RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 RRP36Q96EU6 259 aaKnown RBP17.84■□□□□ 0.45
VAMP1-207ENST00000539047 GLIS2Q9BZE0 524 aaPredicted RBP17.84■□□□□ 0.45
VAMP1-207ENST00000539047 PHIPQ8WWQ0 1821 aa17.84■□□□□ 0.45
VAMP1-207ENST00000539047 F5H6K3 240 aa17.83■□□□□ 0.44
VAMP1-207ENST00000539047 PPFIA3O75145 1194 aa17.83■□□□□ 0.44
VAMP1-207ENST00000539047 BRD1O95696 1058 aa17.83■□□□□ 0.44
VAMP1-207ENST00000539047 FOSBP53539 338 aa17.83■□□□□ 0.44
VAMP1-207ENST00000539047 USP14P54578 494 aa17.83■□□□□ 0.44
VAMP1-207ENST00000539047 JAG1P78504 1218 aa17.83■□□□□ 0.44
VAMP1-207ENST00000539047 KLRC3Q07444 240 aa17.83■□□□□ 0.44
VAMP1-207ENST00000539047 GNL2Q13823 731 aaKnown RBP17.83■□□□□ 0.44
VAMP1-207ENST00000539047 SAFBQ15424 915 aaKnown RBP eCLIP17.83■□□□□ 0.44
VAMP1-207ENST00000539047 NBPF11Q86T75 865 aa17.83■□□□□ 0.44
VAMP1-207ENST00000539047 CMTR1Q8N1G2 835 aaKnown RBP17.83■□□□□ 0.44
VAMP1-207ENST00000539047 SRBD1Q8N5C6 995 aaKnown RBP17.83■□□□□ 0.44
VAMP1-207ENST00000539047 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.83■□□□□ 0.44
VAMP1-207ENST00000539047 RBM46Q8TBY0 533 aaKnown RBP17.83■□□□□ 0.44
VAMP1-207ENST00000539047 VCPKMTQ9H867 229 aa17.83■□□□□ 0.44
VAMP1-207ENST00000539047 GPCPD1Q9NPB8 672 aa17.83■□□□□ 0.44
VAMP1-207ENST00000539047 TRPM7Q96QT4 1865 aa17.82■□□□□ 0.44
VAMP1-207ENST00000539047 NDUFB10O96000 172 aa17.82■□□□□ 0.44
VAMP1-207ENST00000539047 GOLGA8HP0CJ92 632 aa17.82■□□□□ 0.44
VAMP1-207ENST00000539047 BMP3P12645 472 aa17.82■□□□□ 0.44
VAMP1-207ENST00000539047 APLP1P51693 650 aa17.82■□□□□ 0.44
VAMP1-207ENST00000539047 MAP3K9P80192 1104 aa17.82■□□□□ 0.44
VAMP1-207ENST00000539047 ANKRD13AQ8IZ07 590 aa17.82■□□□□ 0.44
VAMP1-207ENST00000539047 STAG2Q8N3U4 1231 aa17.82■□□□□ 0.44
VAMP1-207ENST00000539047 LPAR1Q92633 364 aa17.82■□□□□ 0.44
VAMP1-207ENST00000539047 BRMS1Q9HCU9 246 aa17.82■□□□□ 0.44
VAMP1-207ENST00000539047 USP17L10C9JJH3 530 aa17.81■□□□□ 0.44
VAMP1-207ENST00000539047 hCG_1984214I3L0E3 225 aa17.81■□□□□ 0.44
VAMP1-207ENST00000539047 USP2O75604 605 aaPredicted RBP17.81■□□□□ 0.44
VAMP1-207ENST00000539047 SCG2P13521 617 aa17.81■□□□□ 0.44
VAMP1-207ENST00000539047 FDPSP14324 419 aaKnown RBP17.81■□□□□ 0.44
VAMP1-207ENST00000539047 ECE1P42892 770 aa17.81■□□□□ 0.44
VAMP1-207ENST00000539047 ZYXQ15942 572 aaKnown RBP17.81■□□□□ 0.44
VAMP1-207ENST00000539047 FOXD4L5Q5VV16 416 aaPredicted RBP17.81■□□□□ 0.44
VAMP1-207ENST00000539047 MAP1SQ66K74 1059 aaPredicted RBP17.81■□□□□ 0.44
VAMP1-207ENST00000539047 FAM177A1Q8N128 213 aaPredicted RBP17.81■□□□□ 0.44
VAMP1-207ENST00000539047 ZNF713Q8N859 430 aaPredicted RBP17.81■□□□□ 0.44
VAMP1-207ENST00000539047 CCDC12Q8WUD4 166 aaPredicted RBP17.81■□□□□ 0.44
VAMP1-207ENST00000539047 FOXD4L4Q8WXT5 416 aaPredicted RBP17.81■□□□□ 0.44
VAMP1-207ENST00000539047 ZKSCAN4Q969J2 545 aaPredicted RBP17.81■□□□□ 0.44
VAMP1-207ENST00000539047 WDR18Q9BV38 432 aa17.81■□□□□ 0.44
VAMP1-207ENST00000539047 KIAA1683Q9H0B3 1180 aa17.81■□□□□ 0.44
VAMP1-207ENST00000539047 V9GY48 417 aaPredicted RBP17.81■□□□□ 0.44
VAMP1-207ENST00000539047 GOLGA6L22H0YM25 854 aa17.8■□□□□ 0.44
VAMP1-207ENST00000539047 DTNBO60941 627 aa17.8■□□□□ 0.44
VAMP1-207ENST00000539047 F13A1P00488 732 aa17.8■□□□□ 0.44
VAMP1-207ENST00000539047 PTPRAP18433 802 aa17.8■□□□□ 0.44
VAMP1-207ENST00000539047 FUT2Q10981 343 aa17.8■□□□□ 0.44
VAMP1-207ENST00000539047 PKP1Q13835 747 aa17.8■□□□□ 0.44
VAMP1-207ENST00000539047 MCTP1Q6DN14 999 aa17.8■□□□□ 0.44
VAMP1-207ENST00000539047 KCTD1Q719H9 257 aa17.8■□□□□ 0.44
VAMP1-207ENST00000539047 SIAH1Q8IUQ4 282 aa17.8■□□□□ 0.44
VAMP1-207ENST00000539047 ZNF280CQ8ND82 737 aa17.8■□□□□ 0.44
VAMP1-207ENST00000539047 CCDC148Q8NFR7 591 aa17.8■□□□□ 0.44
VAMP1-207ENST00000539047 ACER1Q8TDN7 264 aa17.8■□□□□ 0.44
VAMP1-207ENST00000539047 ZSCAN16Q9H4T2 348 aaPredicted RBP17.8■□□□□ 0.44
VAMP1-207ENST00000539047 ZNF408Q9H9D4 720 aa17.8■□□□□ 0.44
VAMP1-207ENST00000539047 MTMR6Q9Y217 621 aa17.8■□□□□ 0.44
VAMP1-207ENST00000539047 A0A1W2PRG0 241 aa17.79■□□□□ 0.44
VAMP1-207ENST00000539047 C19orf81C9J6K1 198 aa17.79■□□□□ 0.44
VAMP1-207ENST00000539047 WDR46O15213 610 aaKnown RBP17.79■□□□□ 0.44
VAMP1-207ENST00000539047 STAT2P52630 851 aa17.79■□□□□ 0.44
VAMP1-207ENST00000539047 FKBP1BP68106 108 aa17.79■□□□□ 0.44
VAMP1-207ENST00000539047 HTRA3P83110 453 aa17.79■□□□□ 0.44
VAMP1-207ENST00000539047 TRAF1Q13077 416 aa17.79■□□□□ 0.44
VAMP1-207ENST00000539047 VGLL4Q14135 290 aa17.79■□□□□ 0.44
VAMP1-207ENST00000539047 PFKFB3Q16875 520 aaPredicted RBP17.79■□□□□ 0.44
VAMP1-207ENST00000539047 FAM160B2Q86V87 743 aa17.79■□□□□ 0.44
VAMP1-207ENST00000539047 HOMER1Q86YM7 354 aa17.79■□□□□ 0.44
VAMP1-207ENST00000539047 FBXO18Q8NFZ0 1043 aa17.79■□□□□ 0.44
VAMP1-207ENST00000539047 CHURC1Q8WUH1 139 aa17.79■□□□□ 0.44
VAMP1-207ENST00000539047 TNPO1Q92973 898 aaKnown RBP17.79■□□□□ 0.44
VAMP1-207ENST00000539047 SH3GLB2Q9NR46 395 aa17.79■□□□□ 0.44
VAMP1-207ENST00000539047 TMOD4Q9NZQ9 345 aa17.79■□□□□ 0.44
VAMP1-207ENST00000539047 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.79■□□□□ 0.44
VAMP1-207ENST00000539047 UNCXA6NJT0 531 aa17.78■□□□□ 0.44
VAMP1-207ENST00000539047 CALML3P27482 149 aa17.78■□□□□ 0.44
VAMP1-207ENST00000539047 GUCY1B3Q02153 619 aa17.78■□□□□ 0.44
VAMP1-207ENST00000539047 MTMR2Q13614 643 aa17.78■□□□□ 0.44
VAMP1-207ENST00000539047 MAP3K11Q16584 847 aa17.78■□□□□ 0.44
VAMP1-207ENST00000539047 KRT40Q6A162 431 aa17.78■□□□□ 0.44
VAMP1-207ENST00000539047 CHADLQ6NUI6 762 aa17.78■□□□□ 0.44
VAMP1-207ENST00000539047 RASGRP2Q7LDG7 609 aa17.78■□□□□ 0.44
VAMP1-207ENST00000539047 HEATR3Q7Z4Q2 680 aa17.78■□□□□ 0.44
VAMP1-207ENST00000539047 SPICE1Q8N0Z3 855 aa17.78■□□□□ 0.44
VAMP1-207ENST00000539047 PIBF1Q8WXW3 757 aa17.78■□□□□ 0.44
VAMP1-207ENST00000539047 RIOX1Q9H6W3 641 aa17.78■□□□□ 0.44
VAMP1-207ENST00000539047 ZHX2Q9Y6X8 837 aa17.78■□□□□ 0.44
VAMP1-207ENST00000539047 PTPRFP10586 1907 aa17.78■□□□□ 0.44
VAMP1-207ENST00000539047 TRIM75PA6NK02 468 aa17.77■□□□□ 0.44
VAMP1-207ENST00000539047 TMEM232C9JQI7 657 aa17.77■□□□□ 0.44
VAMP1-207ENST00000539047 POTEIP0CG38 1075 aa17.77■□□□□ 0.44
VAMP1-207ENST00000539047 POTEJP0CG39 1038 aa17.77■□□□□ 0.44
VAMP1-207ENST00000539047 FSTL1Q12841 308 aa17.77■□□□□ 0.44
VAMP1-207ENST00000539047 SPP2Q13103 211 aa17.77■□□□□ 0.44
VAMP1-207ENST00000539047 FAM83BQ5T0W9 1011 aa17.77■□□□□ 0.44
VAMP1-207ENST00000539047 SYDE2Q5VT97 1194 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms