RNA–Protein interactions for RNA: ENST00000539041.5

SMPDL3A-203, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2 BASIC

Gene SMPDL3A, Length 1,755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-203ENST00000539041 DAGLBQ8NCG7 672 aa23.57■■□□□ 1.36
SMPDL3A-203ENST00000539041 ZDHHC15Q96MV8 337 aa23.57■■□□□ 1.36
SMPDL3A-203ENST00000539041 TTC12Q9H892 705 aaPredicted RBP23.57■■□□□ 1.36
SMPDL3A-203ENST00000539041 KCNQ5Q9NR82 932 aa23.57■■□□□ 1.36
SMPDL3A-203ENST00000539041 SERPINB13Q9UIV8 391 aa23.57■■□□□ 1.36
SMPDL3A-203ENST00000539041 POLR2DO15514 142 aaKnown RBP23.56■■□□□ 1.36
SMPDL3A-203ENST00000539041 HLA-DOAP06340 250 aa23.56■■□□□ 1.36
SMPDL3A-203ENST00000539041 GOLGA8HP0CJ92 632 aa23.56■■□□□ 1.36
SMPDL3A-203ENST00000539041 ATP2C1P98194 919 aaPredicted RBP23.56■■□□□ 1.36
SMPDL3A-203ENST00000539041 HDLBPQ00341 1268 aaKnown RBP23.56■■□□□ 1.36
SMPDL3A-203ENST00000539041 DACT2Q5SW24 774 aa23.56■■□□□ 1.36
SMPDL3A-203ENST00000539041 DRC7Q8IY82 874 aa23.56■■□□□ 1.36
SMPDL3A-203ENST00000539041 BARHL2Q9NY43 387 aa23.56■■□□□ 1.36
SMPDL3A-203ENST00000539041 SERTAD1Q9UHV2 236 aa23.56■■□□□ 1.36
SMPDL3A-203ENST00000539041 IGKV6D-41A0A0C4DH26 115 aa23.55■■□□□ 1.36
SMPDL3A-203ENST00000539041 STXBP3O00186 592 aa23.55■■□□□ 1.36
SMPDL3A-203ENST00000539041 AKR1B1P15121 316 aa23.55■■□□□ 1.36
SMPDL3A-203ENST00000539041 MDM2Q00987 491 aaPredicted RBP23.55■■□□□ 1.36
SMPDL3A-203ENST00000539041 CC2D2BQ6DHV5 1058 aa23.55■■□□□ 1.36
SMPDL3A-203ENST00000539041 RASGRP2Q7LDG7 609 aa23.55■■□□□ 1.36
SMPDL3A-203ENST00000539041 C7orf43Q8WVR3 580 aa23.55■■□□□ 1.36
SMPDL3A-203ENST00000539041 MTMR4Q9NYA4 1195 aa23.55■■□□□ 1.36
SMPDL3A-203ENST00000539041 ARFGEF1Q9Y6D6 1849 aa23.55■■□□□ 1.36
SMPDL3A-203ENST00000539041 ADAMTS3O15072 1205 aa23.55■■□□□ 1.36
SMPDL3A-203ENST00000539041 TYW1BQ6NUM6 668 aa23.55■■□□□ 1.36
SMPDL3A-203ENST00000539041 KANK3Q6NY19 840 aa23.55■■□□□ 1.36
SMPDL3A-203ENST00000539041 HEATR3Q7Z4Q2 680 aa23.55■■□□□ 1.36
SMPDL3A-203ENST00000539041 MRFAP1L1Q96HT8 127 aa23.55■■□□□ 1.36
SMPDL3A-203ENST00000539041 SMTNL1A8MU46 457 aa23.54■■□□□ 1.36
SMPDL3A-203ENST00000539041 M0R2N6 131 aa23.54■■□□□ 1.36
SMPDL3A-203ENST00000539041 PTGDRQ13258 359 aa23.54■■□□□ 1.36
SMPDL3A-203ENST00000539041 USP17L2Q6R6M4 530 aa23.54■■□□□ 1.36
SMPDL3A-203ENST00000539041 KIAA0825Q8IV33 1275 aa23.54■■□□□ 1.36
SMPDL3A-203ENST00000539041 SUPT20HQ8NEM7 779 aa23.54■■□□□ 1.36
SMPDL3A-203ENST00000539041 ACTN4O43707 911 aaKnown RBP23.53■■□□□ 1.36
SMPDL3A-203ENST00000539041 TPM4P67936 248 aa23.53■■□□□ 1.36
SMPDL3A-203ENST00000539041 POSTNQ15063 836 aa23.53■■□□□ 1.36
SMPDL3A-203ENST00000539041 USP49Q70CQ1 688 aa23.53■■□□□ 1.36
SMPDL3A-203ENST00000539041 PCDHA5Q9Y5H7 936 aa23.53■■□□□ 1.36
SMPDL3A-203ENST00000539041 KIF13BQ9NQT8 1826 aa23.53■■□□□ 1.36
SMPDL3A-203ENST00000539041 FOXN1O15353 648 aa23.52■■□□□ 1.36
SMPDL3A-203ENST00000539041 SHMT1P34896 483 aa23.52■■□□□ 1.36
SMPDL3A-203ENST00000539041 ISM2Q6H9L7 571 aa23.52■■□□□ 1.36
SMPDL3A-203ENST00000539041 CCDC12Q8WUD4 166 aaPredicted RBP23.52■■□□□ 1.36
SMPDL3A-203ENST00000539041 RRP36Q96EU6 259 aaKnown RBP23.52■■□□□ 1.36
SMPDL3A-203ENST00000539041 EHD4Q9H223 541 aa23.52■■□□□ 1.36
SMPDL3A-203ENST00000539041 CLIP2Q9UDT6 1046 aa23.52■■□□□ 1.36
SMPDL3A-203ENST00000539041 CCDC194A0A1B0GVG4 234 aa23.52■■□□□ 1.36
SMPDL3A-203ENST00000539041 USP17L5A8MUK1 530 aa23.52■■□□□ 1.36
SMPDL3A-203ENST00000539041 IKBKBO14920 756 aa23.52■■□□□ 1.36
SMPDL3A-203ENST00000539041 OFD1O75665 1012 aa23.52■■□□□ 1.36
SMPDL3A-203ENST00000539041 NFIAQ12857 509 aa23.52■■□□□ 1.36
SMPDL3A-203ENST00000539041 AOC3Q16853 763 aa23.52■■□□□ 1.36
SMPDL3A-203ENST00000539041 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.52■■□□□ 1.36
SMPDL3A-203ENST00000539041 FOXP4Q8IVH2 680 aaPredicted RBP23.52■■□□□ 1.36
SMPDL3A-203ENST00000539041 PDILTQ8N807 584 aa23.52■■□□□ 1.36
SMPDL3A-203ENST00000539041 CCDC34Q96HJ3 373 aa23.52■■□□□ 1.36
SMPDL3A-203ENST00000539041 CPVLQ9H3G5 476 aa23.52■■□□□ 1.36
SMPDL3A-203ENST00000539041 KCNF1Q9H3M0 494 aa23.52■■□□□ 1.36
SMPDL3A-203ENST00000539041 PCDHA6Q9UN73 950 aa23.52■■□□□ 1.36
SMPDL3A-203ENST00000539041 PCDHA8Q9Y5H6 950 aa23.52■■□□□ 1.36
SMPDL3A-203ENST00000539041 PDHBP11177 359 aa23.51■■□□□ 1.35
SMPDL3A-203ENST00000539041 ASPRV1Q53RT3 343 aa23.51■■□□□ 1.35
SMPDL3A-203ENST00000539041 SYMPKQ92797 1274 aaKnown RBP23.51■■□□□ 1.35
SMPDL3A-203ENST00000539041 SEC63Q9UGP8 760 aaKnown RBP23.51■■□□□ 1.35
SMPDL3A-203ENST00000539041 PRR29P0C7W0 189 aa23.5■■□□□ 1.35
SMPDL3A-203ENST00000539041 PTGS1P23219 599 aa23.5■■□□□ 1.35
SMPDL3A-203ENST00000539041 MCM7P33993 719 aa23.5■■□□□ 1.35
SMPDL3A-203ENST00000539041 RASGRP4Q8TDF6 673 aa23.5■■□□□ 1.35
SMPDL3A-203ENST00000539041 EPSTI1Q96J88 318 aa23.5■■□□□ 1.35
SMPDL3A-203ENST00000539041 VWA3AA6NCI4 1184 aa23.5■■□□□ 1.35
SMPDL3A-203ENST00000539041 TTLL1O95922 423 aa23.5■■□□□ 1.35
SMPDL3A-203ENST00000539041 RBM5P52756 815 aaKnown RBP eCLIP23.5■■□□□ 1.35
SMPDL3A-203ENST00000539041 NAPAP54920 295 aa23.5■■□□□ 1.35
SMPDL3A-203ENST00000539041 NCAPHQ15003 741 aa23.5■■□□□ 1.35
SMPDL3A-203ENST00000539041 NT5DC1Q5TFE4 455 aa23.5■■□□□ 1.35
SMPDL3A-203ENST00000539041 CCDC186Q7Z3E2 898 aa23.5■■□□□ 1.35
SMPDL3A-203ENST00000539041 LRRC47Q8N1G4 583 aaKnown RBP23.5■■□□□ 1.35
SMPDL3A-203ENST00000539041 SMARCE1Q969G3 411 aa23.5■■□□□ 1.35
SMPDL3A-203ENST00000539041 IDI2Q9BXS1 227 aa23.5■■□□□ 1.35
SMPDL3A-203ENST00000539041 ZMYND12Q9H0C1 365 aa23.5■■□□□ 1.35
SMPDL3A-203ENST00000539041 DHX36Q9H2U1 1008 aaKnown RBP23.5■■□□□ 1.35
SMPDL3A-203ENST00000539041 RIOX1Q9H6W3 641 aa23.5■■□□□ 1.35
SMPDL3A-203ENST00000539041 SERPINA10Q9UK55 444 aa23.5■■□□□ 1.35
SMPDL3A-203ENST00000539041 SNHG28P0DPA3 235 aa23.49■■□□□ 1.35
SMPDL3A-203ENST00000539041 ARL6IP4Q66PJ3 421 aaKnown RBP23.49■■□□□ 1.35
SMPDL3A-203ENST00000539041 HOMER1Q86YM7 354 aa23.49■■□□□ 1.35
SMPDL3A-203ENST00000539041 DHX58Q96C10 678 aa23.49■■□□□ 1.35
SMPDL3A-203ENST00000539041 MAN1B1Q9UKM7 699 aa23.49■■□□□ 1.35
SMPDL3A-203ENST00000539041 PCDHAC2Q9Y5I4 1007 aa23.49■■□□□ 1.35
SMPDL3A-203ENST00000539041 A0A087X0B3 334 aa23.48■■□□□ 1.35
SMPDL3A-203ENST00000539041 hCG_1984214I3L0E3 225 aa23.48■■□□□ 1.35
SMPDL3A-203ENST00000539041 SARSP49591 514 aaKnown RBP23.48■■□□□ 1.35
SMPDL3A-203ENST00000539041 PPP4R3BQ5MIZ7 849 aa23.48■■□□□ 1.35
SMPDL3A-203ENST00000539041 ZNF713Q8N859 430 aaPredicted RBP23.48■■□□□ 1.35
SMPDL3A-203ENST00000539041 TRIML1Q8N9V2 468 aa23.48■■□□□ 1.35
SMPDL3A-203ENST00000539041 CCDC17Q96LX7 622 aa23.48■■□□□ 1.35
SMPDL3A-203ENST00000539041 PIGSQ96S52 555 aa23.48■■□□□ 1.35
SMPDL3A-203ENST00000539041 NPM3O75607 178 aaKnown RBP23.47■■□□□ 1.35
SMPDL3A-203ENST00000539041 ZFPM1Q8IX07 1006 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms