RNA–Protein interactions for RNA: ENST00000540815.2

LGR5-203, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 1 (best) BASIC

Gene LGR5, Length 2,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-203ENST00000540815 GGA1Q9UJY5 639 aa12.89□□□□□ -0.35
LGR5-203ENST00000540815 ADAMTS3O15072 1205 aa12.89□□□□□ -0.35
LGR5-203ENST00000540815 LMOD1P29536 600 aaPredicted RBP12.89□□□□□ -0.35
LGR5-203ENST00000540815 TTC38Q5R3I4 469 aa12.89□□□□□ -0.35
LGR5-203ENST00000540815 TRIML1Q8N9V2 468 aa12.89□□□□□ -0.35
LGR5-203ENST00000540815 FBXO41Q8TF61 875 aa12.89□□□□□ -0.35
LGR5-203ENST00000540815 BBOX1O75936 387 aa12.88□□□□□ -0.35
LGR5-203ENST00000540815 PRR29P0C7W0 189 aa12.88□□□□□ -0.35
LGR5-203ENST00000540815 BMP6P22004 513 aa12.88□□□□□ -0.35
LGR5-203ENST00000540815 TRAPPC10P48553 1259 aa12.88□□□□□ -0.35
LGR5-203ENST00000540815 USP49Q70CQ1 688 aa12.88□□□□□ -0.35
LGR5-203ENST00000540815 CCDC150Q8NCX0 1101 aa12.88□□□□□ -0.35
LGR5-203ENST00000540815 TGFBRAP1Q8WUH2 860 aa12.88□□□□□ -0.35
LGR5-203ENST00000540815 SMARCE1Q969G3 411 aa12.88□□□□□ -0.35
LGR5-203ENST00000540815 CCDC34Q96HJ3 373 aa12.88□□□□□ -0.35
LGR5-203ENST00000540815 MKNK2Q9HBH9 465 aa12.88□□□□□ -0.35
LGR5-203ENST00000540815 FHOD1Q9Y613 1164 aa12.88□□□□□ -0.35
LGR5-203ENST00000540815 LTBP1Q14766 1721 aa12.88□□□□□ -0.35
LGR5-203ENST00000540815 CBFA2T2O43439 604 aa12.88□□□□□ -0.35
LGR5-203ENST00000540815 HOXA10P31260 410 aaPredicted RBP12.88□□□□□ -0.35
LGR5-203ENST00000540815 PLA2G4AP47712 749 aa12.88□□□□□ -0.35
LGR5-203ENST00000540815 CLCN6P51797 869 aa12.88□□□□□ -0.35
LGR5-203ENST00000540815 NLRP5P59047 1200 aa12.88□□□□□ -0.35
LGR5-203ENST00000540815 MORC3Q14149 939 aa12.88□□□□□ -0.35
LGR5-203ENST00000540815 GRM4Q14833 912 aa12.88□□□□□ -0.35
LGR5-203ENST00000540815 TMC6Q7Z403 805 aa12.88□□□□□ -0.35
LGR5-203ENST00000540815 PNMA1Q8ND90 353 aa12.88□□□□□ -0.35
LGR5-203ENST00000540815 KCND1Q9NSA2 647 aa12.88□□□□□ -0.35
LGR5-203ENST00000540815 DACH1Q9UI36 760 aa12.88□□□□□ -0.35
LGR5-203ENST00000540815 ATP2C1P98194 919 aaPredicted RBP12.87□□□□□ -0.35
LGR5-203ENST00000540815 PROM2Q8N271 834 aa12.87□□□□□ -0.35
LGR5-203ENST00000540815 MLKLQ8NB16 471 aa12.87□□□□□ -0.35
LGR5-203ENST00000540815 SPATA20Q8TB22 786 aa12.87□□□□□ -0.35
LGR5-203ENST00000540815 SH3GLB2Q9NR46 395 aa12.87□□□□□ -0.35
LGR5-203ENST00000540815 GPR75-ASB3A0A0A6YYF3 556 aa12.87□□□□□ -0.35
LGR5-203ENST00000540815 ATP1A3P13637 1013 aa12.87□□□□□ -0.35
LGR5-203ENST00000540815 BTDP43251 543 aa12.87□□□□□ -0.35
LGR5-203ENST00000540815 GNAQP50148 359 aa12.87□□□□□ -0.35
LGR5-203ENST00000540815 SLC44A5Q8NCS7 719 aa12.87□□□□□ -0.35
LGR5-203ENST00000540815 SECISBP2LQ93073 1101 aaKnown RBP12.87□□□□□ -0.35
LGR5-203ENST00000540815 CRAMP1Q96RY5 1269 aa12.87□□□□□ -0.35
LGR5-203ENST00000540815 QTRT2Q9H974 415 aaKnown RBP12.87□□□□□ -0.35
LGR5-203ENST00000540815 FOCADQ5VW36 1801 aa12.86□□□□□ -0.35
LGR5-203ENST00000540815 LOC102724159A0A0B4J2E5 919 aa12.86□□□□□ -0.35
LGR5-203ENST00000540815 POLRMTO00411 1230 aaKnown RBP12.86□□□□□ -0.35
LGR5-203ENST00000540815 TRIM37O94972 964 aa12.86□□□□□ -0.35
LGR5-203ENST00000540815 TSPY3P0CV98 308 aa12.86□□□□□ -0.35
LGR5-203ENST00000540815 TSPY8P0CW00 308 aa12.86□□□□□ -0.35
LGR5-203ENST00000540815 CALML3P27482 149 aa12.86□□□□□ -0.35
LGR5-203ENST00000540815 PLCD1P51178 756 aa12.86□□□□□ -0.35
LGR5-203ENST00000540815 PWP2Q15269 919 aaKnown RBP12.86□□□□□ -0.35
LGR5-203ENST00000540815 ZNF174Q15697 407 aa12.86□□□□□ -0.35
LGR5-203ENST00000540815 SKIDA1Q1XH10 827 aa12.86□□□□□ -0.35
LGR5-203ENST00000540815 SLC35G1Q2M3R5 365 aa12.86□□□□□ -0.35
LGR5-203ENST00000540815 ZNF444Q8N0Y2 327 aaPredicted RBP12.86□□□□□ -0.35
LGR5-203ENST00000540815 PDILTQ8N807 584 aa12.86□□□□□ -0.35
LGR5-203ENST00000540815 POLLQ9UGP5 575 aa12.86□□□□□ -0.35
LGR5-203ENST00000540815 KLRG2A4D1S0 409 aaPredicted RBP12.86□□□□□ -0.35
LGR5-203ENST00000540815 PLCG2P16885 1265 aa12.86□□□□□ -0.35
LGR5-203ENST00000540815 MAPKAPK5Q8IW41 473 aa12.86□□□□□ -0.35
LGR5-203ENST00000540815 SYMPKQ92797 1274 aaKnown RBP12.86□□□□□ -0.35
LGR5-203ENST00000540815 ZNF287Q9HBT7 754 aa12.86□□□□□ -0.35
LGR5-203ENST00000540815 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.86□□□□□ -0.35
LGR5-203ENST00000540815 MAD2L2Q9UI95 211 aa12.86□□□□□ -0.35
LGR5-203ENST00000540815 MYH1P12882 1939 aa12.86□□□□□ -0.35
LGR5-203ENST00000540815 A0A087X0B3 334 aa12.85□□□□□ -0.35
LGR5-203ENST00000540815 USP17L3A6NCW0 530 aa12.85□□□□□ -0.35
LGR5-203ENST00000540815 USP17L4A6NCW7 530 aa12.85□□□□□ -0.35
LGR5-203ENST00000540815 RASA1P20936 1047 aa12.85□□□□□ -0.35
LGR5-203ENST00000540815 UBASH3AP57075 661 aa12.85□□□□□ -0.35
LGR5-203ENST00000540815 ARHGAP29Q52LW3 1261 aa12.85□□□□□ -0.35
LGR5-203ENST00000540815 ARMCX5Q6P1M9 558 aa12.85□□□□□ -0.35
LGR5-203ENST00000540815 PIK3AP1Q6ZUJ8 805 aa12.85□□□□□ -0.35
LGR5-203ENST00000540815 USP17L1Q7RTZ2 530 aa12.85□□□□□ -0.35
LGR5-203ENST00000540815 SH3RF1Q7Z6J0 888 aa12.85□□□□□ -0.35
LGR5-203ENST00000540815 SLF2Q8IX21 1173 aa12.85□□□□□ -0.35
LGR5-203ENST00000540815 GRAMD1CQ8IYS0 662 aa12.85□□□□□ -0.35
LGR5-203ENST00000540815 FAM177A1Q8N128 213 aaPredicted RBP12.85□□□□□ -0.35
LGR5-203ENST00000540815 TBC1D16Q8TBP0 767 aa12.85□□□□□ -0.35
LGR5-203ENST00000540815 FAM163AQ96GL9 167 aaPredicted RBP12.85□□□□□ -0.35
LGR5-203ENST00000540815 EPSTI1Q96J88 318 aa12.85□□□□□ -0.35
LGR5-203ENST00000540815 FANCLQ9NW38 375 aa12.85□□□□□ -0.35
LGR5-203ENST00000540815 ANKRD31Q8N7Z5 1873 aa12.85□□□□□ -0.35
LGR5-203ENST00000540815 SERPINC1P01008 464 aa12.85□□□□□ -0.35
LGR5-203ENST00000540815 PTGDRQ13258 359 aa12.85□□□□□ -0.35
LGR5-203ENST00000540815 CT47A1Q5JQC4 288 aaPredicted RBP12.85□□□□□ -0.35
LGR5-203ENST00000540815 STAG2Q8N3U4 1231 aa12.85□□□□□ -0.35
LGR5-203ENST00000540815 ENOX1Q8TC92 643 aaKnown RBP12.85□□□□□ -0.35
LGR5-203ENST00000540815 TBC1D22AQ8WUA7 517 aa12.85□□□□□ -0.35
LGR5-203ENST00000540815 DHX58Q96C10 678 aa12.85□□□□□ -0.35
LGR5-203ENST00000540815 SAP30BPQ9UHR5 308 aaKnown RBP12.85□□□□□ -0.35
LGR5-203ENST00000540815 SNED1Q8TER0 1413 aa12.85□□□□□ -0.35
LGR5-203ENST00000540815 PNMA6AP0CW24 399 aaPredicted RBP12.84□□□□□ -0.35
LGR5-203ENST00000540815 C16orf86Q6ZW13 317 aa12.84□□□□□ -0.35
LGR5-203ENST00000540815 TMC4Q7Z404 712 aa12.84□□□□□ -0.35
LGR5-203ENST00000540815 TEX11Q8IYF3 940 aa12.84□□□□□ -0.35
LGR5-203ENST00000540815 BLIDQ8IZY5 108 aa12.84□□□□□ -0.35
LGR5-203ENST00000540815 FAM53CQ9NYF3 392 aa12.84□□□□□ -0.35
LGR5-203ENST00000540815 PCDHA4Q9UN74 947 aa12.84□□□□□ -0.35
LGR5-203ENST00000540815 GAKO14976 1311 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms