RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 ICA1Q05084 483 aa10.02□□□□□ -0.81
THBS3-210ENST00000541576 SLC35G1Q2M3R5 365 aa10.02□□□□□ -0.81
THBS3-210ENST00000541576 BRAPQ7Z569 592 aa10.02□□□□□ -0.81
THBS3-210ENST00000541576 ZSCAN30Q86W11 494 aa10.02□□□□□ -0.81
THBS3-210ENST00000541576 NYAP2Q9P242 653 aa10.02□□□□□ -0.81
THBS3-210ENST00000541576 DDNO94850 711 aaPredicted RBP10.01□□□□□ -0.81
THBS3-210ENST00000541576 EEF2P13639 858 aaKnown RBP10.01□□□□□ -0.81
THBS3-210ENST00000541576 VEGFAP15692 232 aaPredicted RBP10.01□□□□□ -0.81
THBS3-210ENST00000541576 GNL2Q13823 731 aaKnown RBP10.01□□□□□ -0.81
THBS3-210ENST00000541576 RRP1BQ14684 758 aaKnown RBP10.01□□□□□ -0.81
THBS3-210ENST00000541576 SAFBQ15424 915 aaKnown RBP eCLIP10.01□□□□□ -0.81
THBS3-210ENST00000541576 MIGA2Q7L4E1 593 aa10.01□□□□□ -0.81
THBS3-210ENST00000541576 TRPM4Q8TD43 1214 aa10.01□□□□□ -0.81
THBS3-210ENST00000541576 SCAND2PQ9GZW5 306 aaPredicted RBP10.01□□□□□ -0.81
THBS3-210ENST00000541576 KCNJ14Q9UNX9 436 aa10.01□□□□□ -0.81
THBS3-210ENST00000541576 MYH4Q9Y623 1939 aa10.01□□□□□ -0.81
THBS3-210ENST00000541576 MMP1P03956 469 aa10.01□□□□□ -0.81
THBS3-210ENST00000541576 EPS15P42566 896 aa10.01□□□□□ -0.81
THBS3-210ENST00000541576 CEBPZQ03701 1054 aaKnown RBP10.01□□□□□ -0.81
THBS3-210ENST00000541576 GPR162Q16538 588 aa10.01□□□□□ -0.81
THBS3-210ENST00000541576 LEO1Q8WVC0 666 aaPredicted RBP10.01□□□□□ -0.81
THBS3-210ENST00000541576 PIBF1Q8WXW3 757 aa10.01□□□□□ -0.81
THBS3-210ENST00000541576 CFAP45Q9UL16 551 aa10.01□□□□□ -0.81
THBS3-210ENST00000541576 SNHG28P0DPA3 235 aa10.01□□□□□ -0.81
THBS3-210ENST00000541576 SCG2P13521 617 aa10.01□□□□□ -0.81
THBS3-210ENST00000541576 ASPRV1Q53RT3 343 aa10.01□□□□□ -0.81
THBS3-210ENST00000541576 MKL1Q969V6 931 aa10.01□□□□□ -0.81
THBS3-210ENST00000541576 TEPSINQ96N21 525 aa10.01□□□□□ -0.81
THBS3-210ENST00000541576 ZNF396Q96N95 335 aaPredicted RBP10.01□□□□□ -0.81
THBS3-210ENST00000541576 USP28Q96RU2 1077 aa10.01□□□□□ -0.81
THBS3-210ENST00000541576 DEFB129Q9H1M3 183 aa10.01□□□□□ -0.81
THBS3-210ENST00000541576 VPS54Q9P1Q0 977 aa10.01□□□□□ -0.81
THBS3-210ENST00000541576 LMOD1P29536 600 aaPredicted RBP10□□□□□ -0.81
THBS3-210ENST00000541576 JAG1P78504 1218 aa10□□□□□ -0.81
THBS3-210ENST00000541576 PFKFB3Q16875 520 aaPredicted RBP10□□□□□ -0.81
THBS3-210ENST00000541576 ANGEL2Q5VTE6 544 aaKnown RBP10□□□□□ -0.81
THBS3-210ENST00000541576 ATL3Q6DD88 541 aa10□□□□□ -0.81
THBS3-210ENST00000541576 SPZ1Q9BXG8 430 aa10□□□□□ -0.81
THBS3-210ENST00000541576 CYTH3O43739 400 aa10□□□□□ -0.81
THBS3-210ENST00000541576 U2AF2P26368 475 aaKnown RBP eCLIP10□□□□□ -0.81
THBS3-210ENST00000541576 SMARCA1P28370 1054 aa10□□□□□ -0.81
THBS3-210ENST00000541576 MAP3K10Q02779 954 aa10□□□□□ -0.81
THBS3-210ENST00000541576 SIAH1Q8IUQ4 282 aa10□□□□□ -0.81
THBS3-210ENST00000541576 APOBEC3FQ8IUX4 373 aaKnown RBP10□□□□□ -0.81
THBS3-210ENST00000541576 DIS3L2Q8IYB7 885 aaKnown RBP10□□□□□ -0.81
THBS3-210ENST00000541576 SPATA32Q96LK8 384 aa10□□□□□ -0.81
THBS3-210ENST00000541576 CPVLQ9H3G5 476 aa10□□□□□ -0.81
THBS3-210ENST00000541576 FRMPD2Q68DX3 1309 aaPredicted RBP10□□□□□ -0.81
THBS3-210ENST00000541576 MYH15Q9Y2K3 1946 aa9.99□□□□□ -0.81
THBS3-210ENST00000541576 BTBD18B2RXH4 712 aa9.99□□□□□ -0.81
THBS3-210ENST00000541576 RAD21O60216 631 aa9.99□□□□□ -0.81
THBS3-210ENST00000541576 UBE2HP62256 183 aa9.99□□□□□ -0.81
THBS3-210ENST00000541576 ZNF543Q08ER8 600 aa9.99□□□□□ -0.81
THBS3-210ENST00000541576 MYSM1Q5VVJ2 828 aa9.99□□□□□ -0.81
THBS3-210ENST00000541576 TMEM63CQ9P1W3 806 aa9.99□□□□□ -0.81
THBS3-210ENST00000541576 ZBTB21Q9ULJ3 1066 aa9.99□□□□□ -0.81
THBS3-210ENST00000541576 MBD3O95983 291 aa9.99□□□□□ -0.81
THBS3-210ENST00000541576 CAP2P40123 477 aa9.99□□□□□ -0.81
THBS3-210ENST00000541576 CBX1P83916 185 aa9.99□□□□□ -0.81
THBS3-210ENST00000541576 GPATCH4Q5T3I0 446 aaKnown RBP9.99□□□□□ -0.81
THBS3-210ENST00000541576 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.99□□□□□ -0.81
THBS3-210ENST00000541576 FOXP1Q9H334 677 aaPredicted RBP9.99□□□□□ -0.81
THBS3-210ENST00000541576 GGA3Q9NZ52 723 aa9.99□□□□□ -0.81
THBS3-210ENST00000541576 RCOR1Q9UKL0 485 aa9.99□□□□□ -0.81
THBS3-210ENST00000541576 ELP1O95163 1332 aa9.99□□□□□ -0.81
THBS3-210ENST00000541576 HIRAP54198 1017 aaPredicted RBP9.99□□□□□ -0.81
THBS3-210ENST00000541576 CCDC96Q2M329 555 aa9.99□□□□□ -0.81
THBS3-210ENST00000541576 OXER1Q8TDS5 423 aa9.99□□□□□ -0.81
THBS3-210ENST00000541576 PGBD1Q96JS3 809 aa9.99□□□□□ -0.81
THBS3-210ENST00000541576 PHF20Q9BVI0 1012 aa9.99□□□□□ -0.81
THBS3-210ENST00000541576 UBA5Q9GZZ9 404 aa9.99□□□□□ -0.81
THBS3-210ENST00000541576 GPCPD1Q9NPB8 672 aa9.99□□□□□ -0.81
THBS3-210ENST00000541576 GRIN3BO60391 1043 aa9.98□□□□□ -0.81
THBS3-210ENST00000541576 CCDC173Q0VFZ6 552 aa9.98□□□□□ -0.81
THBS3-210ENST00000541576 SLFN13Q68D06 897 aa9.98□□□□□ -0.81
THBS3-210ENST00000541576 DPY19L2Q6NUT2 758 aa9.98□□□□□ -0.81
THBS3-210ENST00000541576 NOSTRINQ8IVI9 506 aa9.98□□□□□ -0.81
THBS3-210ENST00000541576 DCAF4Q8WV16 495 aa9.98□□□□□ -0.81
THBS3-210ENST00000541576 RRP36Q96EU6 259 aaKnown RBP9.98□□□□□ -0.81
THBS3-210ENST00000541576 ARHGEF10LQ9HCE6 1279 aa9.98□□□□□ -0.81
THBS3-210ENST00000541576 VAT1LQ9HCJ6 419 aa9.98□□□□□ -0.81
THBS3-210ENST00000541576 BRMS1Q9HCU9 246 aa9.98□□□□□ -0.81
THBS3-210ENST00000541576 ADARB2Q9NS39 739 aaKnown RBP9.98□□□□□ -0.81
THBS3-210ENST00000541576 ISY1Q9ULR0 285 aaKnown RBP9.98□□□□□ -0.81
THBS3-210ENST00000541576 CLIC4Q9Y696 253 aa9.98□□□□□ -0.81
THBS3-210ENST00000541576 SLC1A4P43007 532 aa9.98□□□□□ -0.81
THBS3-210ENST00000541576 NR5A1Q13285 461 aa9.98□□□□□ -0.81
THBS3-210ENST00000541576 HOMER1Q86YM7 354 aa9.98□□□□□ -0.81
THBS3-210ENST00000541576 GMCL1P1Q8NEA9 526 aa9.98□□□□□ -0.81
THBS3-210ENST00000541576 GPKOWQ92917 476 aaPredicted RBP eCLIP9.98□□□□□ -0.81
THBS3-210ENST00000541576 ZNF830Q96NB3 372 aaPredicted RBP9.98□□□□□ -0.81
THBS3-210ENST00000541576 RIOX1Q9H6W3 641 aa9.98□□□□□ -0.81
THBS3-210ENST00000541576 SH3GLB2Q9NR46 395 aa9.98□□□□□ -0.81
THBS3-210ENST00000541576 SEC63Q9UGP8 760 aaKnown RBP9.98□□□□□ -0.81
THBS3-210ENST00000541576 SYNPO2Q9UMS6 1093 aa9.98□□□□□ -0.81
THBS3-210ENST00000541576 F5H6K3 240 aa9.97□□□□□ -0.81
THBS3-210ENST00000541576 ASNSP08243 561 aa9.97□□□□□ -0.81
THBS3-210ENST00000541576 KRT2P35908 639 aa9.97□□□□□ -0.81
THBS3-210ENST00000541576 NLRP5P59047 1200 aa9.97□□□□□ -0.81
THBS3-210ENST00000541576 KLRC3Q07444 240 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms