RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 E2F4Q16254 413 aa10.93□□□□□ -0.66
DDX55-208ENST00000541259 KIAA1755Q5JYT7 1200 aa10.93□□□□□ -0.66
DDX55-208ENST00000541259 APOA5Q6Q788 366 aa10.93□□□□□ -0.66
DDX55-208ENST00000541259 CCDC144CPQ8IYA2 1237 aa10.93□□□□□ -0.66
DDX55-208ENST00000541259 TMTC2Q8N394 836 aa10.93□□□□□ -0.66
DDX55-208ENST00000541259 C2orf69Q8N8R5 385 aa10.93□□□□□ -0.66
DDX55-208ENST00000541259 NECAB1Q8N987 351 aa10.93□□□□□ -0.66
DDX55-208ENST00000541259 PNMA1Q8ND90 353 aa10.93□□□□□ -0.66
DDX55-208ENST00000541259 CSADQ9Y600 493 aa10.93□□□□□ -0.66
DDX55-208ENST00000541259 SLC12A7Q9Y666 1083 aa10.93□□□□□ -0.66
DDX55-208ENST00000541259 ZHX2Q9Y6X8 837 aa10.93□□□□□ -0.66
DDX55-208ENST00000541259 ZBTB43O43298 467 aa10.92□□□□□ -0.66
DDX55-208ENST00000541259 SLC4A3P48751 1232 aa10.92□□□□□ -0.66
DDX55-208ENST00000541259 FKBP1BP68106 108 aa10.92□□□□□ -0.66
DDX55-208ENST00000541259 ST3GAL1Q11201 340 aa10.92□□□□□ -0.66
DDX55-208ENST00000541259 TROAPQ12815 778 aa10.92□□□□□ -0.66
DDX55-208ENST00000541259 SPP2Q13103 211 aa10.92□□□□□ -0.66
DDX55-208ENST00000541259 MFSD10Q14728 455 aa10.92□□□□□ -0.66
DDX55-208ENST00000541259 CATIPQ7Z7H3 387 aa10.92□□□□□ -0.66
DDX55-208ENST00000541259 MICU3Q86XE3 530 aa10.92□□□□□ -0.66
DDX55-208ENST00000541259 NUP133Q8WUM0 1156 aa10.92□□□□□ -0.66
DDX55-208ENST00000541259 SLC10A4Q96EP9 437 aa10.92□□□□□ -0.66
DDX55-208ENST00000541259 ZNF274Q96GC6 653 aaPredicted RBP10.92□□□□□ -0.66
DDX55-208ENST00000541259 TMX3Q96JJ7 454 aa10.92□□□□□ -0.66
DDX55-208ENST00000541259 WDR18Q9BV38 432 aa10.92□□□□□ -0.66
DDX55-208ENST00000541259 NCOA5Q9HCD5 579 aaKnown RBP10.92□□□□□ -0.66
DDX55-208ENST00000541259 ARHGEF10LQ9HCE6 1279 aa10.92□□□□□ -0.66
DDX55-208ENST00000541259 TMX2Q9Y320 296 aa10.92□□□□□ -0.66
DDX55-208ENST00000541259 AFG3L2Q9Y4W6 797 aa10.92□□□□□ -0.66
DDX55-208ENST00000541259 PARP14Q460N5 1801 aa10.92□□□□□ -0.66
DDX55-208ENST00000541259 SMCHD1A6NHR9 2005 aa10.92□□□□□ -0.66
DDX55-208ENST00000541259 TRIM75PA6NK02 468 aa10.91□□□□□ -0.66
DDX55-208ENST00000541259 GOLGA8BA8MQT2 603 aa10.91□□□□□ -0.66
DDX55-208ENST00000541259 K7ELQ4 463 aaPredicted RBP10.91□□□□□ -0.66
DDX55-208ENST00000541259 RAD21O60216 631 aa10.91□□□□□ -0.66
DDX55-208ENST00000541259 PFKFB2O60825 505 aa10.91□□□□□ -0.66
DDX55-208ENST00000541259 CDC27P30260 824 aa10.91□□□□□ -0.66
DDX55-208ENST00000541259 GJA5P36382 358 aa10.91□□□□□ -0.66
DDX55-208ENST00000541259 ANP32AP39687 249 aaKnown RBP10.91□□□□□ -0.66
DDX55-208ENST00000541259 MCM2P49736 904 aa10.91□□□□□ -0.66
DDX55-208ENST00000541259 HUNKP57058 714 aa10.91□□□□□ -0.66
DDX55-208ENST00000541259 SCRN1Q12765 414 aa10.91□□□□□ -0.66
DDX55-208ENST00000541259 FSTL1Q12841 308 aa10.91□□□□□ -0.66
DDX55-208ENST00000541259 PPP4R3BQ5MIZ7 849 aa10.91□□□□□ -0.66
DDX55-208ENST00000541259 SYNE3Q6ZMZ3 975 aa10.91□□□□□ -0.66
DDX55-208ENST00000541259 HSCBQ8IWL3 235 aa10.91□□□□□ -0.66
DDX55-208ENST00000541259 ZNF280CQ8ND82 737 aa10.91□□□□□ -0.66
DDX55-208ENST00000541259 IL27Q8NEV9 243 aa10.91□□□□□ -0.66
DDX55-208ENST00000541259 OPTNQ96CV9 577 aa10.91□□□□□ -0.66
DDX55-208ENST00000541259 OTUD5Q96G74 571 aa10.91□□□□□ -0.66
DDX55-208ENST00000541259 ZSCAN31Q96LW9 406 aaPredicted RBP10.91□□□□□ -0.66
DDX55-208ENST00000541259 EMILIN3Q9NT22 766 aa10.91□□□□□ -0.66
DDX55-208ENST00000541259 FAM217BQ9NTX9 383 aaPredicted RBP10.91□□□□□ -0.66
DDX55-208ENST00000541259 RLFQ13129 1914 aa10.9□□□□□ -0.66
DDX55-208ENST00000541259 SPDYE5A6NIY4 337 aa10.9□□□□□ -0.66
DDX55-208ENST00000541259 GOLGA8AA7E2F4 631 aa10.9□□□□□ -0.66
DDX55-208ENST00000541259 USP17L10C9JJH3 530 aa10.9□□□□□ -0.66
DDX55-208ENST00000541259 F5H6K3 240 aa10.9□□□□□ -0.66
DDX55-208ENST00000541259 IRF6O14896 467 aa10.9□□□□□ -0.66
DDX55-208ENST00000541259 PPFIA3O75145 1194 aa10.9□□□□□ -0.66
DDX55-208ENST00000541259 DDAH1O94760 285 aa10.9□□□□□ -0.66
DDX55-208ENST00000541259 NDUFB10O96000 172 aa10.9□□□□□ -0.66
DDX55-208ENST00000541259 GOLGA8HP0CJ92 632 aa10.9□□□□□ -0.66
DDX55-208ENST00000541259 PDHBP11177 359 aa10.9□□□□□ -0.66
DDX55-208ENST00000541259 ADD1P35611 737 aaKnown RBP10.9□□□□□ -0.66
DDX55-208ENST00000541259 METAP2P50579 478 aaKnown RBP eCLIP10.9□□□□□ -0.66
DDX55-208ENST00000541259 PPATQ06203 517 aa10.9□□□□□ -0.66
DDX55-208ENST00000541259 KLRC3Q07444 240 aa10.9□□□□□ -0.66
DDX55-208ENST00000541259 MTMR2Q13614 643 aa10.9□□□□□ -0.66
DDX55-208ENST00000541259 PPP1R15BQ5SWA1 713 aa10.9□□□□□ -0.66
DDX55-208ENST00000541259 SLFN13Q68D06 897 aa10.9□□□□□ -0.66
DDX55-208ENST00000541259 USP17L2Q6R6M4 530 aa10.9□□□□□ -0.66
DDX55-208ENST00000541259 SAPCD2Q86UD0 394 aa10.9□□□□□ -0.66
DDX55-208ENST00000541259 ERO1BQ86YB8 467 aa10.9□□□□□ -0.66
DDX55-208ENST00000541259 CCDC83Q8IWF9 413 aa10.9□□□□□ -0.66
DDX55-208ENST00000541259 SPICE1Q8N0Z3 855 aa10.9□□□□□ -0.66
DDX55-208ENST00000541259 CMTR1Q8N1G2 835 aaKnown RBP10.9□□□□□ -0.66
DDX55-208ENST00000541259 STAG2Q8N3U4 1231 aa10.9□□□□□ -0.66
DDX55-208ENST00000541259 FANCBQ8NB91 859 aa10.9□□□□□ -0.66
DDX55-208ENST00000541259 NUP88Q99567 741 aaPredicted RBP10.9□□□□□ -0.66
DDX55-208ENST00000541259 FEZ1Q99689 392 aa10.9□□□□□ -0.66
DDX55-208ENST00000541259 SLKQ9H2G2 1235 aaPredicted RBP10.9□□□□□ -0.66
DDX55-208ENST00000541259 VCPKMTQ9H867 229 aa10.9□□□□□ -0.66
DDX55-208ENST00000541259 AS3MTQ9HBK9 375 aa10.9□□□□□ -0.66
DDX55-208ENST00000541259 MAD2L2Q9UI95 211 aa10.9□□□□□ -0.66
DDX55-208ENST00000541259 COL11A1P12107 1806 aaPredicted RBP10.9□□□□□ -0.66
DDX55-208ENST00000541259 LOC285556D6RIA3 1793 aa10.9□□□□□ -0.67
DDX55-208ENST00000541259 FRMPD2Q68DX3 1309 aaPredicted RBP10.89□□□□□ -0.67
DDX55-208ENST00000541259 UNCXA6NJT0 531 aa10.89□□□□□ -0.67
DDX55-208ENST00000541259 CTDNEP1O95476 244 aa10.89□□□□□ -0.67
DDX55-208ENST00000541259 SNHG28P0DPA3 235 aa10.89□□□□□ -0.67
DDX55-208ENST00000541259 HMGCS2P54868 508 aa10.89□□□□□ -0.67
DDX55-208ENST00000541259 BACE1P56817 501 aa10.89□□□□□ -0.67
DDX55-208ENST00000541259 PPIL2Q13356 520 aa10.89□□□□□ -0.67
DDX55-208ENST00000541259 GRM4Q14833 912 aa10.89□□□□□ -0.67
DDX55-208ENST00000541259 RTN1Q16799 776 aa10.89□□□□□ -0.67
DDX55-208ENST00000541259 TTBK2Q6IQ55 1244 aa10.89□□□□□ -0.67
DDX55-208ENST00000541259 KCTD1Q719H9 257 aa10.89□□□□□ -0.67
DDX55-208ENST00000541259 NBPF11Q86T75 865 aa10.89□□□□□ -0.67
DDX55-208ENST00000541259 GMCL1P1Q8NEA9 526 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms