RNA–Protein interactions for RNA: ENST00000541537.5

DDX47-206, Transcript of DEAD-box helicase 47, humanhuman

TSL 1 (best)

Gene DDX47, Length 1,517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47-206ENST00000541537 LARP6Q9BRS8 491 aaKnown RBP12.13□□□□□ -0.47
DDX47-206ENST00000541537 MYL10Q9BUA6 226 aa12.13□□□□□ -0.47
DDX47-206ENST00000541537 TMOD4Q9NZQ9 345 aa12.13□□□□□ -0.47
DDX47-206ENST00000541537 MTMR7Q9Y216 660 aa12.13□□□□□ -0.47
DDX47-206ENST00000541537 GOLGA8BA8MQT2 603 aa12.12□□□□□ -0.47
DDX47-206ENST00000541537 CETPP11597 493 aa12.12□□□□□ -0.47
DDX47-206ENST00000541537 MNX1P50219 401 aaPredicted RBP12.12□□□□□ -0.47
DDX47-206ENST00000541537 MOGSQ13724 837 aa12.12□□□□□ -0.47
DDX47-206ENST00000541537 NOL8Q76FK4 1167 aaKnown RBP12.12□□□□□ -0.47
DDX47-206ENST00000541537 MICU3Q86XE3 530 aa12.12□□□□□ -0.47
DDX47-206ENST00000541537 RAB11FIP4Q86YS3 637 aa12.12□□□□□ -0.47
DDX47-206ENST00000541537 PROCA1Q8NCQ7 364 aaPredicted RBP12.12□□□□□ -0.47
DDX47-206ENST00000541537 DCAF4Q8WV16 495 aa12.12□□□□□ -0.47
DDX47-206ENST00000541537 CHMP4CQ96CF2 233 aa12.12□□□□□ -0.47
DDX47-206ENST00000541537 TPCN1Q9ULQ1 816 aa12.12□□□□□ -0.47
DDX47-206ENST00000541537 BAZ2BQ9UIF8 2168 aaKnown RBP12.12□□□□□ -0.47
DDX47-206ENST00000541537 PARP14Q460N5 1801 aa12.12□□□□□ -0.47
DDX47-206ENST00000541537 NID2Q14112 1375 aa12.12□□□□□ -0.47
DDX47-206ENST00000541537 CCL15-CCL14A0A0B4J2E2 113 aa12.11□□□□□ -0.47
DDX47-206ENST00000541537 WDR46O15213 610 aaKnown RBP12.11□□□□□ -0.47
DDX47-206ENST00000541537 ZBTB43O43298 467 aa12.11□□□□□ -0.47
DDX47-206ENST00000541537 CALM1P0DP23 149 aa12.11□□□□□ -0.47
DDX47-206ENST00000541537 CALM2P0DP24 149 aa12.11□□□□□ -0.47
DDX47-206ENST00000541537 CALM3P0DP25 149 aa12.11□□□□□ -0.47
DDX47-206ENST00000541537 RXRAP19793 462 aa12.11□□□□□ -0.47
DDX47-206ENST00000541537 SLC1A4P43007 532 aa12.11□□□□□ -0.47
DDX47-206ENST00000541537 RCAN1P53805 252 aa12.11□□□□□ -0.47
DDX47-206ENST00000541537 NOGQ13253 232 aa12.11□□□□□ -0.47
DDX47-206ENST00000541537 GRM1Q13255 1194 aa12.11□□□□□ -0.47
DDX47-206ENST00000541537 CCL15Q16663 113 aa12.11□□□□□ -0.47
DDX47-206ENST00000541537 SYNE3Q6ZMZ3 975 aa12.11□□□□□ -0.47
DDX47-206ENST00000541537 GADL1Q6ZQY3 521 aa12.11□□□□□ -0.47
DDX47-206ENST00000541537 FASTKD5Q7L8L6 764 aaKnown RBP12.11□□□□□ -0.47
DDX47-206ENST00000541537 NUP133Q8WUM0 1156 aa12.11□□□□□ -0.47
DDX47-206ENST00000541537 BRI3BPQ8WY22 251 aa12.11□□□□□ -0.47
DDX47-206ENST00000541537 NUP88Q99567 741 aaPredicted RBP12.11□□□□□ -0.47
DDX47-206ENST00000541537 NAP1L2Q9ULW6 460 aaPredicted RBP12.11□□□□□ -0.47
DDX47-206ENST00000541537 HPS5Q9UPZ3 1129 aa12.11□□□□□ -0.47
DDX47-206ENST00000541537 RLFQ13129 1914 aa12.11□□□□□ -0.47
DDX47-206ENST00000541537 THSD7BQ9C0I4 1608 aa12.11□□□□□ -0.47
DDX47-206ENST00000541537 TESPA1A2RU30 521 aaPredicted RBP12.11□□□□□ -0.47
DDX47-206ENST00000541537 MANSC4A6NHS7 340 aaPredicted RBP12.11□□□□□ -0.47
DDX47-206ENST00000541537 BMP3P12645 472 aa12.11□□□□□ -0.47
DDX47-206ENST00000541537 PDIA3P30101 505 aaKnown RBP12.11□□□□□ -0.47
DDX47-206ENST00000541537 ZNF543Q08ER8 600 aa12.11□□□□□ -0.47
DDX47-206ENST00000541537 GRM4Q14833 912 aa12.11□□□□□ -0.47
DDX47-206ENST00000541537 CCDC96Q2M329 555 aa12.11□□□□□ -0.47
DDX47-206ENST00000541537 FAM83BQ5T0W9 1011 aa12.11□□□□□ -0.47
DDX47-206ENST00000541537 TREML2Q5T2D2 321 aa12.11□□□□□ -0.47
DDX47-206ENST00000541537 CCDC144CPQ8IYA2 1237 aa12.11□□□□□ -0.47
DDX47-206ENST00000541537 FANCBQ8NB91 859 aa12.11□□□□□ -0.47
DDX47-206ENST00000541537 ZNF274Q96GC6 653 aaPredicted RBP12.11□□□□□ -0.47
DDX47-206ENST00000541537 ZIC5Q96T25 663 aa12.11□□□□□ -0.47
DDX47-206ENST00000541537 MAP3K14Q99558 947 aa12.11□□□□□ -0.47
DDX47-206ENST00000541537 RPAP3Q9H6T3 665 aaPredicted RBP12.11□□□□□ -0.47
DDX47-206ENST00000541537 LIMCH1Q9UPQ0 1083 aa12.11□□□□□ -0.47
DDX47-206ENST00000541537 AGTPBP1Q9UPW5 1226 aa12.11□□□□□ -0.47
DDX47-206ENST00000541537 FRMPD2Q68DX3 1309 aaPredicted RBP12.1□□□□□ -0.47
DDX47-206ENST00000541537 WDR33Q9C0J8 1336 aaKnown RBP12.1□□□□□ -0.47
DDX47-206ENST00000541537 GOLGA8AA7E2F4 631 aa12.1□□□□□ -0.47
DDX47-206ENST00000541537 LARGE1O95461 756 aa12.1□□□□□ -0.47
DDX47-206ENST00000541537 PARP1P09874 1014 aaKnown RBP12.1□□□□□ -0.47
DDX47-206ENST00000541537 GOLGA8HP0CJ92 632 aa12.1□□□□□ -0.47
DDX47-206ENST00000541537 MCM2P49736 904 aa12.1□□□□□ -0.47
DDX47-206ENST00000541537 METAP2P50579 478 aaKnown RBP eCLIP12.1□□□□□ -0.47
DDX47-206ENST00000541537 ASPRV1Q53RT3 343 aa12.1□□□□□ -0.47
DDX47-206ENST00000541537 GPATCH4Q5T3I0 446 aaKnown RBP12.1□□□□□ -0.47
DDX47-206ENST00000541537 GPAT2Q6NUI2 795 aa12.1□□□□□ -0.47
DDX47-206ENST00000541537 KCTD1Q719H9 257 aa12.1□□□□□ -0.47
DDX47-206ENST00000541537 CTCFLQ8NI51 663 aaPredicted RBP12.1□□□□□ -0.47
DDX47-206ENST00000541537 TANGO6Q9C0B7 1094 aa12.1□□□□□ -0.47
DDX47-206ENST00000541537 MAD2L2Q9UI95 211 aa12.1□□□□□ -0.47
DDX47-206ENST00000541537 ISY1Q9ULR0 285 aaKnown RBP12.1□□□□□ -0.47
DDX47-206ENST00000541537 FARP1Q9Y4F1 1045 aaPredicted RBP12.1□□□□□ -0.47
DDX47-206ENST00000541537 PALM3A6NDB9 673 aaPredicted RBP12.09□□□□□ -0.47
DDX47-206ENST00000541537 BTBD19C9JJ37 291 aa12.09□□□□□ -0.47
DDX47-206ENST00000541537 AOC2O75106 756 aa12.09□□□□□ -0.47
DDX47-206ENST00000541537 KIF5BP33176 963 aa12.09□□□□□ -0.47
DDX47-206ENST00000541537 VEGFBP49765 207 aa12.09□□□□□ -0.47
DDX47-206ENST00000541537 SREBF2Q12772 1141 aa12.09□□□□□ -0.47
DDX47-206ENST00000541537 STK3Q13188 491 aa12.09□□□□□ -0.47
DDX47-206ENST00000541537 ME3Q16798 604 aa12.09□□□□□ -0.47
DDX47-206ENST00000541537 RTN1Q16799 776 aa12.09□□□□□ -0.47
DDX47-206ENST00000541537 STAG2Q8N3U4 1231 aa12.09□□□□□ -0.47
DDX47-206ENST00000541537 PTPN18Q99952 460 aa12.09□□□□□ -0.47
DDX47-206ENST00000541537 FAM217BQ9NTX9 383 aaPredicted RBP12.09□□□□□ -0.47
DDX47-206ENST00000541537 USP17L15C9J2P7 530 aa12.08□□□□□ -0.48
DDX47-206ENST00000541537 USP17L13C9JLJ4 530 aa12.08□□□□□ -0.48
DDX47-206ENST00000541537 TMEM232C9JQI7 657 aa12.08□□□□□ -0.48
DDX47-206ENST00000541537 USP17L11C9JVI0 530 aa12.08□□□□□ -0.48
DDX47-206ENST00000541537 USP17L18D6R9N7 530 aa12.08□□□□□ -0.48
DDX47-206ENST00000541537 USP17L22D6RA61 530 aa12.08□□□□□ -0.48
DDX47-206ENST00000541537 USP17L17D6RBQ6 530 aa12.08□□□□□ -0.48
DDX47-206ENST00000541537 USP17L19D6RCP7 530 aa12.08□□□□□ -0.48
DDX47-206ENST00000541537 USP17L20D6RJB6 530 aa12.08□□□□□ -0.48
DDX47-206ENST00000541537 IGF2BP3O00425 579 aaKnown RBP eCLIP12.08□□□□□ -0.48
DDX47-206ENST00000541537 PFKFB2O60825 505 aa12.08□□□□□ -0.48
DDX47-206ENST00000541537 CDC27P30260 824 aa12.08□□□□□ -0.48
DDX47-206ENST00000541537 HOXA7P31268 230 aaPredicted RBP12.08□□□□□ -0.48
DDX47-206ENST00000541537 STAT2P52630 851 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms