RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 SGSM2O43147 1006 aa15.51■□□□□ 0.07
LTBR-208ENST00000541005 RANBP6O60518 1105 aaKnown RBP15.51■□□□□ 0.07
LTBR-208ENST00000541005 FAM83BQ5T0W9 1011 aa15.51■□□□□ 0.07
LTBR-208ENST00000541005 ERICH6BQ5W0A0 696 aa15.51■□□□□ 0.07
LTBR-208ENST00000541005 MFSD6Q6ZSS7 791 aa15.51■□□□□ 0.07
LTBR-208ENST00000541005 LRRC47Q8N1G4 583 aaKnown RBP15.51■□□□□ 0.07
LTBR-208ENST00000541005 PXYLP1Q8TE99 480 aa15.51■□□□□ 0.07
LTBR-208ENST00000541005 SOCS4Q8WXH5 440 aa15.51■□□□□ 0.07
LTBR-208ENST00000541005 PORCNQ9H237 461 aa15.51■□□□□ 0.07
LTBR-208ENST00000541005 PPP1R9AQ9ULJ8 1098 aa15.51■□□□□ 0.07
LTBR-208ENST00000541005 FRMPD3Q5JV73 1810 aa15.51■□□□□ 0.07
LTBR-208ENST00000541005 SMCHD1A6NHR9 2005 aa15.51■□□□□ 0.07
LTBR-208ENST00000541005 NEDD4P46934 1319 aa15.5■□□□□ 0.07
LTBR-208ENST00000541005 ZNF213O14771 459 aa15.5■□□□□ 0.07
LTBR-208ENST00000541005 GRK4P32298 578 aa15.5■□□□□ 0.07
LTBR-208ENST00000541005 GPR142Q7Z601 462 aa15.5■□□□□ 0.07
LTBR-208ENST00000541005 SHCBP1Q8NEM2 672 aa15.5■□□□□ 0.07
LTBR-208ENST00000541005 ATG4CQ96DT6 458 aa15.5■□□□□ 0.07
LTBR-208ENST00000541005 ADCY3O60266 1144 aa15.49■□□□□ 0.07
LTBR-208ENST00000541005 NMT2O60551 498 aa15.49■□□□□ 0.07
LTBR-208ENST00000541005 SOX10P56693 466 aa15.49■□□□□ 0.07
LTBR-208ENST00000541005 IMMTQ16891 758 aaKnown RBP15.49■□□□□ 0.07
LTBR-208ENST00000541005 MORN1Q5T089 497 aa15.49■□□□□ 0.07
LTBR-208ENST00000541005 PLEKHH3Q7Z736 793 aa15.49■□□□□ 0.07
LTBR-208ENST00000541005 SH3TC2Q8TF17 1288 aa15.49■□□□□ 0.07
LTBR-208ENST00000541005 USP6NLQ92738 828 aa15.49■□□□□ 0.07
LTBR-208ENST00000541005 GMCL1Q96IK5 515 aa15.49■□□□□ 0.07
LTBR-208ENST00000541005 NUP88Q99567 741 aaPredicted RBP15.49■□□□□ 0.07
LTBR-208ENST00000541005 SLF1Q9BQI6 1058 aa15.49■□□□□ 0.07
LTBR-208ENST00000541005 SPATC1LQ9H0A9 340 aa15.49■□□□□ 0.07
LTBR-208ENST00000541005 FBXO28Q9NVF7 368 aa15.49■□□□□ 0.07
LTBR-208ENST00000541005 VWA5AO00534 786 aa15.48■□□□□ 0.07
LTBR-208ENST00000541005 XRCC5P13010 732 aaKnown RBP15.48■□□□□ 0.07
LTBR-208ENST00000541005 RRP12Q5JTH9 1297 aaKnown RBP15.48■□□□□ 0.07
LTBR-208ENST00000541005 SLFN13Q68D06 897 aa15.48■□□□□ 0.07
LTBR-208ENST00000541005 SKAP1Q86WV1 359 aa15.48■□□□□ 0.07
LTBR-208ENST00000541005 REPS2Q8NFH8 660 aa15.48■□□□□ 0.07
LTBR-208ENST00000541005 ESR2Q92731 530 aa15.48■□□□□ 0.07
LTBR-208ENST00000541005 NUDT12Q9BQG2 462 aa15.48■□□□□ 0.07
LTBR-208ENST00000541005 TOMM22Q9NS69 142 aa15.48■□□□□ 0.07
LTBR-208ENST00000541005 STX8Q9UNK0 236 aa15.48■□□□□ 0.07
LTBR-208ENST00000541005 RAD21O60216 631 aa15.47■□□□□ 0.07
LTBR-208ENST00000541005 PTH1RQ03431 593 aa15.47■□□□□ 0.07
LTBR-208ENST00000541005 GRB14Q14449 540 aa15.47■□□□□ 0.07
LTBR-208ENST00000541005 TMEM132BQ14DG7 1078 aa15.47■□□□□ 0.07
LTBR-208ENST00000541005 CCAR1Q8IX12 1150 aaKnown RBP15.47■□□□□ 0.07
LTBR-208ENST00000541005 NKX2-3Q8TAU0 364 aa15.47■□□□□ 0.07
LTBR-208ENST00000541005 TTC14Q96N46 770 aa15.47■□□□□ 0.07
LTBR-208ENST00000541005 MOV10L1Q9BXT6 1211 aaKnown RBP15.47■□□□□ 0.07
LTBR-208ENST00000541005 FEM1BQ9UK73 627 aa15.47■□□□□ 0.07
LTBR-208ENST00000541005 ZNF214Q9UL59 606 aaPredicted RBP15.47■□□□□ 0.07
LTBR-208ENST00000541005 MCM3APO60318 1980 aa15.47■□□□□ 0.07
LTBR-208ENST00000541005 SLC15A5A6NIM6 579 aa15.46■□□□□ 0.07
LTBR-208ENST00000541005 PLA2G6O60733 806 aa15.46■□□□□ 0.07
LTBR-208ENST00000541005 TOP1P11387 765 aaKnown RBP15.46■□□□□ 0.07
LTBR-208ENST00000541005 BMP3P12645 472 aa15.46■□□□□ 0.07
LTBR-208ENST00000541005 ELNP15502 786 aa15.46■□□□□ 0.07
LTBR-208ENST00000541005 PTPREP23469 700 aa15.46■□□□□ 0.07
LTBR-208ENST00000541005 RGS2P41220 211 aa15.46■□□□□ 0.07
LTBR-208ENST00000541005 UBXN2AP68543 259 aa15.46■□□□□ 0.07
LTBR-208ENST00000541005 RCSD1Q6JBY9 416 aa15.46■□□□□ 0.07
LTBR-208ENST00000541005 PRPF38AQ8NAV1 312 aaKnown RBP15.46■□□□□ 0.07
LTBR-208ENST00000541005 APBA2Q99767 749 aa15.46■□□□□ 0.07
LTBR-208ENST00000541005 ESYT1Q9BSJ8 1104 aa15.46■□□□□ 0.07
LTBR-208ENST00000541005 MROH8Q9H579 483 aa15.46■□□□□ 0.07
LTBR-208ENST00000541005 CNNM2Q9H8M5 875 aa15.46■□□□□ 0.07
LTBR-208ENST00000541005 U3KPZ7 1027 aaPredicted RBP15.46■□□□□ 0.07
LTBR-208ENST00000541005 BRCA2P51587 3418 aa15.46■□□□□ 0.06
LTBR-208ENST00000541005 ATP2A1O14983 1001 aa15.45■□□□□ 0.06
LTBR-208ENST00000541005 SLC25A27O95847 323 aa15.45■□□□□ 0.06
LTBR-208ENST00000541005 HMGCRP04035 888 aa15.45■□□□□ 0.06
LTBR-208ENST00000541005 INHAP05111 366 aa15.45■□□□□ 0.06
LTBR-208ENST00000541005 HOXC6P09630 235 aa15.45■□□□□ 0.06
LTBR-208ENST00000541005 ERCC3P19447 782 aa15.45■□□□□ 0.06
LTBR-208ENST00000541005 COPB2P35606 906 aa15.45■□□□□ 0.06
LTBR-208ENST00000541005 SLC1A4P43007 532 aa15.45■□□□□ 0.06
LTBR-208ENST00000541005 MAP2K5Q13163 448 aa15.45■□□□□ 0.06
LTBR-208ENST00000541005 RIOX2Q8IUF8 465 aa15.45■□□□□ 0.06
LTBR-208ENST00000541005 TRMT44Q8IYL2 757 aaKnown RBP15.45■□□□□ 0.06
LTBR-208ENST00000541005 MAP4K1Q92918 833 aa15.45■□□□□ 0.06
LTBR-208ENST00000541005 TMEM47Q9BQJ4 181 aa15.45■□□□□ 0.06
LTBR-208ENST00000541005 KRT23Q9C075 422 aa15.45■□□□□ 0.06
LTBR-208ENST00000541005 LCTP09848 1927 aa15.45■□□□□ 0.06
LTBR-208ENST00000541005 POTEFA5A3E0 1075 aa15.44■□□□□ 0.06
LTBR-208ENST00000541005 B4E1Z4 1266 aa15.44■□□□□ 0.06
LTBR-208ENST00000541005 STRNO43815 780 aa15.44■□□□□ 0.06
LTBR-208ENST00000541005 KDM4AO75164 1064 aa15.44■□□□□ 0.06
LTBR-208ENST00000541005 CYP21A2P08686 494 aa15.44■□□□□ 0.06
LTBR-208ENST00000541005 FDX1P10109 184 aa15.44■□□□□ 0.06
LTBR-208ENST00000541005 STAT2P52630 851 aa15.44■□□□□ 0.06
LTBR-208ENST00000541005 MTFR1Q15390 333 aa15.44■□□□□ 0.06
LTBR-208ENST00000541005 CCDC178Q5BJE1 867 aa15.44■□□□□ 0.06
LTBR-208ENST00000541005 FAM160B2Q86V87 743 aa15.44■□□□□ 0.06
LTBR-208ENST00000541005 IQCA1Q86XH1 822 aa15.44■□□□□ 0.06
LTBR-208ENST00000541005 DGKHQ86XP1 1220 aa15.44■□□□□ 0.06
LTBR-208ENST00000541005 ABRAQ8N0Z2 381 aa15.44■□□□□ 0.06
LTBR-208ENST00000541005 DCAF4Q8WV16 495 aa15.44■□□□□ 0.06
LTBR-208ENST00000541005 TRIB2Q92519 343 aa15.44■□□□□ 0.06
LTBR-208ENST00000541005 ANKS1AQ92625 1134 aa15.44■□□□□ 0.06
LTBR-208ENST00000541005 TMEM106CQ9BVX2 250 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms