RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 PFKFB2O60825 505 aa7.62□□□□□ -1.19
USP28-207ENST00000538475 CUTAO60888 179 aa7.62□□□□□ -1.19
USP28-207ENST00000538475 SURF6O75683 361 aaKnown RBP7.62□□□□□ -1.19
USP28-207ENST00000538475 ALDH1L1O75891 902 aa7.62□□□□□ -1.19
USP28-207ENST00000538475 SEC31AO94979 1220 aaKnown RBP7.62□□□□□ -1.19
USP28-207ENST00000538475 SLC3A2P08195 630 aaKnown RBP7.62□□□□□ -1.19
USP28-207ENST00000538475 TOP1P11387 765 aaKnown RBP7.62□□□□□ -1.19
USP28-207ENST00000538475 GNG11P61952 73 aa7.62□□□□□ -1.19
USP28-207ENST00000538475 MYL5Q02045 173 aa7.62□□□□□ -1.19
USP28-207ENST00000538475 MAP3K10Q02779 954 aa7.62□□□□□ -1.19
USP28-207ENST00000538475 DRP2Q13474 957 aa7.62□□□□□ -1.19
USP28-207ENST00000538475 NCAPHQ15003 741 aa7.62□□□□□ -1.19
USP28-207ENST00000538475 PLCB4Q15147 1175 aa7.62□□□□□ -1.19
USP28-207ENST00000538475 TBCELQ5QJ74 424 aa7.62□□□□□ -1.19
USP28-207ENST00000538475 NUTM2GQ5VZR2 741 aa7.62□□□□□ -1.19
USP28-207ENST00000538475 CWC27Q6UX04 472 aaKnown RBP7.62□□□□□ -1.19
USP28-207ENST00000538475 BICDL1Q6ZP65 573 aa7.62□□□□□ -1.19
USP28-207ENST00000538475 BRAPQ7Z569 592 aa7.62□□□□□ -1.19
USP28-207ENST00000538475 YTHDF3Q7Z739 585 aaKnown RBP7.62□□□□□ -1.19
USP28-207ENST00000538475 FERMT3Q86UX7 667 aa7.62□□□□□ -1.19
USP28-207ENST00000538475 ARHGEF25Q86VW2 580 aa7.62□□□□□ -1.19
USP28-207ENST00000538475 SLC9A9Q8IVB4 645 aa7.62□□□□□ -1.19
USP28-207ENST00000538475 CCDC50Q8IVM0 306 aa7.62□□□□□ -1.19
USP28-207ENST00000538475 CNPY4Q8N129 248 aa7.62□□□□□ -1.19
USP28-207ENST00000538475 FSIP1Q8NA03 581 aa7.62□□□□□ -1.19
USP28-207ENST00000538475 AFAP1L1Q8TED9 768 aa7.62□□□□□ -1.19
USP28-207ENST00000538475 ANKRD24Q8TF21 1146 aa7.62□□□□□ -1.19
USP28-207ENST00000538475 TBC1D22AQ8WUA7 517 aa7.62□□□□□ -1.19
USP28-207ENST00000538475 BRF1Q92994 677 aa7.62□□□□□ -1.19
USP28-207ENST00000538475 DRC1Q96MC2 740 aa7.62□□□□□ -1.19
USP28-207ENST00000538475 PANX2Q96RD6 677 aa7.62□□□□□ -1.19
USP28-207ENST00000538475 PAGR1Q9BTK6 254 aa7.62□□□□□ -1.19
USP28-207ENST00000538475 CFHR5Q9BXR6 569 aa7.62□□□□□ -1.19
USP28-207ENST00000538475 USP44Q9H0E7 712 aa7.62□□□□□ -1.19
USP28-207ENST00000538475 IL25Q9H293 177 aa7.62□□□□□ -1.19
USP28-207ENST00000538475 CRISPLD1Q9H336 500 aa7.62□□□□□ -1.19
USP28-207ENST00000538475 VRTNQ9H8Y1 702 aa7.62□□□□□ -1.19
USP28-207ENST00000538475 ZCCHC17Q9NP64 241 aaKnown RBP7.62□□□□□ -1.19
USP28-207ENST00000538475 TUBE1Q9UJT0 475 aa7.62□□□□□ -1.19
USP28-207ENST00000538475 USP54Q70EL1 1684 aa7.62□□□□□ -1.19
USP28-207ENST00000538475 TOPAZ1Q8N9V7 1692 aa7.62□□□□□ -1.19
USP28-207ENST00000538475 PARP4Q9UKK3 1724 aaKnown RBP7.61□□□□□ -1.19
USP28-207ENST00000538475 KDRP35968 1356 aa7.61□□□□□ -1.19
USP28-207ENST00000538475 SFI1A8K8P3 1242 aa7.61□□□□□ -1.19
USP28-207ENST00000538475 CCDC175P0C221 793 aa7.61□□□□□ -1.19
USP28-207ENST00000538475 CMA1P23946 247 aa7.61□□□□□ -1.19
USP28-207ENST00000538475 TDO2P48775 406 aa7.61□□□□□ -1.19
USP28-207ENST00000538475 UBASH3AP57075 661 aa7.61□□□□□ -1.19
USP28-207ENST00000538475 PTH1RQ03431 593 aa7.61□□□□□ -1.19
USP28-207ENST00000538475 GNL2Q13823 731 aaKnown RBP7.61□□□□□ -1.19
USP28-207ENST00000538475 TOB2Q14106 344 aaPredicted RBP7.61□□□□□ -1.19
USP28-207ENST00000538475 CASP8Q14790 479 aa7.61□□□□□ -1.19
USP28-207ENST00000538475 ADCK5Q3MIX3 580 aa7.61□□□□□ -1.19
USP28-207ENST00000538475 ZNF385CQ66K41 422 aaPredicted RBP7.61□□□□□ -1.19
USP28-207ENST00000538475 FIGNL1Q6PIW4 674 aa7.61□□□□□ -1.19
USP28-207ENST00000538475 SLC4A10Q6U841 1118 aa7.61□□□□□ -1.19
USP28-207ENST00000538475 MICALCLQ6ZW33 695 aa7.61□□□□□ -1.19
USP28-207ENST00000538475 TAX1BP1Q86VP1 789 aa7.61□□□□□ -1.19
USP28-207ENST00000538475 CERS3Q8IU89 383 aa7.61□□□□□ -1.19
USP28-207ENST00000538475 AMOTL1Q8IY63 956 aa7.61□□□□□ -1.19
USP28-207ENST00000538475 SIX5Q8N196 739 aa7.61□□□□□ -1.19
USP28-207ENST00000538475 NECAB1Q8N987 351 aa7.61□□□□□ -1.19
USP28-207ENST00000538475 MAGEC3Q8TD91 643 aa7.61□□□□□ -1.19
USP28-207ENST00000538475 BAG1Q99933 345 aaPredicted RBP7.61□□□□□ -1.19
USP28-207ENST00000538475 AGXT2Q9BYV1 514 aa7.61□□□□□ -1.19
USP28-207ENST00000538475 PDE11AQ9HCR9 933 aa7.61□□□□□ -1.19
USP28-207ENST00000538475 ZDHHC3Q9NYG2 299 aa7.61□□□□□ -1.19
USP28-207ENST00000538475 HOOK1Q9UJC3 728 aaKnown RBP7.61□□□□□ -1.19
USP28-207ENST00000538475 MRC1P22897 1456 aa7.61□□□□□ -1.19
USP28-207ENST00000538475 ANKARQ7Z5J8 1434 aa7.61□□□□□ -1.19
USP28-207ENST00000538475 SHTN1A0MZ66 631 aa7.6□□□□□ -1.19
USP28-207ENST00000538475 CHUKO15111 745 aa7.6□□□□□ -1.19
USP28-207ENST00000538475 KIF5CO60282 957 aa7.6□□□□□ -1.19
USP28-207ENST00000538475 ZEB2O60315 1214 aa7.6□□□□□ -1.19
USP28-207ENST00000538475 THBS1P07996 1170 aa7.6□□□□□ -1.19
USP28-207ENST00000538475 NBPF7P0C2Y1 421 aaPredicted RBP7.6□□□□□ -1.19
USP28-207ENST00000538475 ATP4AP20648 1035 aa7.6□□□□□ -1.19
USP28-207ENST00000538475 NOS2P35228 1153 aa7.6□□□□□ -1.19
USP28-207ENST00000538475 ARHGAP25P42331 645 aa7.6□□□□□ -1.19
USP28-207ENST00000538475 GYS2P54840 703 aa7.6□□□□□ -1.19
USP28-207ENST00000538475 SEC13P55735 322 aa7.6□□□□□ -1.19
USP28-207ENST00000538475 NEDD9Q14511 834 aa7.6□□□□□ -1.19
USP28-207ENST00000538475 OLFM4Q6UX06 510 aa7.6□□□□□ -1.19
USP28-207ENST00000538475 PPP1R42Q7Z4L9 355 aa7.6□□□□□ -1.19
USP28-207ENST00000538475 TMEM139Q8IV31 216 aa7.6□□□□□ -1.19
USP28-207ENST00000538475 FMNL3Q8IVF7 1028 aa7.6□□□□□ -1.19
USP28-207ENST00000538475 JMYQ8N9B5 988 aa7.6□□□□□ -1.19
USP28-207ENST00000538475 PRPF38AQ8NAV1 312 aaKnown RBP7.6□□□□□ -1.19
USP28-207ENST00000538475 TSEN2Q8NCE0 465 aaKnown RBP7.6□□□□□ -1.19
USP28-207ENST00000538475 LRRN4CLQ8ND94 238 aa7.6□□□□□ -1.19
USP28-207ENST00000538475 CNNM3Q8NE01 707 aa7.6□□□□□ -1.19
USP28-207ENST00000538475 WHAMMQ8TF30 809 aa7.6□□□□□ -1.19
USP28-207ENST00000538475 ZNF274Q96GC6 653 aaPredicted RBP7.6□□□□□ -1.19
USP28-207ENST00000538475 CCDC34Q96HJ3 373 aa7.6□□□□□ -1.19
USP28-207ENST00000538475 CABS1Q96KC9 395 aa7.6□□□□□ -1.19
USP28-207ENST00000538475 GNL3LQ9NVN8 582 aaKnown RBP7.6□□□□□ -1.19
USP28-207ENST00000538475 TSPYL4Q9UJ04 414 aa7.6□□□□□ -1.19
USP28-207ENST00000538475 SUFUQ9UMX1 484 aa7.6□□□□□ -1.19
USP28-207ENST00000538475 TTF2Q9UNY4 1162 aaKnown RBP7.6□□□□□ -1.19
USP28-207ENST00000538475 SPG7Q9UQ90 795 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms