RNA–Protein interactions for RNA: ENST00000539782.1

LDHB-208, Transcript of lactate dehydrogenase B, humanhuman

TSL 3

Gene LDHB, Length 487 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-208ENST00000539782 RAG1P15918 1043 aa8.66□□□□□ -1.02
LDHB-208ENST00000539782 COPB2P35606 906 aa8.66□□□□□ -1.02
LDHB-208ENST00000539782 HNRNPUQ00839 825 aaKnown RBP eCLIP8.66□□□□□ -1.02
LDHB-208ENST00000539782 TLE2Q04725 743 aa8.66□□□□□ -1.02
LDHB-208ENST00000539782 SNX17Q15036 470 aa8.66□□□□□ -1.02
LDHB-208ENST00000539782 CLEC10AQ8IUN9 316 aa8.66□□□□□ -1.02
LDHB-208ENST00000539782 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.66□□□□□ -1.02
LDHB-208ENST00000539782 MYLIPQ8WY64 445 aa8.66□□□□□ -1.02
LDHB-208ENST00000539782 KIF1BPQ96EK5 621 aa8.66□□□□□ -1.02
LDHB-208ENST00000539782 CCDC17Q96LX7 622 aa8.66□□□□□ -1.02
LDHB-208ENST00000539782 SEMA6BQ9H3T3 888 aa8.66□□□□□ -1.02
LDHB-208ENST00000539782 GOPCQ9HD26 462 aa8.66□□□□□ -1.02
LDHB-208ENST00000539782 ATP8A2Q9NTI2 1148 aa8.66□□□□□ -1.02
LDHB-208ENST00000539782 TMX2Q9Y320 296 aa8.66□□□□□ -1.02
LDHB-208ENST00000539782 TACC3Q9Y6A5 838 aa8.66□□□□□ -1.02
LDHB-208ENST00000539782 A0A0C4DFX4 3053 aa8.66□□□□□ -1.02
LDHB-208ENST00000539782 TRIM43BA6NCK2 446 aa8.65□□□□□ -1.02
LDHB-208ENST00000539782 PGK2P07205 417 aa8.65□□□□□ -1.02
LDHB-208ENST00000539782 MS4A1P11836 297 aa8.65□□□□□ -1.02
LDHB-208ENST00000539782 RLBP1P12271 317 aa8.65□□□□□ -1.02
LDHB-208ENST00000539782 AKR1A1P14550 325 aa8.65□□□□□ -1.02
LDHB-208ENST00000539782 EVX2Q03828 476 aa8.65□□□□□ -1.02
LDHB-208ENST00000539782 FPGSQ05932 587 aa8.65□□□□□ -1.02
LDHB-208ENST00000539782 TMEM132BQ14DG7 1078 aa8.65□□□□□ -1.02
LDHB-208ENST00000539782 C1orf53Q5VUE5 145 aa8.65□□□□□ -1.02
LDHB-208ENST00000539782 SH3RF1Q7Z6J0 888 aa8.65□□□□□ -1.02
LDHB-208ENST00000539782 TRIM43Q96BQ3 446 aaPredicted RBP8.65□□□□□ -1.02
LDHB-208ENST00000539782 TINF2Q9BSI4 451 aa8.65□□□□□ -1.02
LDHB-208ENST00000539782 TMEM39AQ9NV64 488 aa8.65□□□□□ -1.02
LDHB-208ENST00000539782 PAG1Q9NWQ8 432 aa8.65□□□□□ -1.02
LDHB-208ENST00000539782 PHF24Q9UPV7 400 aa8.65□□□□□ -1.02
LDHB-208ENST00000539782 TMEM265A0A087WTH1 108 aa8.64□□□□□ -1.03
LDHB-208ENST00000539782 A0A1W2PQ45 241 aaPredicted RBP8.64□□□□□ -1.03
LDHB-208ENST00000539782 A0A1W2PQY0 241 aa8.64□□□□□ -1.03
LDHB-208ENST00000539782 TCRBV5S4A2TA0A5A2 114 aa8.64□□□□□ -1.03
LDHB-208ENST00000539782 DCDC2CA8MYV0 355 aa8.64□□□□□ -1.03
LDHB-208ENST00000539782 PRKAB2O43741 272 aa8.64□□□□□ -1.03
LDHB-208ENST00000539782 PGK1P00558 417 aa8.64□□□□□ -1.03
LDHB-208ENST00000539782 IGHA2P01877 340 aa8.64□□□□□ -1.03
LDHB-208ENST00000539782 EEF2P13639 858 aaKnown RBP8.64□□□□□ -1.03
LDHB-208ENST00000539782 STAT3P40763 770 aa8.64□□□□□ -1.03
LDHB-208ENST00000539782 SLC4A3P48751 1232 aa8.64□□□□□ -1.03
LDHB-208ENST00000539782 CDK8P49336 464 aa8.64□□□□□ -1.03
LDHB-208ENST00000539782 KIAA1755Q5JYT7 1200 aa8.64□□□□□ -1.03
LDHB-208ENST00000539782 FAM83BQ5T0W9 1011 aa8.64□□□□□ -1.03
LDHB-208ENST00000539782 ZSCAN25Q6NSZ9 544 aa8.64□□□□□ -1.03
LDHB-208ENST00000539782 CCDC174Q6PII3 467 aa8.64□□□□□ -1.03
LDHB-208ENST00000539782 RIOX2Q8IUF8 465 aa8.64□□□□□ -1.03
LDHB-208ENST00000539782 PANK1Q8TE04 598 aa8.64□□□□□ -1.03
LDHB-208ENST00000539782 NUP133Q8WUM0 1156 aa8.64□□□□□ -1.03
LDHB-208ENST00000539782 SYMPKQ92797 1274 aaKnown RBP8.64□□□□□ -1.03
LDHB-208ENST00000539782 DDX11Q96FC9 970 aa8.64□□□□□ -1.03
LDHB-208ENST00000539782 KANSL2Q9H9L4 492 aa8.64□□□□□ -1.03
LDHB-208ENST00000539782 STARD7Q9NQZ5 370 aa8.64□□□□□ -1.03
LDHB-208ENST00000539782 FBXO28Q9NVF7 368 aa8.64□□□□□ -1.03
LDHB-208ENST00000539782 ZHX1Q9UKY1 873 aaPredicted RBP8.64□□□□□ -1.03
LDHB-208ENST00000539782 PPP1R9AQ9ULJ8 1098 aa8.64□□□□□ -1.03
LDHB-208ENST00000539782 DIS3Q9Y2L1 958 aaKnown RBP8.64□□□□□ -1.03
LDHB-208ENST00000539782 SLC4A4Q9Y6R1 1079 aa8.64□□□□□ -1.03
LDHB-208ENST00000539782 RLFQ13129 1914 aa8.64□□□□□ -1.03
LDHB-208ENST00000539782 ROBO3Q96MS0 1386 aa8.63□□□□□ -1.03
LDHB-208ENST00000539782 DNAH12Q6ZR08 3092 aa8.63□□□□□ -1.03
LDHB-208ENST00000539782 MYH8P13535 1937 aa8.63□□□□□ -1.03
LDHB-208ENST00000539782 CYP2D7A0A087X1C5 515 aa8.63□□□□□ -1.03
LDHB-208ENST00000539782 USP17L12C9JPN9 530 aa8.63□□□□□ -1.03
LDHB-208ENST00000539782 USP17L21D6R901 530 aa8.63□□□□□ -1.03
LDHB-208ENST00000539782 VWA5AO00534 786 aa8.63□□□□□ -1.03
LDHB-208ENST00000539782 RAB11FIP3O75154 756 aa8.63□□□□□ -1.03
LDHB-208ENST00000539782 ADD2P35612 726 aa8.63□□□□□ -1.03
LDHB-208ENST00000539782 C12orf60Q5U649 245 aa8.63□□□□□ -1.03
LDHB-208ENST00000539782 SNRNP48Q6IEG0 339 aaKnown RBP8.63□□□□□ -1.03
LDHB-208ENST00000539782 C16orf86Q6ZW13 317 aa8.63□□□□□ -1.03
LDHB-208ENST00000539782 RPAP2Q8IXW5 612 aaPredicted RBP8.63□□□□□ -1.03
LDHB-208ENST00000539782 VTI1AQ96AJ9 217 aa8.63□□□□□ -1.03
LDHB-208ENST00000539782 SLF1Q9BQI6 1058 aa8.63□□□□□ -1.03
LDHB-208ENST00000539782 TEX13BQ9BXU2 312 aa8.63□□□□□ -1.03
LDHB-208ENST00000539782 TTYH1Q9H313 450 aaPredicted RBP8.63□□□□□ -1.03
LDHB-208ENST00000539782 BOLA2Q9H3K6 86 aa8.63□□□□□ -1.03
LDHB-208ENST00000539782 SPC25Q9HBM1 224 aa8.63□□□□□ -1.03
LDHB-208ENST00000539782 FAM184BQ9ULE4 1060 aa8.63□□□□□ -1.03
LDHB-208ENST00000539782 ISY1Q9ULR0 285 aaKnown RBP8.63□□□□□ -1.03
LDHB-208ENST00000539782 MROH7Q68CQ1 1323 aa8.62□□□□□ -1.03
LDHB-208ENST00000539782 ZBED9Q6R2W3 1325 aa8.62□□□□□ -1.03
LDHB-208ENST00000539782 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.62□□□□□ -1.03
LDHB-208ENST00000539782 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.62□□□□□ -1.03
LDHB-208ENST00000539782 MOXD2PA6NHM9 499 aa8.62□□□□□ -1.03
LDHB-208ENST00000539782 KIAA0355O15063 1070 aa8.62□□□□□ -1.03
LDHB-208ENST00000539782 ZBED4O75132 1171 aa8.62□□□□□ -1.03
LDHB-208ENST00000539782 TAL1P17542 331 aaPredicted RBP8.62□□□□□ -1.03
LDHB-208ENST00000539782 ACLYP53396 1101 aa8.62□□□□□ -1.03
LDHB-208ENST00000539782 ZNF792Q3KQV3 632 aa8.62□□□□□ -1.03
LDHB-208ENST00000539782 CCDC129Q6ZRS4 1044 aa8.62□□□□□ -1.03
LDHB-208ENST00000539782 MSL3Q8N5Y2 521 aaKnown RBP8.62□□□□□ -1.03
LDHB-208ENST00000539782 LENG1Q96BZ8 264 aaPredicted RBP8.62□□□□□ -1.03
LDHB-208ENST00000539782 GLT1D1Q96MS3 346 aa8.62□□□□□ -1.03
LDHB-208ENST00000539782 TOX2Q96NM4 488 aa8.62□□□□□ -1.03
LDHB-208ENST00000539782 TSEN34Q9BSV6 310 aaKnown RBP8.62□□□□□ -1.03
LDHB-208ENST00000539782 CHMP4BQ9H444 224 aaKnown RBP8.62□□□□□ -1.03
LDHB-208ENST00000539782 MKNK2Q9HBH9 465 aa8.62□□□□□ -1.03
LDHB-208ENST00000539782 ARPP21Q9UBL0 812 aaPredicted RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms