RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 PPP1R16BQ96T49 567 aa5.97□□□□□ -1.45
LRP6-203ENST00000538239 BSDC1Q9NW68 430 aaPredicted RBP5.97□□□□□ -1.45
LRP6-203ENST00000538239 PCDHA1Q9Y5I3 950 aa5.97□□□□□ -1.45
LRP6-203ENST00000538239 CRB1P82279 1406 aa5.97□□□□□ -1.45
LRP6-203ENST00000538239 K7ENM7 598 aa5.97□□□□□ -1.45
LRP6-203ENST00000538239 DDAH1O94760 285 aa5.97□□□□□ -1.45
LRP6-203ENST00000538239 TBC1D8BQ0IIM8 1120 aa5.97□□□□□ -1.45
LRP6-203ENST00000538239 PDCL2Q8N4E4 241 aa5.97□□□□□ -1.45
LRP6-203ENST00000538239 USTQ9Y2C2 406 aa5.97□□□□□ -1.45
LRP6-203ENST00000538239 LUC7L2Q9Y383 392 aaKnown RBP5.97□□□□□ -1.45
LRP6-203ENST00000538239 CARMIL3Q8ND23 1372 aa5.97□□□□□ -1.45
LRP6-203ENST00000538239 ERICH4A6NGS2 130 aa5.97□□□□□ -1.45
LRP6-203ENST00000538239 CHRNA5P30532 468 aa5.97□□□□□ -1.45
LRP6-203ENST00000538239 ANKFY1Q9P2R3 1169 aa5.97□□□□□ -1.45
LRP6-203ENST00000538239 KDM3AQ9Y4C1 1321 aa5.97□□□□□ -1.45
LRP6-203ENST00000538239 CYP2D7A0A087X1C5 515 aa5.97□□□□□ -1.45
LRP6-203ENST00000538239 GABPAQ06546 454 aa5.97□□□□□ -1.45
LRP6-203ENST00000538239 UBE3CQ15386 1083 aa5.97□□□□□ -1.45
LRP6-203ENST00000538239 PPP1R7Q15435 360 aa5.97□□□□□ -1.45
LRP6-203ENST00000538239 ME3Q16798 604 aa5.97□□□□□ -1.45
LRP6-203ENST00000538239 SLFN12Q8IYM2 578 aa5.97□□□□□ -1.45
LRP6-203ENST00000538239 PPP1R9BQ96SB3 815 aa5.97□□□□□ -1.45
LRP6-203ENST00000538239 MMS19Q96T76 1030 aa5.97□□□□□ -1.45
LRP6-203ENST00000538239 ZNF341Q9BYN7 854 aa5.97□□□□□ -1.45
LRP6-203ENST00000538239 PCDHA12Q9UN75 941 aa5.97□□□□□ -1.45
LRP6-203ENST00000538239 CDC42BPBQ9Y5S2 1711 aa5.97□□□□□ -1.45
LRP6-203ENST00000538239 CCDC175P0C221 793 aa5.97□□□□□ -1.45
LRP6-203ENST00000538239 SCG2P13521 617 aa5.97□□□□□ -1.45
LRP6-203ENST00000538239 GSPT1P15170 499 aaKnown RBP5.97□□□□□ -1.45
LRP6-203ENST00000538239 HSPA4P34932 840 aa5.97□□□□□ -1.45
LRP6-203ENST00000538239 CRKP46108 304 aa5.97□□□□□ -1.45
LRP6-203ENST00000538239 STAT2P52630 851 aa5.97□□□□□ -1.45
LRP6-203ENST00000538239 YARSP54577 528 aaKnown RBP5.97□□□□□ -1.45
LRP6-203ENST00000538239 LEO1Q8WVC0 666 aaPredicted RBP5.97□□□□□ -1.45
LRP6-203ENST00000538239 COPRSQ9NQ92 184 aa5.97□□□□□ -1.45
LRP6-203ENST00000538239 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.97□□□□□ -1.45
LRP6-203ENST00000538239 ADCY9O60503 1353 aa5.97□□□□□ -1.45
LRP6-203ENST00000538239 RNF17Q9BXT8 1623 aaKnown RBP5.96□□□□□ -1.45
LRP6-203ENST00000538239 LRRIQ4A6NIV6 560 aa5.96□□□□□ -1.45
LRP6-203ENST00000538239 KRT86O43790 486 aa5.96□□□□□ -1.45
LRP6-203ENST00000538239 GAS8O95995 478 aa5.96□□□□□ -1.45
LRP6-203ENST00000538239 CCND2P30279 289 aa5.96□□□□□ -1.45
LRP6-203ENST00000538239 ADD1P35611 737 aaKnown RBP5.96□□□□□ -1.45
LRP6-203ENST00000538239 BMS1Q14692 1282 aaKnown RBP5.96□□□□□ -1.45
LRP6-203ENST00000538239 LIN9Q5TKA1 542 aa5.96□□□□□ -1.45
LRP6-203ENST00000538239 NELFBQ8WX92 580 aa5.96□□□□□ -1.45
LRP6-203ENST00000538239 ZBTB9Q96C00 473 aa5.96□□□□□ -1.45
LRP6-203ENST00000538239 DNAI1Q9UI46 699 aa5.96□□□□□ -1.45
LRP6-203ENST00000538239 POTEB2H3BUK9 544 aa5.96□□□□□ -1.46
LRP6-203ENST00000538239 POLR3GO15318 223 aaPredicted RBP5.96□□□□□ -1.46
LRP6-203ENST00000538239 SPOPO43791 374 aa5.96□□□□□ -1.46
LRP6-203ENST00000538239 HSF2BPO75031 334 aa5.96□□□□□ -1.46
LRP6-203ENST00000538239 PPP1R2P41236 205 aa5.96□□□□□ -1.46
LRP6-203ENST00000538239 ARHGAP44Q17R89 818 aa5.96□□□□□ -1.46
LRP6-203ENST00000538239 SEL1L2Q5TEA6 688 aa5.96□□□□□ -1.46
LRP6-203ENST00000538239 CCDC155Q8N6L0 562 aa5.96□□□□□ -1.46
LRP6-203ENST00000538239 CCDC17Q96LX7 622 aa5.96□□□□□ -1.46
LRP6-203ENST00000538239 IQCGQ9H095 443 aaKnown RBP5.96□□□□□ -1.46
LRP6-203ENST00000538239 PI4KBQ9UBF8 816 aa5.96□□□□□ -1.46
LRP6-203ENST00000538239 LRFN2Q9ULH4 789 aa5.96□□□□□ -1.46
LRP6-203ENST00000538239 ARHGAP31Q2M1Z3 1444 aa5.96□□□□□ -1.46
LRP6-203ENST00000538239 A0A0G2JLW4 131 aa5.96□□□□□ -1.46
LRP6-203ENST00000538239 TMOD1P28289 359 aa5.96□□□□□ -1.46
LRP6-203ENST00000538239 ADD2P35612 726 aa5.96□□□□□ -1.46
LRP6-203ENST00000538239 MYL5Q02045 173 aa5.96□□□□□ -1.46
LRP6-203ENST00000538239 SH3RF3Q8TEJ3 882 aaPredicted RBP5.96□□□□□ -1.46
LRP6-203ENST00000538239 JAKMIP2Q96AA8 810 aa5.96□□□□□ -1.46
LRP6-203ENST00000538239 NT5C3AQ9H0P0 336 aa5.96□□□□□ -1.46
LRP6-203ENST00000538239 SPON1Q9HCB6 807 aa5.96□□□□□ -1.46
LRP6-203ENST00000538239 NRBP2Q9NSY0 501 aa5.96□□□□□ -1.46
LRP6-203ENST00000538239 SHTN1A0MZ66 631 aa5.96□□□□□ -1.46
LRP6-203ENST00000538239 CTAGE9A4FU28 777 aa5.96□□□□□ -1.46
LRP6-203ENST00000538239 E7EVH7 732 aa5.96□□□□□ -1.46
LRP6-203ENST00000538239 CYP4A11Q02928 519 aa5.96□□□□□ -1.46
LRP6-203ENST00000538239 POSTNQ15063 836 aa5.96□□□□□ -1.46
LRP6-203ENST00000538239 NEK8Q86SG6 692 aa5.96□□□□□ -1.46
LRP6-203ENST00000538239 CCDC25Q86WR0 208 aa5.96□□□□□ -1.46
LRP6-203ENST00000538239 BBXQ8WY36 941 aaPredicted RBP5.96□□□□□ -1.46
LRP6-203ENST00000538239 NOX5Q96PH1 765 aa5.96□□□□□ -1.46
LRP6-203ENST00000538239 ADPGKQ9BRR6 497 aa5.96□□□□□ -1.46
LRP6-203ENST00000538239 SERPINB13Q9UIV8 391 aa5.96□□□□□ -1.46
LRP6-203ENST00000538239 PCDHB13Q9Y5F0 798 aa5.96□□□□□ -1.46
LRP6-203ENST00000538239 UBN2Q6ZU65 1347 aa5.96□□□□□ -1.46
LRP6-203ENST00000538239 SMIM23A6NLE4 172 aa5.96□□□□□ -1.46
LRP6-203ENST00000538239 ZNF202O95125 648 aa5.96□□□□□ -1.46
LRP6-203ENST00000538239 BMP3P12645 472 aa5.96□□□□□ -1.46
LRP6-203ENST00000538239 ZNF569Q5MCW4 686 aa5.96□□□□□ -1.46
LRP6-203ENST00000538239 SYDE2Q5VT97 1194 aa5.96□□□□□ -1.46
LRP6-203ENST00000538239 SREK1Q8WXA9 508 aaKnown RBP5.96□□□□□ -1.46
LRP6-203ENST00000538239 ZNF577Q9BSK1 485 aa5.96□□□□□ -1.46
LRP6-203ENST00000538239 TDRD3Q9H7E2 651 aaKnown RBP5.96□□□□□ -1.46
LRP6-203ENST00000538239 FAM169AQ9Y6X4 670 aa5.96□□□□□ -1.46
LRP6-203ENST00000538239 MYL3P08590 195 aa5.96□□□□□ -1.46
LRP6-203ENST00000538239 P4HA1P13674 534 aa5.96□□□□□ -1.46
LRP6-203ENST00000538239 PNOCQ13519 176 aa5.96□□□□□ -1.46
LRP6-203ENST00000538239 CLEC4GQ6UXB4 293 aa5.96□□□□□ -1.46
LRP6-203ENST00000538239 ABI1Q8IZP0 508 aa5.96□□□□□ -1.46
LRP6-203ENST00000538239 AMNQ9BXJ7 453 aa5.96□□□□□ -1.46
LRP6-203ENST00000538239 PANK4Q9NVE7 773 aa5.96□□□□□ -1.46
LRP6-203ENST00000538239 CPSF1Q10570 1443 aaKnown RBP5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms