RNA–Protein interactions for RNA: ENST00000540550.6

TSFM-207, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 2 BASIC

Gene TSFM, Length 1,935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-207ENST00000540550 C21orf2O43822 256 aa16.98■□□□□ 0.31
TSFM-207ENST00000540550 TPM3P06753 285 aa16.98■□□□□ 0.31
TSFM-207ENST00000540550 SMARCA1P28370 1054 aa16.98■□□□□ 0.31
TSFM-207ENST00000540550 SLC35G1Q2M3R5 365 aa16.98■□□□□ 0.31
TSFM-207ENST00000540550 LONRF3Q496Y0 759 aa16.98■□□□□ 0.31
TSFM-207ENST00000540550 NOM1Q5C9Z4 860 aaKnown RBP16.98■□□□□ 0.31
TSFM-207ENST00000540550 USP17L2Q6R6M4 530 aa16.98■□□□□ 0.31
TSFM-207ENST00000540550 AOPEPQ8N6M6 819 aa16.98■□□□□ 0.31
TSFM-207ENST00000540550 EHD4Q9H223 541 aa16.98■□□□□ 0.31
TSFM-207ENST00000540550 BARHL2Q9NY43 387 aa16.98■□□□□ 0.31
TSFM-207ENST00000540550 SERPINA10Q9UK55 444 aa16.98■□□□□ 0.31
TSFM-207ENST00000540550 GREB1LQ9C091 1923 aaPredicted RBP16.98■□□□□ 0.31
TSFM-207ENST00000540550 CCDC194A0A1B0GVG4 234 aa16.98■□□□□ 0.31
TSFM-207ENST00000540550 STXBP3O00186 592 aa16.98■□□□□ 0.31
TSFM-207ENST00000540550 SHMT1P34896 483 aa16.98■□□□□ 0.31
TSFM-207ENST00000540550 ZNF75DP51815 510 aa16.98■□□□□ 0.31
TSFM-207ENST00000540550 NFIAQ12857 509 aa16.98■□□□□ 0.31
TSFM-207ENST00000540550 PNOCQ13519 176 aa16.98■□□□□ 0.31
TSFM-207ENST00000540550 DPCR1Q3MIW9 517 aa16.98■□□□□ 0.31
TSFM-207ENST00000540550 PPP4R3BQ5MIZ7 849 aa16.98■□□□□ 0.31
TSFM-207ENST00000540550 DHX40Q8IX18 779 aaKnown RBP16.98■□□□□ 0.31
TSFM-207ENST00000540550 ELOA2Q8IYF1 753 aaPredicted RBP16.98■□□□□ 0.31
TSFM-207ENST00000540550 TTLL6Q8N841 843 aa16.98■□□□□ 0.31
TSFM-207ENST00000540550 DAGLBQ8NCG7 672 aa16.98■□□□□ 0.31
TSFM-207ENST00000540550 BPIFA3Q9BQP9 254 aa16.98■□□□□ 0.31
TSFM-207ENST00000540550 PDGFDQ9GZP0 370 aaPredicted RBP16.98■□□□□ 0.31
TSFM-207ENST00000540550 DHX36Q9H2U1 1008 aaKnown RBP16.98■□□□□ 0.31
TSFM-207ENST00000540550 TUBE1Q9UJT0 475 aa16.98■□□□□ 0.31
TSFM-207ENST00000540550 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.98■□□□□ 0.31
TSFM-207ENST00000540550 IGKV6D-41A0A0C4DH26 115 aa16.97■□□□□ 0.31
TSFM-207ENST00000540550 MPHOSPH10O00566 681 aaKnown RBP16.97■□□□□ 0.31
TSFM-207ENST00000540550 POLR2DO15514 142 aaKnown RBP16.97■□□□□ 0.31
TSFM-207ENST00000540550 TTLL1O95922 423 aa16.97■□□□□ 0.31
TSFM-207ENST00000540550 ASPRV1Q53RT3 343 aa16.97■□□□□ 0.31
TSFM-207ENST00000540550 CCDC93Q567U6 631 aa16.97■□□□□ 0.31
TSFM-207ENST00000540550 RASGRP2Q7LDG7 609 aa16.97■□□□□ 0.31
TSFM-207ENST00000540550 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.97■□□□□ 0.31
TSFM-207ENST00000540550 DRC7Q8IY82 874 aa16.97■□□□□ 0.31
TSFM-207ENST00000540550 SPC24Q8NBT2 197 aa16.97■□□□□ 0.31
TSFM-207ENST00000540550 CCDC34Q96HJ3 373 aa16.97■□□□□ 0.31
TSFM-207ENST00000540550 TRIM34Q9BYJ4 488 aa16.97■□□□□ 0.31
TSFM-207ENST00000540550 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.97■□□□□ 0.31
TSFM-207ENST00000540550 SIPA1L1O43166 1804 aa16.96■□□□□ 0.31
TSFM-207ENST00000540550 USP17L5A8MUK1 530 aa16.96■□□□□ 0.31
TSFM-207ENST00000540550 NAPAP54920 295 aa16.96■□□□□ 0.31
TSFM-207ENST00000540550 TPM4P67936 248 aa16.96■□□□□ 0.31
TSFM-207ENST00000540550 ATP2C1P98194 919 aaPredicted RBP16.96■□□□□ 0.31
TSFM-207ENST00000540550 KANK3Q6NY19 840 aa16.96■□□□□ 0.31
TSFM-207ENST00000540550 SARM1Q6SZW1 724 aa16.96■□□□□ 0.31
TSFM-207ENST00000540550 METTL16Q86W50 562 aaKnown RBP16.96■□□□□ 0.31
TSFM-207ENST00000540550 PLA2G4DQ86XP0 818 aa16.96■□□□□ 0.31
TSFM-207ENST00000540550 LRRC47Q8N1G4 583 aaKnown RBP16.96■□□□□ 0.31
TSFM-207ENST00000540550 PDHBP11177 359 aa16.96■□□□□ 0.3
TSFM-207ENST00000540550 CACNB3P54284 484 aa16.96■□□□□ 0.3
TSFM-207ENST00000540550 EIF6P56537 245 aaKnown RBP16.96■□□□□ 0.3
TSFM-207ENST00000540550 TCP10Q12799 353 aa16.96■□□□□ 0.3
TSFM-207ENST00000540550 PTGDRQ13258 359 aa16.96■□□□□ 0.3
TSFM-207ENST00000540550 SOGA3Q5TF21 947 aa16.96■□□□□ 0.3
TSFM-207ENST00000540550 HOMER1Q86YM7 354 aa16.96■□□□□ 0.3
TSFM-207ENST00000540550 ZSCAN29Q8IWY8 852 aaPredicted RBP16.96■□□□□ 0.3
TSFM-207ENST00000540550 RTKN2Q8IZC4 609 aa16.96■□□□□ 0.3
TSFM-207ENST00000540550 CCDC17Q96LX7 622 aa16.96■□□□□ 0.3
TSFM-207ENST00000540550 IDI2Q9BXS1 227 aa16.96■□□□□ 0.3
TSFM-207ENST00000540550 CLIP2Q9UDT6 1046 aa16.96■□□□□ 0.3
TSFM-207ENST00000540550 SERTAD1Q9UHV2 236 aa16.96■□□□□ 0.3
TSFM-207ENST00000540550 WNT7AO00755 349 aa16.95■□□□□ 0.3
TSFM-207ENST00000540550 MCM7P33993 719 aa16.95■□□□□ 0.3
TSFM-207ENST00000540550 TYW1BQ6NUM6 668 aa16.95■□□□□ 0.3
TSFM-207ENST00000540550 CPVLQ9H3G5 476 aa16.95■□□□□ 0.3
TSFM-207ENST00000540550 VAT1LQ9HCJ6 419 aa16.95■□□□□ 0.3
TSFM-207ENST00000540550 C6orf50Q9HD87 102 aa16.95■□□□□ 0.3
TSFM-207ENST00000540550 PCDHA6Q9UN73 950 aa16.95■□□□□ 0.3
TSFM-207ENST00000540550 PCDHA8Q9Y5H6 950 aa16.95■□□□□ 0.3
TSFM-207ENST00000540550 PCDHAC2Q9Y5I4 1007 aa16.95■□□□□ 0.3
TSFM-207ENST00000540550 FRMPD2Q68DX3 1309 aaPredicted RBP16.95■□□□□ 0.3
TSFM-207ENST00000540550 VWA3AA6NCI4 1184 aa16.94■□□□□ 0.3
TSFM-207ENST00000540550 SMTNL1A8MU46 457 aa16.94■□□□□ 0.3
TSFM-207ENST00000540550 ADAMTS3O15072 1205 aa16.94■□□□□ 0.3
TSFM-207ENST00000540550 NPM3O75607 178 aaKnown RBP16.94■□□□□ 0.3
TSFM-207ENST00000540550 POSTNQ15063 836 aa16.94■□□□□ 0.3
TSFM-207ENST00000540550 ZFPM1Q8IX07 1006 aa16.94■□□□□ 0.3
TSFM-207ENST00000540550 PDILTQ8N807 584 aa16.94■□□□□ 0.3
TSFM-207ENST00000540550 SLC16A10Q8TF71 515 aa16.94■□□□□ 0.3
TSFM-207ENST00000540550 PI4KBQ9UBF8 816 aa16.94■□□□□ 0.3
TSFM-207ENST00000540550 hCG_1984214I3L0E3 225 aa16.94■□□□□ 0.3
TSFM-207ENST00000540550 ZNF500O60304 480 aaPredicted RBP16.94■□□□□ 0.3
TSFM-207ENST00000540550 CDC25BP30305 580 aa16.94■□□□□ 0.3
TSFM-207ENST00000540550 ATP2B2Q01814 1243 aa16.94■□□□□ 0.3
TSFM-207ENST00000540550 ISM2Q6H9L7 571 aa16.94■□□□□ 0.3
TSFM-207ENST00000540550 CLEC10AQ8IUN9 316 aa16.94■□□□□ 0.3
TSFM-207ENST00000540550 ZNF713Q8N859 430 aaPredicted RBP16.94■□□□□ 0.3
TSFM-207ENST00000540550 RASGRP4Q8TDF6 673 aa16.94■□□□□ 0.3
TSFM-207ENST00000540550 SYMPKQ92797 1274 aaKnown RBP16.94■□□□□ 0.3
TSFM-207ENST00000540550 PIGSQ96S52 555 aa16.94■□□□□ 0.3
TSFM-207ENST00000540550 FAM198AQ9UFP1 575 aa16.94■□□□□ 0.3
TSFM-207ENST00000540550 M0R2N6 131 aa16.93■□□□□ 0.3
TSFM-207ENST00000540550 GNA11P29992 359 aa16.93■□□□□ 0.3
TSFM-207ENST00000540550 CFAP100Q494V2 611 aa16.93■□□□□ 0.3
TSFM-207ENST00000540550 USP49Q70CQ1 688 aa16.93■□□□□ 0.3
TSFM-207ENST00000540550 DHX58Q96C10 678 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms