RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 KAT6BQ8WYB5 2073 aa6.68□□□□□ -1.34
DDB1-219ENST00000541513 CEP170BQ9Y4F5 1589 aaPredicted RBP6.68□□□□□ -1.34
DDB1-219ENST00000541513 UHRF1BP1Q6BDS2 1440 aa6.67□□□□□ -1.34
DDB1-219ENST00000541513 A2ML1A8K2U0 1454 aa6.67□□□□□ -1.34
DDB1-219ENST00000541513 ABHD14A-ACY1A0A1B0GW23 586 aa6.67□□□□□ -1.34
DDB1-219ENST00000541513 K7ESF4 209 aa6.67□□□□□ -1.34
DDB1-219ENST00000541513 EREGO14944 169 aa6.67□□□□□ -1.34
DDB1-219ENST00000541513 SDSP20132 328 aa6.67□□□□□ -1.34
DDB1-219ENST00000541513 RRM1P23921 792 aa6.67□□□□□ -1.34
DDB1-219ENST00000541513 MCM4P33991 863 aa6.67□□□□□ -1.34
DDB1-219ENST00000541513 STK3Q13188 491 aa6.67□□□□□ -1.34
DDB1-219ENST00000541513 NCAPHQ15003 741 aa6.67□□□□□ -1.34
DDB1-219ENST00000541513 TLR1Q15399 786 aa6.67□□□□□ -1.34
DDB1-219ENST00000541513 TRIP4Q15650 581 aaPredicted RBP6.67□□□□□ -1.34
DDB1-219ENST00000541513 LINC01559Q495D7 138 aa6.67□□□□□ -1.34
DDB1-219ENST00000541513 TBC1D10BQ4KMP7 808 aaPredicted RBP6.67□□□□□ -1.34
DDB1-219ENST00000541513 TTBK2Q6IQ55 1244 aa6.67□□□□□ -1.34
DDB1-219ENST00000541513 CNNM4Q6P4Q7 775 aa6.67□□□□□ -1.34
DDB1-219ENST00000541513 REC114Q7Z4M0 266 aa6.67□□□□□ -1.34
DDB1-219ENST00000541513 CREBRFQ8IUR6 639 aa6.67□□□□□ -1.34
DDB1-219ENST00000541513 TTC30BQ8N4P2 665 aa6.67□□□□□ -1.34
DDB1-219ENST00000541513 IPO4Q8TEX9 1081 aaKnown RBP6.67□□□□□ -1.34
DDB1-219ENST00000541513 LEO1Q8WVC0 666 aaPredicted RBP6.67□□□□□ -1.34
DDB1-219ENST00000541513 PMEPA1Q969W9 287 aa6.67□□□□□ -1.34
DDB1-219ENST00000541513 DHRS4Q9BTZ2 278 aa6.67□□□□□ -1.34
DDB1-219ENST00000541513 MENTQ9BUN1 341 aa6.67□□□□□ -1.34
DDB1-219ENST00000541513 SLC13A1Q9BZW2 595 aa6.67□□□□□ -1.34
DDB1-219ENST00000541513 EHD4Q9H223 541 aa6.67□□□□□ -1.34
DDB1-219ENST00000541513 RETREG1Q9H6L5 497 aa6.67□□□□□ -1.34
DDB1-219ENST00000541513 EHMT1Q9H9B1 1298 aa6.67□□□□□ -1.34
DDB1-219ENST00000541513 PLA2R1Q13018 1463 aa6.66□□□□□ -1.34
DDB1-219ENST00000541513 CLTCL1P53675 1640 aa6.66□□□□□ -1.34
DDB1-219ENST00000541513 A0A1W2PP55 124 aa6.66□□□□□ -1.34
DDB1-219ENST00000541513 A0A1W2PRQ8 180 aa6.66□□□□□ -1.34
DDB1-219ENST00000541513 TLR3O15455 904 aaKnown RBP6.66□□□□□ -1.34
DDB1-219ENST00000541513 FIBPO43427 364 aa6.66□□□□□ -1.34
DDB1-219ENST00000541513 IL2RAP01589 272 aa6.66□□□□□ -1.34
DDB1-219ENST00000541513 RPN1P04843 607 aaKnown RBP6.66□□□□□ -1.34
DDB1-219ENST00000541513 RENBPP51606 427 aa6.66□□□□□ -1.34
DDB1-219ENST00000541513 TERF1P54274 439 aa6.66□□□□□ -1.34
DDB1-219ENST00000541513 TBX2Q13207 712 aaPredicted RBP6.66□□□□□ -1.34
DDB1-219ENST00000541513 GTF2H3Q13889 308 aa6.66□□□□□ -1.34
DDB1-219ENST00000541513 GALEQ14376 348 aa6.66□□□□□ -1.34
DDB1-219ENST00000541513 ELF2Q15723 593 aa6.66□□□□□ -1.34
DDB1-219ENST00000541513 TMEM240Q5SV17 173 aa6.66□□□□□ -1.34
DDB1-219ENST00000541513 FOXB2Q5VYV0 432 aa6.66□□□□□ -1.34
DDB1-219ENST00000541513 NBPF10Q6P3W6 841 aaKnown RBP6.66□□□□□ -1.34
DDB1-219ENST00000541513 CFAP161Q6P656 301 aa6.66□□□□□ -1.34
DDB1-219ENST00000541513 RASSF3Q86WH2 238 aa6.66□□□□□ -1.34
DDB1-219ENST00000541513 TPH2Q8IWU9 490 aa6.66□□□□□ -1.34
DDB1-219ENST00000541513 CLASRPQ8N2M8 674 aaKnown RBP6.66□□□□□ -1.34
DDB1-219ENST00000541513 CCDC24Q8N4L8 307 aa6.66□□□□□ -1.34
DDB1-219ENST00000541513 VPS37AQ8NEZ2 397 aa6.66□□□□□ -1.34
DDB1-219ENST00000541513 SLC7A3Q8WY07 619 aa6.66□□□□□ -1.34
DDB1-219ENST00000541513 ALDH8A1Q9H2A2 487 aaPredicted RBP6.66□□□□□ -1.34
DDB1-219ENST00000541513 MAN1C1Q9NR34 630 aa6.66□□□□□ -1.34
DDB1-219ENST00000541513 DZANK1Q9NVP4 752 aa6.66□□□□□ -1.34
DDB1-219ENST00000541513 SAGE1Q9NXZ1 904 aa6.66□□□□□ -1.34
DDB1-219ENST00000541513 IP6K2Q9UHH9 426 aa6.66□□□□□ -1.34
DDB1-219ENST00000541513 RCAN3Q9UKA8 241 aa6.66□□□□□ -1.34
DDB1-219ENST00000541513 HDAC9Q9UKV0 1011 aa6.66□□□□□ -1.34
DDB1-219ENST00000541513 SLC45A1Q9Y2W3 748 aa6.66□□□□□ -1.34
DDB1-219ENST00000541513 CTDP1Q9Y5B0 961 aaPredicted RBP6.66□□□□□ -1.34
DDB1-219ENST00000541513 LMTK3Q96Q04 1460 aa6.66□□□□□ -1.34
DDB1-219ENST00000541513 ADGRB3O60242 1522 aa6.66□□□□□ -1.34
DDB1-219ENST00000541513 NEURL4Q96JN8 1562 aa6.65□□□□□ -1.34
DDB1-219ENST00000541513 TMEM131LA2VDJ0 1609 aa6.65□□□□□ -1.34
DDB1-219ENST00000541513 CBFA2T2O43439 604 aa6.65□□□□□ -1.34
DDB1-219ENST00000541513 ORC4O43929 436 aa6.65□□□□□ -1.34
DDB1-219ENST00000541513 LILRA1O75019 489 aa6.65□□□□□ -1.34
DDB1-219ENST00000541513 CILPO75339 1184 aa6.65□□□□□ -1.34
DDB1-219ENST00000541513 FBXO24O75426 580 aa6.65□□□□□ -1.34
DDB1-219ENST00000541513 RHOBTB3O94955 611 aa6.65□□□□□ -1.34
DDB1-219ENST00000541513 CT47B1P0C2W7 299 aaPredicted RBP6.65□□□□□ -1.34
DDB1-219ENST00000541513 RXRGP48443 463 aa6.65□□□□□ -1.34
DDB1-219ENST00000541513 GTF2A2P52657 109 aa6.65□□□□□ -1.34
DDB1-219ENST00000541513 CLCQ05315 142 aa6.65□□□□□ -1.34
DDB1-219ENST00000541513 DHX9Q08211 1270 aaKnown RBP6.65□□□□□ -1.34
DDB1-219ENST00000541513 GRM3Q14832 879 aa6.65□□□□□ -1.34
DDB1-219ENST00000541513 MZT2BQ6NZ67 158 aa6.65□□□□□ -1.34
DDB1-219ENST00000541513 IGF2-ASQ6U949 168 aa6.65□□□□□ -1.34
DDB1-219ENST00000541513 BNC2Q6ZN30 1099 aaPredicted RBP6.65□□□□□ -1.34
DDB1-219ENST00000541513 TTC6Q86TZ1 520 aa6.65□□□□□ -1.34
DDB1-219ENST00000541513 FCHSD1Q86WN1 690 aa6.65□□□□□ -1.34
DDB1-219ENST00000541513 TAB3Q8N5C8 712 aaPredicted RBP6.65□□□□□ -1.34
DDB1-219ENST00000541513 SECISBP2LQ93073 1101 aaKnown RBP6.65□□□□□ -1.34
DDB1-219ENST00000541513 TM9SF2Q99805 663 aa6.65□□□□□ -1.34
DDB1-219ENST00000541513 CNNM2Q9H8M5 875 aa6.65□□□□□ -1.34
DDB1-219ENST00000541513 BRMS1Q9HCU9 246 aa6.65□□□□□ -1.34
DDB1-219ENST00000541513 RASSF1Q9NS23 344 aa6.65□□□□□ -1.34
DDB1-219ENST00000541513 ANKRD6Q9Y2G4 727 aa6.65□□□□□ -1.34
DDB1-219ENST00000541513 SLC12A7Q9Y666 1083 aa6.65□□□□□ -1.34
DDB1-219ENST00000541513 KCNMB2Q9Y691 235 aa6.65□□□□□ -1.34
DDB1-219ENST00000541513 PARP3Q9Y6F1 533 aa6.65□□□□□ -1.34
DDB1-219ENST00000541513 UGGT1Q9NYU2 1555 aa6.65□□□□□ -1.35
DDB1-219ENST00000541513 POLR1AO95602 1720 aaPredicted RBP6.64□□□□□ -1.35
DDB1-219ENST00000541513 MEIS3P2A8K0S8 358 aa6.64□□□□□ -1.35
DDB1-219ENST00000541513 UBAP1LF5GYI3 381 aa6.64□□□□□ -1.35
DDB1-219ENST00000541513 PMM2O15305 246 aa6.64□□□□□ -1.35
DDB1-219ENST00000541513 SUSD5O60279 629 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms