RNA–Protein interactions for RNA: ENST00000541416.5

SNHG1-216, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 996 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-216ENST00000541416 DNAJC2Q99543 621 aaKnown RBP14.78□□□□□ -0.04
SNHG1-216ENST00000541416 GOPCQ9HD26 462 aa14.78□□□□□ -0.04
SNHG1-216ENST00000541416 PHF24Q9UPV7 400 aa14.78□□□□□ -0.04
SNHG1-216ENST00000541416 CNPY2Q9Y2B0 182 aa14.78□□□□□ -0.04
SNHG1-216ENST00000541416 HMMRO75330 724 aa14.77□□□□□ -0.05
SNHG1-216ENST00000541416 MS4A1P11836 297 aa14.77□□□□□ -0.05
SNHG1-216ENST00000541416 AKR1A1P14550 325 aa14.77□□□□□ -0.05
SNHG1-216ENST00000541416 FOSL2P15408 326 aa14.77□□□□□ -0.05
SNHG1-216ENST00000541416 RIOX2Q8IUF8 465 aa14.77□□□□□ -0.05
SNHG1-216ENST00000541416 RHPN1Q8TCX5 695 aa14.77□□□□□ -0.05
SNHG1-216ENST00000541416 NUP133Q8WUM0 1156 aa14.77□□□□□ -0.05
SNHG1-216ENST00000541416 TINF2Q9BSI4 451 aa14.77□□□□□ -0.05
SNHG1-216ENST00000541416 KANSL2Q9H9L4 492 aa14.77□□□□□ -0.05
SNHG1-216ENST00000541416 IL1RAPL2Q9NP60 686 aa14.77□□□□□ -0.05
SNHG1-216ENST00000541416 ROBO3Q96MS0 1386 aa14.76□□□□□ -0.05
SNHG1-216ENST00000541416 TRIM43BA6NCK2 446 aa14.76□□□□□ -0.05
SNHG1-216ENST00000541416 TMEM132BQ14DG7 1078 aa14.76□□□□□ -0.05
SNHG1-216ENST00000541416 CCDC174Q6PII3 467 aa14.76□□□□□ -0.05
SNHG1-216ENST00000541416 LCORLQ8N3X6 602 aa14.76□□□□□ -0.05
SNHG1-216ENST00000541416 SLC44A5Q8NCS7 719 aa14.76□□□□□ -0.05
SNHG1-216ENST00000541416 MYLIPQ8WY64 445 aa14.76□□□□□ -0.05
SNHG1-216ENST00000541416 TRIM43Q96BQ3 446 aaPredicted RBP14.76□□□□□ -0.05
SNHG1-216ENST00000541416 TSEN34Q9BSV6 310 aaKnown RBP14.76□□□□□ -0.05
SNHG1-216ENST00000541416 TMEM39AQ9NV64 488 aa14.76□□□□□ -0.05
SNHG1-216ENST00000541416 ZNFX1Q9P2E3 1918 aaKnown RBP14.76□□□□□ -0.05
SNHG1-216ENST00000541416 A0A1W2PQ45 241 aaPredicted RBP14.75□□□□□ -0.05
SNHG1-216ENST00000541416 A0A1W2PQY0 241 aa14.75□□□□□ -0.05
SNHG1-216ENST00000541416 TCRBV5S4A2TA0A5A2 114 aa14.75□□□□□ -0.05
SNHG1-216ENST00000541416 DCDC2CA8MYV0 355 aa14.75□□□□□ -0.05
SNHG1-216ENST00000541416 KIAA0355O15063 1070 aa14.75□□□□□ -0.05
SNHG1-216ENST00000541416 RAD21O60216 631 aa14.75□□□□□ -0.05
SNHG1-216ENST00000541416 PQBP1O60828 265 aaKnown RBP14.75□□□□□ -0.05
SNHG1-216ENST00000541416 AKR1B1P15121 316 aa14.75□□□□□ -0.05
SNHG1-216ENST00000541416 STAT3P40763 770 aa14.75□□□□□ -0.05
SNHG1-216ENST00000541416 FPGSQ05932 587 aa14.75□□□□□ -0.05
SNHG1-216ENST00000541416 KIAA1755Q5JYT7 1200 aa14.75□□□□□ -0.05
SNHG1-216ENST00000541416 SH3RF1Q7Z6J0 888 aa14.75□□□□□ -0.05
SNHG1-216ENST00000541416 MSL3Q8N5Y2 521 aaKnown RBP14.75□□□□□ -0.05
SNHG1-216ENST00000541416 DYNLL2Q96FJ2 89 aa14.75□□□□□ -0.05
SNHG1-216ENST00000541416 ARMT1Q9H993 441 aa14.75□□□□□ -0.05
SNHG1-216ENST00000541416 ADAMTS5Q9UNA0 930 aa14.75□□□□□ -0.05
SNHG1-216ENST00000541416 MROH7Q68CQ1 1323 aa14.74□□□□□ -0.05
SNHG1-216ENST00000541416 MBD4O95243 580 aa14.74□□□□□ -0.05
SNHG1-216ENST00000541416 PGK1P00558 417 aa14.74□□□□□ -0.05
SNHG1-216ENST00000541416 CYP2D6P10635 497 aa14.74□□□□□ -0.05
SNHG1-216ENST00000541416 RLBP1P12271 317 aa14.74□□□□□ -0.05
SNHG1-216ENST00000541416 EEF2P13639 858 aaKnown RBP14.74□□□□□ -0.05
SNHG1-216ENST00000541416 CDK8P49336 464 aa14.74□□□□□ -0.05
SNHG1-216ENST00000541416 C12orf60Q5U649 245 aa14.74□□□□□ -0.05
SNHG1-216ENST00000541416 ZSCAN25Q6NSZ9 544 aa14.74□□□□□ -0.05
SNHG1-216ENST00000541416 TOX2Q96NM4 488 aa14.74□□□□□ -0.05
SNHG1-216ENST00000541416 TTYH1Q9H313 450 aaPredicted RBP14.74□□□□□ -0.05
SNHG1-216ENST00000541416 STARD7Q9NQZ5 370 aa14.74□□□□□ -0.05
SNHG1-216ENST00000541416 PAG1Q9NWQ8 432 aa14.74□□□□□ -0.05
SNHG1-216ENST00000541416 PPP1R9AQ9ULJ8 1098 aa14.74□□□□□ -0.05
SNHG1-216ENST00000541416 CDH23Q9H251 3354 aa14.74□□□□□ -0.05
SNHG1-216ENST00000541416 PLXNA1Q9UIW2 1896 aa14.74□□□□□ -0.05
SNHG1-216ENST00000541416 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.73□□□□□ -0.05
SNHG1-216ENST00000541416 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.73□□□□□ -0.05
SNHG1-216ENST00000541416 MOXD2PA6NHM9 499 aa14.73□□□□□ -0.05
SNHG1-216ENST00000541416 APBB1O00213 710 aa14.73□□□□□ -0.05
SNHG1-216ENST00000541416 VWA5AO00534 786 aa14.73□□□□□ -0.05
SNHG1-216ENST00000541416 RAB11FIP3O75154 756 aa14.73□□□□□ -0.05
SNHG1-216ENST00000541416 PGK2P07205 417 aa14.73□□□□□ -0.05
SNHG1-216ENST00000541416 ADD2P35612 726 aa14.73□□□□□ -0.05
SNHG1-216ENST00000541416 ZNF792Q3KQV3 632 aa14.73□□□□□ -0.05
SNHG1-216ENST00000541416 C16orf86Q6ZW13 317 aa14.73□□□□□ -0.05
SNHG1-216ENST00000541416 ANKRD33Q7Z3H0 272 aa14.73□□□□□ -0.05
SNHG1-216ENST00000541416 SIAH1Q8IUQ4 282 aa14.73□□□□□ -0.05
SNHG1-216ENST00000541416 RPAP2Q8IXW5 612 aaPredicted RBP14.73□□□□□ -0.05
SNHG1-216ENST00000541416 DDX11Q96FC9 970 aa14.73□□□□□ -0.05
SNHG1-216ENST00000541416 SPC25Q9HBM1 224 aa14.73□□□□□ -0.05
SNHG1-216ENST00000541416 FAM184BQ9ULE4 1060 aa14.73□□□□□ -0.05
SNHG1-216ENST00000541416 CTDP1Q9Y5B0 961 aaPredicted RBP14.73□□□□□ -0.05
SNHG1-216ENST00000541416 COL11A1P12107 1806 aaPredicted RBP14.73□□□□□ -0.05
SNHG1-216ENST00000541416 PARP14Q460N5 1801 aa14.73□□□□□ -0.05
SNHG1-216ENST00000541416 SMCHD1A6NHR9 2005 aa14.73□□□□□ -0.05
SNHG1-216ENST00000541416 SYNGAP1Q96PV0 1343 aa14.72□□□□□ -0.05
SNHG1-216ENST00000541416 USP17L12C9JPN9 530 aa14.72□□□□□ -0.05
SNHG1-216ENST00000541416 USP17L21D6R901 530 aa14.72□□□□□ -0.05
SNHG1-216ENST00000541416 ACLYP53396 1101 aa14.72□□□□□ -0.05
SNHG1-216ENST00000541416 EVX2Q03828 476 aa14.72□□□□□ -0.05
SNHG1-216ENST00000541416 CLEC10AQ8IUN9 316 aa14.72□□□□□ -0.05
SNHG1-216ENST00000541416 GLT1D1Q96MS3 346 aa14.72□□□□□ -0.05
SNHG1-216ENST00000541416 TEX13BQ9BXU2 312 aa14.72□□□□□ -0.05
SNHG1-216ENST00000541416 BCL11AQ9H165 835 aa14.72□□□□□ -0.05
SNHG1-216ENST00000541416 CHMP4BQ9H444 224 aaKnown RBP14.72□□□□□ -0.05
SNHG1-216ENST00000541416 ZNF214Q9UL59 606 aaPredicted RBP14.72□□□□□ -0.05
SNHG1-216ENST00000541416 BAZ2AQ9UIF9 1905 aaKnown RBP14.71□□□□□ -0.05
SNHG1-216ENST00000541416 PRKAB2O43741 272 aa14.71□□□□□ -0.05
SNHG1-216ENST00000541416 ZNF865P0CJ78 1059 aaPredicted RBP14.71□□□□□ -0.05
SNHG1-216ENST00000541416 UBE3CQ15386 1083 aa14.71□□□□□ -0.05
SNHG1-216ENST00000541416 FAM83BQ5T0W9 1011 aa14.71□□□□□ -0.05
SNHG1-216ENST00000541416 PCSK9Q8NBP7 692 aaKnown RBP14.71□□□□□ -0.05
SNHG1-216ENST00000541416 SLF1Q9BQI6 1058 aa14.71□□□□□ -0.05
SNHG1-216ENST00000541416 BOLA2Q9H3K6 86 aa14.71□□□□□ -0.05
SNHG1-216ENST00000541416 FBXO28Q9NVF7 368 aa14.71□□□□□ -0.05
SNHG1-216ENST00000541416 ARPP21Q9UBL0 812 aaPredicted RBP14.71□□□□□ -0.05
SNHG1-216ENST00000541416 SLC4A4Q9Y6R1 1079 aa14.71□□□□□ -0.05
SNHG1-216ENST00000541416 ELP1O95163 1332 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms