RNA–Protein interactions for RNA: ENST00000539945.5

MDH1-215, Transcript of malate dehydrogenase 1, humanhuman

TSL 2 BASIC

Gene MDH1, Length 1,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-215ENST00000539945 SLC44A5Q8NCS7 719 aa11.22□□□□□ -0.61
MDH1-215ENST00000539945 NEDD1Q8NHV4 660 aa11.22□□□□□ -0.61
MDH1-215ENST00000539945 GPT2Q8TD30 523 aa11.22□□□□□ -0.61
MDH1-215ENST00000539945 NUP133Q8WUM0 1156 aa11.22□□□□□ -0.61
MDH1-215ENST00000539945 WASF1Q92558 559 aa11.22□□□□□ -0.61
MDH1-215ENST00000539945 PHKBQ93100 1093 aa11.22□□□□□ -0.61
MDH1-215ENST00000539945 MAP3K14Q99558 947 aa11.22□□□□□ -0.61
MDH1-215ENST00000539945 ALG1Q9BT22 464 aa11.22□□□□□ -0.61
MDH1-215ENST00000539945 IDI2Q9BXS1 227 aa11.22□□□□□ -0.61
MDH1-215ENST00000539945 SCAND2PQ9GZW5 306 aaPredicted RBP11.22□□□□□ -0.61
MDH1-215ENST00000539945 OSBPL5Q9H0X9 879 aaPredicted RBP11.22□□□□□ -0.61
MDH1-215ENST00000539945 GDPD2Q9HCC8 539 aa11.22□□□□□ -0.61
MDH1-215ENST00000539945 ZNRF3Q9ULT6 936 aa11.22□□□□□ -0.61
MDH1-215ENST00000539945 ELP1O95163 1332 aa11.22□□□□□ -0.61
MDH1-215ENST00000539945 FIBPO43427 364 aa11.21□□□□□ -0.61
MDH1-215ENST00000539945 RBM5P52756 815 aaKnown RBP eCLIP11.21□□□□□ -0.61
MDH1-215ENST00000539945 FUT2Q10981 343 aa11.21□□□□□ -0.61
MDH1-215ENST00000539945 FAM173BQ6P4H8 233 aa11.21□□□□□ -0.61
MDH1-215ENST00000539945 NIM1KQ8IY84 436 aa11.21□□□□□ -0.61
MDH1-215ENST00000539945 TRIM22Q8IYM9 498 aa11.21□□□□□ -0.61
MDH1-215ENST00000539945 GMLQ99445 158 aa11.21□□□□□ -0.61
MDH1-215ENST00000539945 SLC26A6Q9BXS9 759 aa11.21□□□□□ -0.61
MDH1-215ENST00000539945 RNF26Q9BY78 433 aaPredicted RBP11.21□□□□□ -0.61
MDH1-215ENST00000539945 GZF1Q9H116 711 aaPredicted RBP11.21□□□□□ -0.61
MDH1-215ENST00000539945 SWAP70Q9UH65 585 aa11.21□□□□□ -0.61
MDH1-215ENST00000539945 CFAP45Q9UL16 551 aa11.21□□□□□ -0.61
MDH1-215ENST00000539945 COL4A5P29400 1685 aa11.21□□□□□ -0.61
MDH1-215ENST00000539945 FER1L6Q2WGJ9 1857 aa11.21□□□□□ -0.62
MDH1-215ENST00000539945 PSMD14O00487 310 aa11.2□□□□□ -0.62
MDH1-215ENST00000539945 GADD45BO75293 160 aaPredicted RBP11.2□□□□□ -0.62
MDH1-215ENST00000539945 RAD17O75943 681 aa11.2□□□□□ -0.62
MDH1-215ENST00000539945 DEXIO95424 95 aa11.2□□□□□ -0.62
MDH1-215ENST00000539945 HLA-DOAP06340 250 aa11.2□□□□□ -0.62
MDH1-215ENST00000539945 NOVP48745 357 aa11.2□□□□□ -0.62
MDH1-215ENST00000539945 UBE2HP62256 183 aa11.2□□□□□ -0.62
MDH1-215ENST00000539945 GUCY1B3Q02153 619 aa11.2□□□□□ -0.62
MDH1-215ENST00000539945 NFIAQ12857 509 aa11.2□□□□□ -0.62
MDH1-215ENST00000539945 E2F4Q16254 413 aa11.2□□□□□ -0.62
MDH1-215ENST00000539945 ZNF598Q86UK7 904 aaKnown RBP11.2□□□□□ -0.62
MDH1-215ENST00000539945 ZNF396Q96N95 335 aaPredicted RBP11.2□□□□□ -0.62
MDH1-215ENST00000539945 EHD4Q9H223 541 aa11.2□□□□□ -0.62
MDH1-215ENST00000539945 TAOK3Q9H2K8 898 aa11.2□□□□□ -0.62
MDH1-215ENST00000539945 DHX36Q9H2U1 1008 aaKnown RBP11.2□□□□□ -0.62
MDH1-215ENST00000539945 KAT14Q9H8E8 782 aa11.2□□□□□ -0.62
MDH1-215ENST00000539945 SERPINB13Q9UIV8 391 aa11.2□□□□□ -0.62
MDH1-215ENST00000539945 ARIH1Q9Y4X5 557 aaPredicted RBP11.2□□□□□ -0.62
MDH1-215ENST00000539945 RNF223E7ERA6 249 aa11.19□□□□□ -0.62
MDH1-215ENST00000539945 PRPF3O43395 683 aaKnown RBP11.19□□□□□ -0.62
MDH1-215ENST00000539945 KIF5BP33176 963 aa11.19□□□□□ -0.62
MDH1-215ENST00000539945 TRIM29Q14134 588 aa11.19□□□□□ -0.62
MDH1-215ENST00000539945 CFAP100Q494V2 611 aa11.19□□□□□ -0.62
MDH1-215ENST00000539945 SPRYD7Q5W111 196 aa11.19□□□□□ -0.62
MDH1-215ENST00000539945 KRT40Q6A162 431 aa11.19□□□□□ -0.62
MDH1-215ENST00000539945 OTUD7BQ6GQQ9 843 aa11.19□□□□□ -0.62
MDH1-215ENST00000539945 TRIM67Q6ZTA4 783 aa11.19□□□□□ -0.62
MDH1-215ENST00000539945 TMTC3Q6ZXV5 915 aa11.19□□□□□ -0.62
MDH1-215ENST00000539945 BRAPQ7Z569 592 aa11.19□□□□□ -0.62
MDH1-215ENST00000539945 PNMA1Q8ND90 353 aa11.19□□□□□ -0.62
MDH1-215ENST00000539945 AGBL3Q8NEM8 1001 aa11.19□□□□□ -0.62
MDH1-215ENST00000539945 CTCFLQ8NI51 663 aaPredicted RBP11.19□□□□□ -0.62
MDH1-215ENST00000539945 LEO1Q8WVC0 666 aaPredicted RBP11.19□□□□□ -0.62
MDH1-215ENST00000539945 AIFM3Q96NN9 605 aa11.19□□□□□ -0.62
MDH1-215ENST00000539945 TFIP11Q9UBB9 837 aaKnown RBP11.19□□□□□ -0.62
MDH1-215ENST00000539945 PPP1R1BQ9UD71 204 aaPredicted RBP11.19□□□□□ -0.62
MDH1-215ENST00000539945 PCDHAC2Q9Y5I4 1007 aa11.19□□□□□ -0.62
MDH1-215ENST00000539945 LTBP3Q9NS15 1303 aa11.19□□□□□ -0.62
MDH1-215ENST00000539945 PLIN4Q96Q06 1357 aa11.19□□□□□ -0.62
MDH1-215ENST00000539945 ENTPD3O75355 529 aa11.18□□□□□ -0.62
MDH1-215ENST00000539945 KIF23Q02241 960 aaPredicted RBP11.18□□□□□ -0.62
MDH1-215ENST00000539945 CAVIN1Q6NZI2 390 aaKnown RBP11.18□□□□□ -0.62
MDH1-215ENST00000539945 OGFOD1Q8N543 542 aa11.18□□□□□ -0.62
MDH1-215ENST00000539945 ANKLE1Q8NAG6 615 aa11.18□□□□□ -0.62
MDH1-215ENST00000539945 SPATA32Q96LK8 384 aa11.18□□□□□ -0.62
MDH1-215ENST00000539945 CDHR5Q9HBB8 845 aa11.18□□□□□ -0.62
MDH1-215ENST00000539945 GJB4Q9NTQ9 266 aa11.18□□□□□ -0.62
MDH1-215ENST00000539945 HDAC9Q9UKV0 1011 aa11.18□□□□□ -0.62
MDH1-215ENST00000539945 COL2A1P02458 1487 aaPredicted RBP11.18□□□□□ -0.62
MDH1-215ENST00000539945 MYH15Q9Y2K3 1946 aa11.18□□□□□ -0.62
MDH1-215ENST00000539945 ATRNL1Q5VV63 1379 aa11.18□□□□□ -0.62
MDH1-215ENST00000539945 NFKBIEO00221 500 aa11.18□□□□□ -0.62
MDH1-215ENST00000539945 PLEKHA8P1O95397 391 aa11.18□□□□□ -0.62
MDH1-215ENST00000539945 U2AF2P26368 475 aaKnown RBP eCLIP11.18□□□□□ -0.622e-6■■■■■ 36.9
MDH1-215ENST00000539945 GUCY1A2P33402 732 aa11.18□□□□□ -0.62
MDH1-215ENST00000539945 SHMT1P34896 483 aa11.18□□□□□ -0.62
MDH1-215ENST00000539945 DEKP35659 375 aaKnown RBP11.18□□□□□ -0.62
MDH1-215ENST00000539945 GNAQP50148 359 aa11.18□□□□□ -0.62
MDH1-215ENST00000539945 MMP14P50281 582 aa11.18□□□□□ -0.62
MDH1-215ENST00000539945 AKAP17AQ02040 695 aaKnown RBP11.18□□□□□ -0.62
MDH1-215ENST00000539945 CXCL9Q07325 125 aa11.18□□□□□ -0.62
MDH1-215ENST00000539945 GRM4Q14833 912 aa11.18□□□□□ -0.62
MDH1-215ENST00000539945 FOXP4Q8IVH2 680 aaPredicted RBP11.18□□□□□ -0.62
MDH1-215ENST00000539945 ZFPM1Q8IX07 1006 aa11.18□□□□□ -0.62
MDH1-215ENST00000539945 CMTR1Q8N1G2 835 aaKnown RBP11.18□□□□□ -0.62
MDH1-215ENST00000539945 CCDC82Q8N4S0 544 aa11.18□□□□□ -0.62
MDH1-215ENST00000539945 MTMR14Q8NCE2 650 aa11.18□□□□□ -0.62
MDH1-215ENST00000539945 JDP2Q8WYK2 163 aa11.18□□□□□ -0.62
MDH1-215ENST00000539945 SYAP1Q96A49 352 aaPredicted RBP11.18□□□□□ -0.62
MDH1-215ENST00000539945 PRMT6Q96LA8 375 aaPredicted RBP11.18□□□□□ -0.62
MDH1-215ENST00000539945 CCDC17Q96LX7 622 aa11.18□□□□□ -0.62
MDH1-215ENST00000539945 TMEM47Q9BQJ4 181 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms