RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 LLPHQ9BRT6 129 aaKnown RBP11.95□□□□□ -0.5
RTN3-208ENST00000537981 SNRKQ9NRH2 765 aa11.95□□□□□ -0.5
RTN3-208ENST00000537981 SAR1BQ9Y6B6 198 aa11.95□□□□□ -0.5
RTN3-208ENST00000537981 ZNF609O15014 1411 aa11.95□□□□□ -0.5
RTN3-208ENST00000537981 ESYT3A0FGR9 886 aa11.94□□□□□ -0.5
RTN3-208ENST00000537981 TARSL2A2RTX5 802 aaKnown RBP11.94□□□□□ -0.5
RTN3-208ENST00000537981 SPDYE3A6NKU9 549 aa11.94□□□□□ -0.5
RTN3-208ENST00000537981 YEATS4O95619 227 aa11.94□□□□□ -0.5
RTN3-208ENST00000537981 TUBBP07437 444 aa11.94□□□□□ -0.5
RTN3-208ENST00000537981 CD44P16070 742 aaKnown RBP11.94□□□□□ -0.5
RTN3-208ENST00000537981 CAGE1Q8TC20 777 aa11.94□□□□□ -0.5
RTN3-208ENST00000537981 TTF2Q9UNY4 1162 aaKnown RBP11.94□□□□□ -0.5
RTN3-208ENST00000537981 ITSN1Q15811 1721 aa11.94□□□□□ -0.5
RTN3-208ENST00000537981 ZMYM6O95789 1325 aa11.94□□□□□ -0.5
RTN3-208ENST00000537981 UBE2Q2LH0YL09 131 aa11.94□□□□□ -0.5
RTN3-208ENST00000537981 ATP5JP18859 108 aa11.94□□□□□ -0.5
RTN3-208ENST00000537981 TMOD1P28289 359 aa11.94□□□□□ -0.5
RTN3-208ENST00000537981 RANBP1P43487 201 aa11.94□□□□□ -0.5
RTN3-208ENST00000537981 TUBP50607 506 aa11.94□□□□□ -0.5
RTN3-208ENST00000537981 MDM2Q00987 491 aaPredicted RBP11.94□□□□□ -0.5
RTN3-208ENST00000537981 TRADDQ15628 312 aa11.94□□□□□ -0.5
RTN3-208ENST00000537981 HIBCHQ6NVY1 386 aaPredicted RBP11.94□□□□□ -0.5
RTN3-208ENST00000537981 USHBP1Q8N6Y0 703 aa11.94□□□□□ -0.5
RTN3-208ENST00000537981 SMCR8Q8TEV9 937 aaPredicted RBP11.94□□□□□ -0.5
RTN3-208ENST00000537981 EBF2Q9HAK2 575 aa11.94□□□□□ -0.5
RTN3-208ENST00000537981 ARHGEF10LQ9HCE6 1279 aa11.94□□□□□ -0.5
RTN3-208ENST00000537981 HMG20BQ9P0W2 317 aa11.94□□□□□ -0.5
RTN3-208ENST00000537981 LEMD3Q9Y2U8 911 aa11.94□□□□□ -0.5
RTN3-208ENST00000537981 C15orf41Q9Y2V0 281 aa11.94□□□□□ -0.5
RTN3-208ENST00000537981 MYH7P12883 1935 aa11.94□□□□□ -0.5
RTN3-208ENST00000537981 ARHGEF10O15013 1369 aa11.94□□□□□ -0.5
RTN3-208ENST00000537981 COQ9O75208 318 aa11.93□□□□□ -0.5
RTN3-208ENST00000537981 NR1D1P20393 614 aa11.93□□□□□ -0.5
RTN3-208ENST00000537981 TUBB2AQ13885 445 aa11.93□□□□□ -0.5
RTN3-208ENST00000537981 TSHZ1Q6ZSZ6 1077 aa11.93□□□□□ -0.5
RTN3-208ENST00000537981 MICALCLQ6ZW33 695 aa11.93□□□□□ -0.5
RTN3-208ENST00000537981 KLHL23Q8NBE8 558 aa11.93□□□□□ -0.5
RTN3-208ENST00000537981 TCP11Q8WWU5 503 aa11.93□□□□□ -0.5
RTN3-208ENST00000537981 C8orf76Q96K31 380 aa11.93□□□□□ -0.5
RTN3-208ENST00000537981 FAM210AQ96ND0 272 aa11.93□□□□□ -0.5
RTN3-208ENST00000537981 SPAG5Q96R06 1193 aa11.93□□□□□ -0.5
RTN3-208ENST00000537981 EPAS1Q99814 870 aa11.93□□□□□ -0.5
RTN3-208ENST00000537981 TUBB2BQ9BVA1 445 aa11.93□□□□□ -0.5
RTN3-208ENST00000537981 TMEM165Q9HC07 324 aa11.93□□□□□ -0.5
RTN3-208ENST00000537981 CPS1P31327 1500 aa11.93□□□□□ -0.5
RTN3-208ENST00000537981 NEXMIFQ5QGS0 1516 aa11.93□□□□□ -0.5
RTN3-208ENST00000537981 FAM107AO95990 144 aa11.93□□□□□ -0.5
RTN3-208ENST00000537981 HERVK_113P62684 666 aa11.93□□□□□ -0.5
RTN3-208ENST00000537981 NBPF14Q5TI25 921 aa11.93□□□□□ -0.5
RTN3-208ENST00000537981 DNAJC14Q6Y2X3 702 aaPredicted RBP11.93□□□□□ -0.5
RTN3-208ENST00000537981 KDM7AQ6ZMT4 941 aa11.93□□□□□ -0.5
RTN3-208ENST00000537981 RINLQ6ZS11 566 aa11.93□□□□□ -0.5
RTN3-208ENST00000537981 WAPLQ7Z5K2 1190 aa11.93□□□□□ -0.5
RTN3-208ENST00000537981 SPICE1Q8N0Z3 855 aa11.93□□□□□ -0.5
RTN3-208ENST00000537981 MAGEC3Q8TD91 643 aa11.93□□□□□ -0.5
RTN3-208ENST00000537981 TBC1D5Q92609 795 aa11.93□□□□□ -0.5
RTN3-208ENST00000537981 PRCCQ92733 491 aaPredicted RBP11.93□□□□□ -0.5
RTN3-208ENST00000537981 EZH1Q92800 747 aaPredicted RBP11.93□□□□□ -0.5
RTN3-208ENST00000537981 CUL5Q93034 780 aa11.93□□□□□ -0.5
RTN3-208ENST00000537981 CCDC43Q96MW1 224 aaKnown RBP11.93□□□□□ -0.5
RTN3-208ENST00000537981 LACRTQ9GZZ8 138 aa11.93□□□□□ -0.5
RTN3-208ENST00000537981 ABHD10Q9NUJ1 306 aa11.93□□□□□ -0.5
RTN3-208ENST00000537981 SBNO1A3KN83 1393 aa11.93□□□□□ -0.5
RTN3-208ENST00000537981 DIAPH2O60879 1101 aa11.92□□□□□ -0.5
RTN3-208ENST00000537981 RTN3O95197 1032 aaPredicted RBP11.92□□□□□ -0.5
RTN3-208ENST00000537981 EPB41P11171 864 aaKnown RBP11.92□□□□□ -0.5
RTN3-208ENST00000537981 GNAT1P11488 350 aa11.92□□□□□ -0.5
RTN3-208ENST00000537981 CXCR5P32302 372 aa11.92□□□□□ -0.5
RTN3-208ENST00000537981 MDH1P40925 334 aaKnown RBP11.92□□□□□ -0.5
RTN3-208ENST00000537981 TUBB4BP68371 445 aa11.92□□□□□ -0.5
RTN3-208ENST00000537981 KIF23Q02241 960 aaPredicted RBP11.92□□□□□ -0.5
RTN3-208ENST00000537981 LAMB3Q13751 1172 aa11.92□□□□□ -0.5
RTN3-208ENST00000537981 SYNE3Q6ZMZ3 975 aa11.92□□□□□ -0.5
RTN3-208ENST00000537981 AGAP11Q8TF27 550 aa11.92□□□□□ -0.5
RTN3-208ENST00000537981 HOOK2Q96ED9 719 aa11.92□□□□□ -0.5
RTN3-208ENST00000537981 TSGA10Q9BZW7 698 aa11.92□□□□□ -0.5
RTN3-208ENST00000537981 PANK4Q9NVE7 773 aa11.92□□□□□ -0.5
RTN3-208ENST00000537981 ADD3Q9UEY8 706 aaKnown RBP11.92□□□□□ -0.5
RTN3-208ENST00000537981 A8MUI8 341 aa11.92□□□□□ -0.5
RTN3-208ENST00000537981 CLTAP09496 248 aa11.92□□□□□ -0.5
RTN3-208ENST00000537981 SLC8A1P32418 973 aa11.92□□□□□ -0.5
RTN3-208ENST00000537981 SCNN1BP51168 640 aa11.92□□□□□ -0.5
RTN3-208ENST00000537981 XRCC4Q13426 336 aa11.92□□□□□ -0.5
RTN3-208ENST00000537981 SLC39A14Q15043 492 aa11.92□□□□□ -0.5
RTN3-208ENST00000537981 SPATS2Q86XZ4 545 aaKnown RBP11.92□□□□□ -0.5
RTN3-208ENST00000537981 GPIHBP1Q8IV16 184 aa11.92□□□□□ -0.5
RTN3-208ENST00000537981 ARHGAP23Q9P227 1491 aa11.92□□□□□ -0.5
RTN3-208ENST00000537981 PI4KAP2A4QPH2 592 aa11.91□□□□□ -0.5
RTN3-208ENST00000537981 SPDYE5A6NIY4 337 aa11.91□□□□□ -0.5
RTN3-208ENST00000537981 PSMD14O00487 310 aa11.91□□□□□ -0.5
RTN3-208ENST00000537981 DPYDQ12882 1025 aa11.91□□□□□ -0.5
RTN3-208ENST00000537981 PTPAQ15257 358 aa11.91□□□□□ -0.5
RTN3-208ENST00000537981 PPP1R7Q15435 360 aa11.91□□□□□ -0.5
RTN3-208ENST00000537981 USP49Q70CQ1 688 aa11.91□□□□□ -0.5
RTN3-208ENST00000537981 DHX32Q7L7V1 743 aaKnown RBP11.91□□□□□ -0.5
RTN3-208ENST00000537981 PNMA8AQ86V59 439 aaPredicted RBP11.91□□□□□ -0.5
RTN3-208ENST00000537981 RPUSD2Q8IZ73 545 aaKnown RBP11.91□□□□□ -0.5
RTN3-208ENST00000537981 PI4KAP1Q8N8J0 262 aa11.91□□□□□ -0.5
RTN3-208ENST00000537981 B4GALNT2Q8NHY0 566 aa11.91□□□□□ -0.5
RTN3-208ENST00000537981 RUFY1Q96T51 708 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 172.6 ms