RNA–Protein interactions for RNA: ENST00000541110.5

TRERF1-205, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 7,646 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-205ENST00000541110 HACD3Q9P035 362 aa11.02□□□□□ -0.65
TRERF1-205ENST00000541110 BCAP29Q9UHQ4 241 aa11.02□□□□□ -0.65
TRERF1-205ENST00000541110 PYGLP06737 847 aa11.02□□□□□ -0.65
TRERF1-205ENST00000541110 PPP1R2P41236 205 aa11.02□□□□□ -0.65
TRERF1-205ENST00000541110 FASTKD5Q7L8L6 764 aaKnown RBP11.02□□□□□ -0.65
TRERF1-205ENST00000541110 POLKQ9UBT6 870 aa11.02□□□□□ -0.65
TRERF1-205ENST00000541110 SUGT1Q9Y2Z0 365 aa11.02□□□□□ -0.65
TRERF1-205ENST00000541110 ELP1O95163 1332 aa11.02□□□□□ -0.65
TRERF1-205ENST00000541110 SYNRGQ9UMZ2 1314 aa11.02□□□□□ -0.65
TRERF1-205ENST00000541110 A0A1B0GVL5 298 aa11.02□□□□□ -0.65
TRERF1-205ENST00000541110 CYP26C1Q6V0L0 522 aa11.02□□□□□ -0.65
TRERF1-205ENST00000541110 MEIS3Q99687 375 aa11.02□□□□□ -0.65
TRERF1-205ENST00000541110 NEUROG2Q9H2A3 272 aa11.02□□□□□ -0.65
TRERF1-205ENST00000541110 GSTA4O15217 222 aa11.01□□□□□ -0.65
TRERF1-205ENST00000541110 GTF2IP78347 998 aa11.01□□□□□ -0.65
TRERF1-205ENST00000541110 DOK7Q18PE1 504 aa11.01□□□□□ -0.65
TRERF1-205ENST00000541110 XKR9Q5GH70 373 aa11.01□□□□□ -0.65
TRERF1-205ENST00000541110 SYCE1Q8N0S2 351 aa11.01□□□□□ -0.65
TRERF1-205ENST00000541110 RABEP2Q9H5N1 569 aa11.01□□□□□ -0.65
TRERF1-205ENST00000541110 SEPT9Q9UHD8 586 aaPredicted RBP11.01□□□□□ -0.65
TRERF1-205ENST00000541110 PCDHB13Q9Y5F0 798 aa11.01□□□□□ -0.65
TRERF1-205ENST00000541110 CEP104O60308 925 aa11.01□□□□□ -0.65
TRERF1-205ENST00000541110 BAG2O95816 211 aa11.01□□□□□ -0.65
TRERF1-205ENST00000541110 RNF219Q5W0B1 726 aaPredicted RBP11.01□□□□□ -0.65
TRERF1-205ENST00000541110 BRAPQ7Z569 592 aa11.01□□□□□ -0.65
TRERF1-205ENST00000541110 CPSF2Q9P2I0 782 aaKnown RBP11.01□□□□□ -0.65
TRERF1-205ENST00000541110 PPIP5K1Q6PFW1 1433 aa11.01□□□□□ -0.65
TRERF1-205ENST00000541110 ANKRD20A3Q5VUR7 823 aa11.01□□□□□ -0.65
TRERF1-205ENST00000541110 SYT10Q6XYQ8 523 aa11.01□□□□□ -0.65
TRERF1-205ENST00000541110 SNX25Q9H3E2 840 aa11.01□□□□□ -0.65
TRERF1-205ENST00000541110 MAD1L1Q9Y6D9 718 aa11.01□□□□□ -0.65
TRERF1-205ENST00000541110 V9GY48 417 aaPredicted RBP11.01□□□□□ -0.65
TRERF1-205ENST00000541110 FLOT1O75955 427 aa11.01□□□□□ -0.65
TRERF1-205ENST00000541110 FAM160B1Q5W0V3 765 aa11.01□□□□□ -0.65
TRERF1-205ENST00000541110 CREB3L3Q68CJ9 461 aa11.01□□□□□ -0.65
TRERF1-205ENST00000541110 CCDC13Q8IYE1 715 aa11.01□□□□□ -0.65
TRERF1-205ENST00000541110 ANXA13P27216 316 aa11.01□□□□□ -0.65
TRERF1-205ENST00000541110 CTDSPL2Q05D32 466 aa11.01□□□□□ -0.65
TRERF1-205ENST00000541110 HINFPQ9BQA5 517 aa11.01□□□□□ -0.65
TRERF1-205ENST00000541110 METTL14Q9HCE5 456 aaKnown RBP11.01□□□□□ -0.65
TRERF1-205ENST00000541110 TMEM191BP0C7N4 346 aa11.01□□□□□ -0.65
TRERF1-205ENST00000541110 GARSP41250 739 aaKnown RBP11.01□□□□□ -0.65
TRERF1-205ENST00000541110 PEX26Q7Z412 305 aa11.01□□□□□ -0.65
TRERF1-205ENST00000541110 RNF10Q8N5U6 811 aaKnown RBP11.01□□□□□ -0.65
TRERF1-205ENST00000541110 TSPOAP1O95153 1857 aa11□□□□□ -0.65
TRERF1-205ENST00000541110 OPHN1O60890 802 aa11□□□□□ -0.65
TRERF1-205ENST00000541110 IGSF22Q8N9C0 903 aa11□□□□□ -0.65
TRERF1-205ENST00000541110 CHURC1Q8WUH1 139 aa11□□□□□ -0.65
TRERF1-205ENST00000541110 NLRP7Q8WX94 980 aa11□□□□□ -0.65
TRERF1-205ENST00000541110 FIS1Q9Y3D6 152 aa11□□□□□ -0.65
TRERF1-205ENST00000541110 USH1CQ9Y6N9 552 aa11□□□□□ -0.65
TRERF1-205ENST00000541110 A0A1B0GUL7 405 aa11□□□□□ -0.65
TRERF1-205ENST00000541110 K7ENM7 598 aa11□□□□□ -0.65
TRERF1-205ENST00000541110 TUBB4BP68371 445 aa11□□□□□ -0.65
TRERF1-205ENST00000541110 PPP2R3AQ06190 1150 aa11□□□□□ -0.65
TRERF1-205ENST00000541110 LONRF3Q496Y0 759 aa11□□□□□ -0.65
TRERF1-205ENST00000541110 C2CD5Q86YS7 1000 aa11□□□□□ -0.65
TRERF1-205ENST00000541110 TYRO3Q06418 890 aa11□□□□□ -0.65
TRERF1-205ENST00000541110 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11□□□□□ -0.65
TRERF1-205ENST00000541110 ARHGEF1Q92888 912 aaKnown RBP11□□□□□ -0.65
TRERF1-205ENST00000541110 PIDD1Q9HB75 910 aa11□□□□□ -0.65
TRERF1-205ENST00000541110 DEXIO95424 95 aa11□□□□□ -0.65
TRERF1-205ENST00000541110 SRGAP2BP0DMP2 458 aa11□□□□□ -0.65
TRERF1-205ENST00000541110 SCNN1DP51172 638 aa11□□□□□ -0.65
TRERF1-205ENST00000541110 TSNAXIP1Q2TAA8 658 aa11□□□□□ -0.65
TRERF1-205ENST00000541110 RUFY3Q7L099 469 aa11□□□□□ -0.65
TRERF1-205ENST00000541110 ARMC9Q7Z3E5 817 aa11□□□□□ -0.65
TRERF1-205ENST00000541110 ABCB4P21439 1286 aa11□□□□□ -0.65
TRERF1-205ENST00000541110 ANKRD42Q8N9B4 389 aa11□□□□□ -0.65
TRERF1-205ENST00000541110 TEKT2Q9UIF3 430 aa11□□□□□ -0.65
TRERF1-205ENST00000541110 GIGYF1O75420 1035 aaPredicted RBP11□□□□□ -0.65
TRERF1-205ENST00000541110 SOX5P35711 763 aa11□□□□□ -0.65
TRERF1-205ENST00000541110 C20orf194Q5TEA3 1177 aa11□□□□□ -0.65
TRERF1-205ENST00000541110 B4GALNT4Q76KP1 1039 aa11□□□□□ -0.65
TRERF1-205ENST00000541110 CERS3Q8IU89 383 aa11□□□□□ -0.65
TRERF1-205ENST00000541110 ESYT1Q9BSJ8 1104 aa11□□□□□ -0.65
TRERF1-205ENST00000541110 KCNG1Q9UIX4 513 aa11□□□□□ -0.65
TRERF1-205ENST00000541110 THRAP3Q9Y2W1 955 aaKnown RBP11□□□□□ -0.65
TRERF1-205ENST00000541110 DHX29Q7Z478 1369 aaKnown RBP10.99□□□□□ -0.65
TRERF1-205ENST00000541110 TNRQ92752 1358 aa10.99□□□□□ -0.65
TRERF1-205ENST00000541110 BLVRAP53004 296 aa10.99□□□□□ -0.65
TRERF1-205ENST00000541110 EPHB1P54762 984 aa10.99□□□□□ -0.65
TRERF1-205ENST00000541110 PAK1Q13153 545 aa10.99□□□□□ -0.65
TRERF1-205ENST00000541110 PPP1R16BQ96T49 567 aa10.99□□□□□ -0.65
TRERF1-205ENST00000541110 SCHIP1Q9P0W5 487 aaPredicted RBP10.99□□□□□ -0.65
TRERF1-205ENST00000541110 ATICP31939 592 aa10.99□□□□□ -0.65
TRERF1-205ENST00000541110 LONRF2Q1L5Z9 754 aa10.99□□□□□ -0.65
TRERF1-205ENST00000541110 TTLL7Q6ZT98 887 aa10.99□□□□□ -0.65
TRERF1-205ENST00000541110 YIPF2Q9BWQ6 316 aa10.99□□□□□ -0.65
TRERF1-205ENST00000541110 TBC1D2Q9BYX2 928 aa10.99□□□□□ -0.65
TRERF1-205ENST00000541110 P3H4Q92791 437 aa10.99□□□□□ -0.65
TRERF1-205ENST00000541110 PDE8AO60658 829 aa10.99□□□□□ -0.65
TRERF1-205ENST00000541110 TTC4O95801 387 aa10.99□□□□□ -0.65
TRERF1-205ENST00000541110 PSMD2Q13200 908 aa10.99□□□□□ -0.65
TRERF1-205ENST00000541110 DHX32Q7L7V1 743 aaKnown RBP10.99□□□□□ -0.65
TRERF1-205ENST00000541110 AFAP1L1Q8TED9 768 aa10.99□□□□□ -0.65
TRERF1-205ENST00000541110 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.99□□□□□ -0.65
TRERF1-205ENST00000541110 TTC25Q96NG3 672 aa10.99□□□□□ -0.65
TRERF1-205ENST00000541110 VPS41P49754 854 aa10.99□□□□□ -0.65
TRERF1-205ENST00000541110 ZBTB41Q5SVQ8 909 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms