RNA–Protein interactions for RNA: ENST00000540057.1

C2CD3-214, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 4

Gene C2CD3, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-214ENST00000540057 HHIPQ96QV1 700 aa5.42□□□□□ -1.54
C2CD3-214ENST00000540057 CARD11Q9BXL7 1154 aa5.42□□□□□ -1.54
C2CD3-214ENST00000540057 C1orf115Q9H7X2 142 aa5.42□□□□□ -1.54
C2CD3-214ENST00000540057 SH2B1Q9NRF2 756 aaPredicted RBP5.42□□□□□ -1.54
C2CD3-214ENST00000540057 BCORQ6W2J9 1755 aa5.42□□□□□ -1.54
C2CD3-214ENST00000540057 ST20-MTHFSA0A0A6YYL1 179 aa5.41□□□□□ -1.54
C2CD3-214ENST00000540057 DDX3YO15523 660 aaKnown RBP5.41□□□□□ -1.54
C2CD3-214ENST00000540057 PTPRAP18433 802 aa5.41□□□□□ -1.54
C2CD3-214ENST00000540057 IARSP41252 1262 aaKnown RBP5.41□□□□□ -1.54
C2CD3-214ENST00000540057 EIF1AXP47813 144 aaKnown RBP5.41□□□□□ -1.54
C2CD3-214ENST00000540057 MTHFSP49914 203 aa5.41□□□□□ -1.54
C2CD3-214ENST00000540057 DNM1Q05193 864 aaKnown RBP5.41□□□□□ -1.54
C2CD3-214ENST00000540057 NOGQ13253 232 aa5.41□□□□□ -1.54
C2CD3-214ENST00000540057 MTMR3Q13615 1198 aa5.41□□□□□ -1.54
C2CD3-214ENST00000540057 NOM1Q5C9Z4 860 aaKnown RBP5.41□□□□□ -1.54
C2CD3-214ENST00000540057 ZNF530Q6P9A1 599 aaPredicted RBP5.41□□□□□ -1.54
C2CD3-214ENST00000540057 OLFM4Q6UX06 510 aa5.41□□□□□ -1.54
C2CD3-214ENST00000540057 USP50Q70EL3 339 aaPredicted RBP5.41□□□□□ -1.54
C2CD3-214ENST00000540057 CTU1Q7Z7A3 348 aaKnown RBP5.41□□□□□ -1.54
C2CD3-214ENST00000540057 NCAPG2Q86XI2 1143 aa5.41□□□□□ -1.54
C2CD3-214ENST00000540057 UBASH3BQ8TF42 649 aa5.41□□□□□ -1.54
C2CD3-214ENST00000540057 GTF3C2Q8WUA4 911 aaPredicted RBP5.41□□□□□ -1.54
C2CD3-214ENST00000540057 TESK2Q96S53 571 aa5.41□□□□□ -1.54
C2CD3-214ENST00000540057 DZANK1Q9NVP4 752 aa5.41□□□□□ -1.54
C2CD3-214ENST00000540057 SAGE1Q9NXZ1 904 aa5.41□□□□□ -1.54
C2CD3-214ENST00000540057 SCN11AQ9UI33 1791 aa5.41□□□□□ -1.54
C2CD3-214ENST00000540057 AKAP11Q9UKA4 1901 aa5.4□□□□□ -1.54
C2CD3-214ENST00000540057 COL4A5P29400 1685 aa5.4□□□□□ -1.54
C2CD3-214ENST00000540057 KRTAP9-6A0A140TA67 174 aa5.4□□□□□ -1.54
C2CD3-214ENST00000540057 H3BRJ5 948 aa5.4□□□□□ -1.54
C2CD3-214ENST00000540057 TRPA1O75762 1119 aa5.4□□□□□ -1.54
C2CD3-214ENST00000540057 NPR3P17342 541 aa5.4□□□□□ -1.54
C2CD3-214ENST00000540057 CANXP27824 592 aaKnown RBP5.4□□□□□ -1.54
C2CD3-214ENST00000540057 MZF1P28698 734 aaPredicted RBP5.4□□□□□ -1.54
C2CD3-214ENST00000540057 EIF5P55010 431 aaKnown RBP5.4□□□□□ -1.54
C2CD3-214ENST00000540057 EIF4A2Q14240 407 aaKnown RBP5.4□□□□□ -1.54
C2CD3-214ENST00000540057 PLEKHO1Q53GL0 409 aaPredicted RBP5.4□□□□□ -1.54
C2CD3-214ENST00000540057 PHLDB3Q6NSJ2 640 aa5.4□□□□□ -1.54
C2CD3-214ENST00000540057 SYNE4Q8N205 404 aa5.4□□□□□ -1.54
C2CD3-214ENST00000540057 KLHL23Q8NBE8 558 aa5.4□□□□□ -1.54
C2CD3-214ENST00000540057 KLHDC7BQ96G42 594 aa5.4□□□□□ -1.54
C2CD3-214ENST00000540057 FAM46AQ96IP4 442 aaKnown RBP5.4□□□□□ -1.54
C2CD3-214ENST00000540057 GLIS2Q9BZE0 524 aaPredicted RBP5.4□□□□□ -1.54
C2CD3-214ENST00000540057 ZNF408Q9H9D4 720 aa5.4□□□□□ -1.54
C2CD3-214ENST00000540057 RNF186Q9NXI6 227 aa5.4□□□□□ -1.54
C2CD3-214ENST00000540057 SOX13Q9UN79 622 aa5.4□□□□□ -1.54
C2CD3-214ENST00000540057 RAXQ9Y2V3 346 aa5.4□□□□□ -1.54
C2CD3-214ENST00000540057 MKI67P46013 3256 aaKnown RBP5.4□□□□□ -1.55
C2CD3-214ENST00000540057 SCN7AQ01118 1682 aa5.4□□□□□ -1.55
C2CD3-214ENST00000540057 SNED1Q8TER0 1413 aa5.4□□□□□ -1.55
C2CD3-214ENST00000540057 FAM155AB1AL88 458 aaPredicted RBP5.39□□□□□ -1.55
C2CD3-214ENST00000540057 RPLP1P05386 114 aaKnown RBP5.39□□□□□ -1.55
C2CD3-214ENST00000540057 CES1P23141 567 aa5.39□□□□□ -1.55
C2CD3-214ENST00000540057 EIF6P56537 245 aaKnown RBP5.39□□□□□ -1.55
C2CD3-214ENST00000540057 KIF23Q02241 960 aaPredicted RBP5.39□□□□□ -1.55
C2CD3-214ENST00000540057 SLC39A6Q13433 755 aa5.39□□□□□ -1.55
C2CD3-214ENST00000540057 AMOTQ4VCS5 1084 aa5.39□□□□□ -1.55
C2CD3-214ENST00000540057 AKAP4Q5JQC9 854 aa5.39□□□□□ -1.55
C2CD3-214ENST00000540057 NBPF11Q86T75 865 aa5.39□□□□□ -1.55
C2CD3-214ENST00000540057 RTKN2Q8IZC4 609 aa5.39□□□□□ -1.55
C2CD3-214ENST00000540057 CNBD1Q8NA66 436 aa5.39□□□□□ -1.55
C2CD3-214ENST00000540057 JDP2Q8WYK2 163 aa5.39□□□□□ -1.55
C2CD3-214ENST00000540057 SIN3AQ96ST3 1273 aa5.39□□□□□ -1.55
C2CD3-214ENST00000540057 SEC31BQ9NQW1 1179 aa5.39□□□□□ -1.55
C2CD3-214ENST00000540057 POLKQ9UBT6 870 aa5.39□□□□□ -1.55
C2CD3-214ENST00000540057 EREGO14944 169 aa5.38□□□□□ -1.55
C2CD3-214ENST00000540057 NPHP1O15259 732 aa5.38□□□□□ -1.55
C2CD3-214ENST00000540057 NPR1P16066 1061 aa5.38□□□□□ -1.55
C2CD3-214ENST00000540057 HUNKP57058 714 aa5.38□□□□□ -1.55
C2CD3-214ENST00000540057 ST5P78524 1137 aa5.38□□□□□ -1.55
C2CD3-214ENST00000540057 PKN2Q16513 984 aaKnown RBP5.38□□□□□ -1.55
C2CD3-214ENST00000540057 DUOXA2Q1HG44 320 aa5.38□□□□□ -1.55
C2CD3-214ENST00000540057 UVSSAQ2YD98 709 aa5.38□□□□□ -1.55
C2CD3-214ENST00000540057 C8orf34Q49A92 452 aa5.38□□□□□ -1.55
C2CD3-214ENST00000540057 C1orf141Q5JVX7 400 aa5.38□□□□□ -1.55
C2CD3-214ENST00000540057 HGSNATQ68CP4 663 aa5.38□□□□□ -1.55
C2CD3-214ENST00000540057 SLC51AQ86UW1 340 aa5.38□□□□□ -1.55
C2CD3-214ENST00000540057 SLC17A8Q8NDX2 589 aa5.38□□□□□ -1.55
C2CD3-214ENST00000540057 WNT8BQ93098 351 aa5.38□□□□□ -1.55
C2CD3-214ENST00000540057 SETDB2Q96T68 719 aa5.38□□□□□ -1.55
C2CD3-214ENST00000540057 PSMD1Q99460 953 aa5.38□□□□□ -1.55
C2CD3-214ENST00000540057 CEP41Q9BYV8 373 aa5.38□□□□□ -1.55
C2CD3-214ENST00000540057 ADARB2Q9NS39 739 aaKnown RBP5.38□□□□□ -1.55
C2CD3-214ENST00000540057 PGAP2Q9UHJ9 254 aa5.38□□□□□ -1.55
C2CD3-214ENST00000540057 POLIQ9UNA4 740 aa5.38□□□□□ -1.55
C2CD3-214ENST00000540057 A0A087WZG4 1122 aa5.37□□□□□ -1.55
C2CD3-214ENST00000540057 KLRG2A4D1S0 409 aaPredicted RBP5.37□□□□□ -1.55
C2CD3-214ENST00000540057 CARNS1A5YM72 827 aa5.37□□□□□ -1.55
C2CD3-214ENST00000540057 PDE2AO00408 941 aaPredicted RBP5.37□□□□□ -1.55
C2CD3-214ENST00000540057 DHX15O43143 795 aaKnown RBP5.37□□□□□ -1.55
C2CD3-214ENST00000540057 FZD6O60353 706 aa5.37□□□□□ -1.55
C2CD3-214ENST00000540057 TNFRSF21O75509 655 aa5.37□□□□□ -1.55
C2CD3-214ENST00000540057 CD97P48960 835 aa5.37□□□□□ -1.55
C2CD3-214ENST00000540057 RGMBQ6NW40 437 aa5.37□□□□□ -1.55
C2CD3-214ENST00000540057 FAM117BQ6P1L5 589 aa5.37□□□□□ -1.55
C2CD3-214ENST00000540057 TMEM102Q8N9M5 508 aaPredicted RBP5.37□□□□□ -1.55
C2CD3-214ENST00000540057 MYRFLQ96LU7 910 aa5.37□□□□□ -1.55
C2CD3-214ENST00000540057 CSRNP1Q96S65 589 aa5.37□□□□□ -1.55
C2CD3-214ENST00000540057 ZKSCAN3Q9BRR0 538 aa5.37□□□□□ -1.55
C2CD3-214ENST00000540057 SLC52A2Q9HAB3 445 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms