RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 TTLL7Q6ZT98 887 aa20.87■□□□□ 0.93
SFSWAP-207ENST00000538548 CRACR2BQ8N4Y2 399 aaPredicted RBP20.87■□□□□ 0.93
SFSWAP-207ENST00000538548 RUBCNQ92622 972 aa20.87■□□□□ 0.93
SFSWAP-207ENST00000538548 EHD4Q9H223 541 aa20.87■□□□□ 0.93
SFSWAP-207ENST00000538548 LUC7L2Q9Y383 392 aaKnown RBP20.87■□□□□ 0.93
SFSWAP-207ENST00000538548 NUP188Q5SRE5 1749 aa20.86■□□□□ 0.93
SFSWAP-207ENST00000538548 NBPF26B4DH59 902 aa20.86■□□□□ 0.93
SFSWAP-207ENST00000538548 NBPF10Q6P3W6 841 aaKnown RBP20.86■□□□□ 0.93
SFSWAP-207ENST00000538548 NBPF15Q8N660 670 aa20.86■□□□□ 0.93
SFSWAP-207ENST00000538548 PRPF38AQ8NAV1 312 aaKnown RBP20.86■□□□□ 0.93
SFSWAP-207ENST00000538548 PKD1L3Q7Z443 1732 aa20.86■□□□□ 0.93
SFSWAP-207ENST00000538548 CCDC196A0A1B0GTZ2 297 aa20.86■□□□□ 0.93
SFSWAP-207ENST00000538548 OPA1O60313 960 aa20.86■□□□□ 0.93
SFSWAP-207ENST00000538548 COBLO75128 1261 aa20.86■□□□□ 0.93
SFSWAP-207ENST00000538548 ALX1Q15699 326 aa20.86■□□□□ 0.93
SFSWAP-207ENST00000538548 TSR1Q2NL82 804 aaKnown RBP20.86■□□□□ 0.93
SFSWAP-207ENST00000538548 DCAF5Q96JK2 942 aa20.86■□□□□ 0.93
SFSWAP-207ENST00000538548 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.86■□□□□ 0.938e-7■■■□□ 16.8
SFSWAP-207ENST00000538548 XIRP1Q702N8 1843 aaKnown RBP20.86■□□□□ 0.93
SFSWAP-207ENST00000538548 PDE2AO00408 941 aaPredicted RBP20.85■□□□□ 0.93
SFSWAP-207ENST00000538548 BMP15O95972 392 aa20.85■□□□□ 0.93
SFSWAP-207ENST00000538548 TATP17735 454 aaPredicted RBP20.85■□□□□ 0.93
SFSWAP-207ENST00000538548 KIAA1328Q86T90 577 aa20.85■□□□□ 0.93
SFSWAP-207ENST00000538548 CNNM2Q9H8M5 875 aa20.85■□□□□ 0.93
SFSWAP-207ENST00000538548 INCENPQ9NQS7 918 aa20.85■□□□□ 0.93
SFSWAP-207ENST00000538548 GNL3LQ9NVN8 582 aaKnown RBP20.85■□□□□ 0.93
SFSWAP-207ENST00000538548 IQSEC3Q9UPP2 1182 aaPredicted RBP20.85■□□□□ 0.93
SFSWAP-207ENST00000538548 EPB41P11171 864 aaKnown RBP20.85■□□□□ 0.93
SFSWAP-207ENST00000538548 AKAP11Q9UKA4 1901 aa20.85■□□□□ 0.93
SFSWAP-207ENST00000538548 ATP6V1AP38606 617 aa20.84■□□□□ 0.93
SFSWAP-207ENST00000538548 PSEN1P49768 467 aa20.84■□□□□ 0.93
SFSWAP-207ENST00000538548 SKOR1P84550 965 aa20.84■□□□□ 0.93
SFSWAP-207ENST00000538548 B4GALNT4Q76KP1 1039 aa20.84■□□□□ 0.93
SFSWAP-207ENST00000538548 SND1Q7KZF4 910 aaKnown RBP eCLIP20.84■□□□□ 0.93
SFSWAP-207ENST00000538548 ANKRD18AQ8IVF6 992 aa20.84■□□□□ 0.93
SFSWAP-207ENST00000538548 SPATA31A3Q5VYP0 1347 aa20.84■□□□□ 0.93
SFSWAP-207ENST00000538548 GLI3P10071 1580 aa20.84■□□□□ 0.93
SFSWAP-207ENST00000538548 A0A1W2PQC6 194 aa20.84■□□□□ 0.93
SFSWAP-207ENST00000538548 WDR59Q6PJI9 974 aa20.84■□□□□ 0.93
SFSWAP-207ENST00000538548 RPAINQ86UA6 219 aa20.84■□□□□ 0.93
SFSWAP-207ENST00000538548 CCDC82Q8N4S0 544 aa20.84■□□□□ 0.93
SFSWAP-207ENST00000538548 NELFBQ8WX92 580 aa20.84■□□□□ 0.93
SFSWAP-207ENST00000538548 XDHP47989 1333 aa20.84■□□□□ 0.93
SFSWAP-207ENST00000538548 ZNF532Q9HCE3 1301 aa20.84■□□□□ 0.93
SFSWAP-207ENST00000538548 SPATS2Q86XZ4 545 aaKnown RBP20.83■□□□□ 0.93
SFSWAP-207ENST00000538548 MMGT1Q8N4V1 131 aa20.83■□□□□ 0.93
SFSWAP-207ENST00000538548 KRT23Q9C075 422 aa20.83■□□□□ 0.93
SFSWAP-207ENST00000538548 CAPN11Q9UMQ6 739 aa20.83■□□□□ 0.93
SFSWAP-207ENST00000538548 TFR2Q9UP52 801 aa20.83■□□□□ 0.93
SFSWAP-207ENST00000538548 ZNF185O15231 689 aa20.83■□□□□ 0.92
SFSWAP-207ENST00000538548 IDH1O75874 414 aaKnown RBP20.83■□□□□ 0.92
SFSWAP-207ENST00000538548 SETQ01105 290 aaPredicted RBP20.83■□□□□ 0.92
SFSWAP-207ENST00000538548 C2orf54Q08AI8 447 aa20.83■□□□□ 0.92
SFSWAP-207ENST00000538548 FNBP4Q8N3X1 1017 aaPredicted RBP20.83■□□□□ 0.92
SFSWAP-207ENST00000538548 STRBPQ96SI9 672 aaKnown RBP20.83■□□□□ 0.92
SFSWAP-207ENST00000538548 IDEP14735 1019 aa20.82■□□□□ 0.92
SFSWAP-207ENST00000538548 RCAN1P53805 252 aa20.82■□□□□ 0.92
SFSWAP-207ENST00000538548 ITIH3Q06033 890 aa20.82■□□□□ 0.92
SFSWAP-207ENST00000538548 MEA1Q16626 185 aa20.82■□□□□ 0.92
SFSWAP-207ENST00000538548 MB21D1Q8N884 522 aa20.82■□□□□ 0.92
SFSWAP-207ENST00000538548 ZNF512BQ96KM6 892 aaPredicted RBP20.82■□□□□ 0.92
SFSWAP-207ENST00000538548 RABEP2Q9H5N1 569 aa20.82■□□□□ 0.92
SFSWAP-207ENST00000538548 A1CFQ9NQ94 594 aaKnown RBP20.82■□□□□ 0.92
SFSWAP-207ENST00000538548 FAM205CA6NFA0 338 aa20.82■□□□□ 0.92
SFSWAP-207ENST00000538548 CCDC172P0C7W6 258 aa20.82■□□□□ 0.92
SFSWAP-207ENST00000538548 CYLC1P35663 651 aaPredicted RBP20.82■□□□□ 0.92
SFSWAP-207ENST00000538548 STAMQ92783 540 aa20.82■□□□□ 0.92
SFSWAP-207ENST00000538548 AIDAQ96BJ3 306 aa20.82■□□□□ 0.92
SFSWAP-207ENST00000538548 CABS1Q96KC9 395 aa20.82■□□□□ 0.92
SFSWAP-207ENST00000538548 BLZF1Q9H2G9 400 aa20.82■□□□□ 0.92
SFSWAP-207ENST00000538548 JADE2Q9NQC1 790 aa20.82■□□□□ 0.92
SFSWAP-207ENST00000538548 PIH1D3Q9NQM4 214 aaKnown RBP20.82■□□□□ 0.92
SFSWAP-207ENST00000538548 CHD4Q14839 1912 aa20.82■□□□□ 0.92
SFSWAP-207ENST00000538548 LGALS16A8MUM7 142 aa20.81■□□□□ 0.92
SFSWAP-207ENST00000538548 IPO7O95373 1038 aaKnown RBP20.81■□□□□ 0.92
SFSWAP-207ENST00000538548 PDE6AP16499 860 aa20.81■□□□□ 0.92
SFSWAP-207ENST00000538548 CTDSPL2Q05D32 466 aa20.81■□□□□ 0.92
SFSWAP-207ENST00000538548 WTAPQ15007 396 aa20.81■□□□□ 0.92
SFSWAP-207ENST00000538548 AKNAD1Q5T1N1 836 aa20.81■□□□□ 0.92
SFSWAP-207ENST00000538548 ZNF658Q5TYW1 1059 aaPredicted RBP20.81■□□□□ 0.92
SFSWAP-207ENST00000538548 ALS2CLQ60I27 953 aa20.81■□□□□ 0.92
SFSWAP-207ENST00000538548 CMTR1Q8N1G2 835 aaKnown RBP20.81■□□□□ 0.92
SFSWAP-207ENST00000538548 PURBQ96QR8 312 aaKnown RBP20.81■□□□□ 0.92
SFSWAP-207ENST00000538548 LACRTQ9GZZ8 138 aa20.81■□□□□ 0.92
SFSWAP-207ENST00000538548 ZBTB3Q9H5J0 574 aa20.81■□□□□ 0.92
SFSWAP-207ENST00000538548 SAMM50Q9Y512 469 aa20.81■□□□□ 0.92
SFSWAP-207ENST00000538548 CAPN7Q9Y6W3 813 aa20.81■□□□□ 0.92
SFSWAP-207ENST00000538548 H7C1D1 291 aa20.81■□□□□ 0.92
SFSWAP-207ENST00000538548 NDUFAB1O14561 156 aa20.81■□□□□ 0.92
SFSWAP-207ENST00000538548 FSBPO95073 299 aa20.81■□□□□ 0.92
SFSWAP-207ENST00000538548 NAPBQ9H115 298 aa20.81■□□□□ 0.92
SFSWAP-207ENST00000538548 TNS3Q68CZ2 1445 aa20.8■□□□□ 0.92
SFSWAP-207ENST00000538548 GTPBP6O43824 516 aaPredicted RBP20.8■□□□□ 0.92
SFSWAP-207ENST00000538548 KIAA0754O94854 1291 aa20.8■□□□□ 0.92
SFSWAP-207ENST00000538548 XBP1P17861 261 aa20.8■□□□□ 0.92
SFSWAP-207ENST00000538548 ZNF572Q7Z3I7 529 aaPredicted RBP20.8■□□□□ 0.92
SFSWAP-207ENST00000538548 RRP36Q96EU6 259 aaKnown RBP20.8■□□□□ 0.92
SFSWAP-207ENST00000538548 PYM1Q9BRP8 204 aaKnown RBP20.8■□□□□ 0.92
SFSWAP-207ENST00000538548 RMND1Q9NWS8 449 aa20.8■□□□□ 0.92
SFSWAP-207ENST00000538548 VPS54Q9P1Q0 977 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms