542340 NMT2O60551 498 aa23.73■■□□□ 1.39
CACNA2D4-215ENST00000542340 SLFN13Q68D06 897 aa23.73■■□□□ 1.39
CACNA2D4-215ENST00000542340 TMEM106CQ9BVX2 250 aa23.73■■□□□ 1.39
CACNA2D4-215ENST00000542340 SPATC1LQ9H0A9 340 aa23.73■■□□□ 1.39
CACNA2D4-215ENST00000542340 MYH4Q9Y623 1939 aa23.72■■□□□ 1.39
CACNA2D4-215ENST00000542340 UBXN2AP68543 259 aa23.72■■□□□ 1.39
CACNA2D4-215ENST00000542340 BMP2KLQ5H9B9 411 aa23.72■■□□□ 1.39
CACNA2D4-215ENST00000542340 MORN1Q5T089 497 aa23.72■■□□□ 1.39
CACNA2D4-215ENST00000542340 SAMD1Q6SPF0 538 aaPredicted RBP23.72■■□□□ 1.39
CACNA2D4-215ENST00000542340 SKAP1Q86WV1 359 aa23.72■■□□□ 1.39
CACNA2D4-215ENST00000542340 SHCBP1Q8NEM2 672 aa23.72■■□□□ 1.39
CACNA2D4-215ENST00000542340 ESR2Q92731 530 aa23.72■■□□□ 1.39
CACNA2D4-215ENST00000542340 SLF1Q9BQI6 1058 aa23.72■■□□□ 1.39
CACNA2D4-215ENST00000542340 MOV10L1Q9BXT6 1211 aaKnown RBP23.72■■□□□ 1.39
CACNA2D4-215ENST00000542340 CWC22Q9HCG8 908 aaKnown RBP23.72■■□□□ 1.39
CACNA2D4-215ENST00000542340 BIN2Q9UBW5 565 aaPredicted RBP23.72■■□□□ 1.39
CACNA2D4-215ENST00000542340 VWA5AO00534 786 aa23.71■■□□□ 1.39
CACNA2D4-215ENST00000542340 XRCC5P13010 732 aaKnown RBP23.71■■□□□ 1.39
CACNA2D4-215ENST00000542340 ELNP15502 786 aa23.71■■□□□ 1.39
CACNA2D4-215ENST00000542340 PRPF38AQ8NAV1 312 aaKnown RBP23.71■■□□□ 1.39
CACNA2D4-215ENST00000542340 USP6NLQ92738 828 aa23.71■■□□□ 1.39
CACNA2D4-215ENST00000542340 GMCL1Q96IK5 515 aa23.71■■□□□ 1.39
CACNA2D4-215ENST00000542340 A0A0G2JMZ2 1700 aa23.7■■□□□ 1.39
CACNA2D4-215ENST00000542340 BMP3P12645 472 aa23.7■■□□□ 1.38
CACNA2D4-215ENST00000542340 TMEM132BQ14DG7 1078 aa23.7■■□□□ 1.38
CACNA2D4-215ENST00000542340 WDR78Q5VTH9 848 aa23.7■■□□□ 1.38
CACNA2D4-215ENST00000542340 TTC14Q96N46 770 aa23.7■■□□□ 1.38
CACNA2D4-215ENST00000542340 FEM1BQ9UK73 627 aa23.7■■□□□ 1.38
CACNA2D4-215ENST00000542340 IVNS1ABPQ9Y6Y0 642 aa23.7■■□□□ 1.38
CACNA2D4-215ENST00000542340 NEDD4P46934 1319 aa23.69■■□□□ 1.38
CACNA2D4-215ENST00000542340 PARP14Q460N5 1801 aa23.69■■□□□ 1.38
CACNA2D4-215ENST00000542340 POTEFA5A3E0 1075 aa23.69■■□□□ 1.38
CACNA2D4-215ENST00000542340 SLC15A5A6NIM6 579 aa23.69■■□□□ 1.38
CACNA2D4-215ENST00000542340 STRNO43815 780 aa23.69■■□□□ 1.38
CACNA2D4-215ENST00000542340 MYCP01106 439 aaPredicted RBP23.69■■□□□ 1.38
CACNA2D4-215ENST00000542340 CYP2B6P20813 491 aa23.69■■□□□ 1.38
CACNA2D4-215ENST00000542340 PTPREP23469 700 aa23.69■■□□□ 1.38
CACNA2D4-215ENST00000542340 RGS2P41220 211 aa23.69■■□□□ 1.38
CACNA2D4-215ENST00000542340 PTH1RQ03431 593 aa23.69■■□□□ 1.38
CACNA2D4-215ENST00000542340 PLS1Q14651 629 aa23.69■■□□□ 1.38
CACNA2D4-215ENST00000542340 ERICH6BQ5W0A0 696 aa23.69■■□□□ 1.38
CACNA2D4-215ENST00000542340 MROH8Q9H579 483 aa23.69■■□□□ 1.38
CACNA2D4-215ENST00000542340 SLC25A27O95847 323 aa23.68■■□□□ 1.38
CACNA2D4-215ENST00000542340 INHAP05111 366 aa23.68■■□□□ 1.38
CACNA2D4-215ENST00000542340 TOP1P11387 765 aaKnown RBP23.68■■□□□ 1.38
CACNA2D4-215ENST00000542340 ERCC3P19447 782 aa23.68■■□□□ 1.38
CACNA2D4-215ENST00000542340 SLC1A4P43007 532 aa23.68■■□□□ 1.38
CACNA2D4-215ENST00000542340 MLLT1Q03111 559 aaPredicted RBP23.68■■□□□ 1.38
CACNA2D4-215ENST00000542340 MTFR1Q15390 333 aa23.68■■□□□ 1.38
CACNA2D4-215ENST00000542340 TRMT44Q8IYL2 757 aaKnown RBP23.68■■□□□ 1.38
CACNA2D4-215ENST00000542340 REPS2Q8NFH8 660 aa23.68■■□□□ 1.38
CACNA2D4-215ENST00000542340 U3KPZ7 1027 aaPredicted RBP23.68■■□□□ 1.38
CACNA2D4-215ENST00000542340 KIAA0100Q14667 2235 aaKnown RBP23.68■■□□□ 1.38
CACNA2D4-215ENST00000542340 LAMA4Q16363 1823 aa23.68■■□□□ 1.38
CACNA2D4-215ENST00000542340 MCCP23508 829 aa23.67■■□□□ 1.38
CACNA2D4-215ENST00000542340 MAP2K5Q13163 448 aa23.67■■□□□ 1.38
CACNA2D4-215ENST00000542340 GRB14Q14449 540 aa23.67■■□□□ 1.38
CACNA2D4-215ENST00000542340 NKX2-3Q8TAU0 364 aa23.67■■□□□ 1.38
CACNA2D4-215ENST00000542340 TMEM47Q9BQJ4 181 aa23.67■■□□□ 1.38
CACNA2D4-215ENST00000542340 KRT23Q9C075 422 aa23.67■■□□□ 1.38
CACNA2D4-215ENST00000542340 CNNM2Q9H8M5 875 aa23.67■■□□□ 1.38
CACNA2D4-215ENST00000542340 ZNF214Q9UL59 606 aaPredicted RBP23.67■■□□□ 1.38
CACNA2D4-215ENST00000542340 PLXNB2O15031 1838 aa23.67■■□□□ 1.38
CACNA2D4-215ENST00000542340 KDM4AO75164 1064 aa23.66■■□□□ 1.38
CACNA2D4-215ENST00000542340 HMGCRP04035 888 aa23.66■■□□□ 1.38
CACNA2D4-215ENST00000542340 CCL5P13501 91 aa23.66■■□□□ 1.38
CACNA2D4-215ENST00000542340 STAT3P40763 770 aa23.66■■□□□ 1.38
CACNA2D4-215ENST00000542340 CCDC178Q5BJE1 867 aa23.66■■□□□ 1.38
CACNA2D4-215ENST00000542340 RCSD1Q6JBY9 416 aa23.66■■□□□ 1.38
CACNA2D4-215ENST00000542340 RIOX2Q8IUF8 465 aa23.66■■□□□ 1.38
CACNA2D4-215ENST00000542340 CHURC1Q8WUH1 139 aa23.66■■□□□ 1.38
CACNA2D4-215ENST00000542340 MAP4K1Q92918 833 aa23.66■■□□□ 1.38
CACNA2D4-215ENST00000542340 APBA2Q99767 749 aa23.66■■□□□ 1.38
CACNA2D4-215ENST00000542340 B4E1Z4 1266 aa23.65■■□□□ 1.38
CACNA2D4-215ENST00000542340 TMEM232C9JQI7 657 aa23.65■■□□□ 1.38
CACNA2D4-215ENST00000542340 PLA2G6O60733 806 aa23.65■■□□□ 1.38
CACNA2D4-215ENST00000542340 ZBED4O75132 1171 aa23.65■■□□□ 1.38
CACNA2D4-215ENST00000542340 FDX1P10109 184 aa23.65■■□□□ 1.38
CACNA2D4-215ENST00000542340 COPB2P35606 906 aa23.65■■□□□ 1.38
CACNA2D4-215ENST00000542340 FAM160B2Q86V87 743 aa23.65■■□□□ 1.38
CACNA2D4-215ENST00000542340 IQCA1Q86XH1 822 aa23.65■■□□□ 1.38
CACNA2D4-215ENST00000542340 NCAPG2Q86XI2 1143 aa23.65■■□□□ 1.38
CACNA2D4-215ENST00000542340 DGKHQ86XP1 1220 aa23.65■■□□□ 1.38
CACNA2D4-215ENST00000542340 ABRAQ8N0Z2 381 aa23.65■■□□□ 1.38
CACNA2D4-215ENST00000542340 DCAF4Q8WV16 495 aa23.65■■□□□ 1.38
CACNA2D4-215ENST00000542340 TRIB2Q92519 343 aa23.65■■□□□ 1.38
CACNA2D4-215ENST00000542340 KIFC2Q96AC6 838 aa23.65■■□□□ 1.38
CACNA2D4-215ENST00000542340 RNF208Q9H0X6 261 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms