RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 FOXP1Q9H334 677 aaPredicted RBP28.31■■■□□ 2.12
TTC3-225ENST00000540756 RAD21O60216 631 aa28.3■■■□□ 2.12
TTC3-225ENST00000540756 XBP1P17861 261 aa28.3■■■□□ 2.12
TTC3-225ENST00000540756 LIG1P18858 919 aa28.3■■■□□ 2.12
TTC3-225ENST00000540756 ICA1Q05084 483 aa28.3■■■□□ 2.12
TTC3-225ENST00000540756 NOM1Q5C9Z4 860 aaKnown RBP28.3■■■□□ 2.12
TTC3-225ENST00000540756 TTBK2Q6IQ55 1244 aa28.3■■■□□ 2.12
TTC3-225ENST00000540756 LINC00301Q8NCQ3 95 aa28.3■■■□□ 2.12
TTC3-225ENST00000540756 GAS2L3Q86XJ1 694 aa28.3■■■□□ 2.12
TTC3-225ENST00000540756 SPZ1Q9BXG8 430 aa28.3■■■□□ 2.12
TTC3-225ENST00000540756 HACL1Q9UJ83 578 aa28.3■■■□□ 2.12
TTC3-225ENST00000540756 TOB1P50616 345 aaPredicted RBP28.29■■■□□ 2.12
TTC3-225ENST00000540756 ANO1Q5XXA6 986 aa28.29■■■□□ 2.12
TTC3-225ENST00000540756 WWC2Q6AWC2 1192 aa28.29■■■□□ 2.12
TTC3-225ENST00000540756 KCTD1Q719H9 257 aa28.29■■■□□ 2.12
TTC3-225ENST00000540756 HOMER1Q86YM7 354 aa28.29■■■□□ 2.12
TTC3-225ENST00000540756 TRPM4Q8TD43 1214 aa28.29■■■□□ 2.12
TTC3-225ENST00000540756 LZTS2Q9BRK4 669 aa28.29■■■□□ 2.12
TTC3-225ENST00000540756 POLR3EQ9NVU0 708 aa28.29■■■□□ 2.12
TTC3-225ENST00000540756 NYAP2Q9P242 653 aa28.29■■■□□ 2.12
TTC3-225ENST00000540756 MKL1Q969V6 931 aa28.28■■■□□ 2.12
TTC3-225ENST00000540756 TEPSINQ96N21 525 aa28.28■■■□□ 2.12
TTC3-225ENST00000540756 NASPP49321 788 aaPredicted RBP28.28■■■□□ 2.12
TTC3-225ENST00000540756 ZNF543Q08ER8 600 aa28.28■■■□□ 2.12
TTC3-225ENST00000540756 SF3A1Q15459 793 aaKnown RBP28.28■■■□□ 2.12
TTC3-225ENST00000540756 GOLGA6L4A6NEF3 574 aa28.27■■■□□ 2.12
TTC3-225ENST00000540756 KRT2P35908 639 aa28.27■■■□□ 2.12
TTC3-225ENST00000540756 MMP14P50281 582 aa28.27■■■□□ 2.12
TTC3-225ENST00000540756 PIGSQ96S52 555 aa28.27■■■□□ 2.12
TTC3-225ENST00000540756 CABP5Q9NP86 173 aa28.27■■■□□ 2.12
TTC3-225ENST00000540756 GPRC5DQ9NZD1 345 aa28.27■■■□□ 2.12
TTC3-225ENST00000540756 A0A1W2PRG0 241 aa28.26■■■□□ 2.12
TTC3-225ENST00000540756 EPS15P42566 896 aa28.26■■■□□ 2.12
TTC3-225ENST00000540756 ME1P48163 572 aa28.26■■■□□ 2.12
TTC3-225ENST00000540756 NLRP5P59047 1200 aa28.26■■■□□ 2.12
TTC3-225ENST00000540756 STK38Q15208 465 aa28.26■■■□□ 2.12
TTC3-225ENST00000540756 ASPRV1Q53RT3 343 aa28.26■■■□□ 2.12
TTC3-225ENST00000540756 HEATR3Q7Z4Q2 680 aa28.26■■■□□ 2.12
TTC3-225ENST00000540756 GPC2Q8N158 579 aa28.26■■■□□ 2.12
TTC3-225ENST00000540756 RNF181Q9P0P0 153 aa28.26■■■□□ 2.12
TTC3-225ENST00000540756 SYCE3A1L190 88 aa28.26■■■□□ 2.11
TTC3-225ENST00000540756 SLC16A2P36021 539 aa28.26■■■□□ 2.11
TTC3-225ENST00000540756 RIOX1Q9H6W3 641 aa28.26■■■□□ 2.11
TTC3-225ENST00000540756 PCDHA7Q9UN72 937 aa28.26■■■□□ 2.11
TTC3-225ENST00000540756 H7C1D1 291 aa28.25■■■□□ 2.11
TTC3-225ENST00000540756 DDNO94850 711 aaPredicted RBP28.25■■■□□ 2.11
TTC3-225ENST00000540756 CCDC96Q2M329 555 aa28.25■■■□□ 2.11
TTC3-225ENST00000540756 TBC1D12O60347 775 aa28.25■■■□□ 2.11
TTC3-225ENST00000540756 TNNI2P48788 182 aa28.25■■■□□ 2.11
TTC3-225ENST00000540756 BICD2Q8TD16 824 aa28.25■■■□□ 2.11
TTC3-225ENST00000540756 TNFRSF25Q93038 417 aa28.25■■■□□ 2.11
TTC3-225ENST00000540756 STXBP3O00186 592 aa28.24■■■□□ 2.11
TTC3-225ENST00000540756 ATP2B1P20020 1258 aa28.24■■■□□ 2.11
TTC3-225ENST00000540756 MARCKSP29966 332 aaPredicted RBP28.24■■■□□ 2.11
TTC3-225ENST00000540756 ECE1P42892 770 aa28.24■■■□□ 2.11
TTC3-225ENST00000540756 PTPAQ15257 358 aa28.24■■■□□ 2.11
TTC3-225ENST00000540756 DEFB129Q9H1M3 183 aa28.24■■■□□ 2.11
TTC3-225ENST00000540756 SPTLC2O15270 562 aa28.23■■■□□ 2.11
TTC3-225ENST00000540756 YEATS4O95619 227 aa28.23■■■□□ 2.11
TTC3-225ENST00000540756 HIRAP54198 1017 aaPredicted RBP28.23■■■□□ 2.11
TTC3-225ENST00000540756 SLFN13Q68D06 897 aa28.23■■■□□ 2.11
TTC3-225ENST00000540756 RRP36Q96EU6 259 aaKnown RBP28.23■■■□□ 2.11
TTC3-225ENST00000540756 NUP88Q99567 741 aaPredicted RBP28.23■■■□□ 2.11
TTC3-225ENST00000540756 BARHL2Q9NY43 387 aa28.23■■■□□ 2.11
TTC3-225ENST00000540756 ZBTB21Q9ULJ3 1066 aa28.23■■■□□ 2.11
TTC3-225ENST00000540756 ISY1Q9ULR0 285 aaKnown RBP28.23■■■□□ 2.11
TTC3-225ENST00000540756 SMARCA1P28370 1054 aa28.23■■■□□ 2.11
TTC3-225ENST00000540756 PPP4R3BQ5MIZ7 849 aa28.23■■■□□ 2.11
TTC3-225ENST00000540756 ANGEL2Q5VTE6 544 aaKnown RBP28.23■■■□□ 2.11
TTC3-225ENST00000540756 PRAMEF18Q5VWM3 479 aa28.23■■■□□ 2.11
TTC3-225ENST00000540756 CCDC84Q86UT8 332 aaPredicted RBP28.23■■■□□ 2.11
TTC3-225ENST00000540756 ACER1Q8TDN7 264 aa28.23■■■□□ 2.11
TTC3-225ENST00000540756 GOLPH3LQ9H4A5 285 aa28.23■■■□□ 2.11
TTC3-225ENST00000540756 F5H6K3 240 aa28.22■■■□□ 2.11
TTC3-225ENST00000540756 WNT7AO00755 349 aa28.22■■■□□ 2.11
TTC3-225ENST00000540756 MAP3K10Q02779 954 aa28.22■■■□□ 2.11
TTC3-225ENST00000540756 KLRC3Q07444 240 aa28.22■■■□□ 2.11
TTC3-225ENST00000540756 TNFAIP1Q13829 316 aa28.22■■■□□ 2.11
TTC3-225ENST00000540756 SLC39A14Q15043 492 aa28.22■■■□□ 2.11
TTC3-225ENST00000540756 ADGRF4Q8IZF3 695 aa28.22■■■□□ 2.11
TTC3-225ENST00000540756 RASGRP4Q8TDF6 673 aa28.22■■■□□ 2.11
TTC3-225ENST00000540756 PCDHB6Q9Y5E3 794 aa28.22■■■□□ 2.11
TTC3-225ENST00000540756 NR1I2O75469 434 aa28.21■■■□□ 2.11
TTC3-225ENST00000540756 SLC1A4P43007 532 aa28.21■■■□□ 2.11
TTC3-225ENST00000540756 ZNF445P59923 1031 aa28.21■■■□□ 2.11
TTC3-225ENST00000540756 JMJD4Q9H9V9 463 aa28.21■■■□□ 2.11
TTC3-225ENST00000540756 SH3GLB2Q9NR46 395 aa28.21■■■□□ 2.11
TTC3-225ENST00000540756 CAP2P40123 477 aa28.21■■■□□ 2.11
TTC3-225ENST00000540756 DACT1Q9NYF0 836 aa28.21■■■□□ 2.11
TTC3-225ENST00000540756 FSD2A1L4K1 749 aa28.2■■■□□ 2.11
TTC3-225ENST00000540756 PHF20L1A8MW92 1017 aa28.2■■■□□ 2.11
TTC3-225ENST00000540756 NDUFB10O96000 172 aa28.2■■■□□ 2.11
TTC3-225ENST00000540756 KIAA1755Q5JYT7 1200 aa28.2■■■□□ 2.11
TTC3-225ENST00000540756 NBPF12Q5TAG4 269 aaPredicted RBP28.2■■■□□ 2.11
TTC3-225ENST00000540756 C9orf131Q5VYM1 1079 aa28.2■■■□□ 2.11
TTC3-225ENST00000540756 CCAR1Q8IX12 1150 aaKnown RBP28.2■■■□□ 2.11
TTC3-225ENST00000540756 SPICE1Q8N0Z3 855 aa28.2■■■□□ 2.11
TTC3-225ENST00000540756 KCNG4Q8TDN1 519 aa28.2■■■□□ 2.11
TTC3-225ENST00000540756 BRMS1Q9HCU9 246 aa28.2■■■□□ 2.11
TTC3-225ENST00000540756 SEC63Q9UGP8 760 aaKnown RBP28.2■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms