RNA–Protein interactions for RNA: ENST00000537965.5

SNHG1-207, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-207ENST00000537965 ATP2B4P23634 1241 aa6.85□□□□□ -1.31
SNHG1-207ENST00000537965 ZNF280AP59817 542 aaPredicted RBP6.85□□□□□ -1.31
SNHG1-207ENST00000537965 CALD1Q05682 793 aaKnown RBP6.85□□□□□ -1.31
SNHG1-207ENST00000537965 WDR43Q15061 677 aaKnown RBP eCLIP6.85□□□□□ -1.31
SNHG1-207ENST00000537965 C11orf91Q3C1V1 193 aa6.85□□□□□ -1.31
SNHG1-207ENST00000537965 NOM1Q5C9Z4 860 aaKnown RBP6.85□□□□□ -1.31
SNHG1-207ENST00000537965 LINC00114Q6XXX2 140 aa6.85□□□□□ -1.31
SNHG1-207ENST00000537965 CHSY3Q70JA7 882 aa6.85□□□□□ -1.31
SNHG1-207ENST00000537965 SLC51AQ86UW1 340 aa6.85□□□□□ -1.31
SNHG1-207ENST00000537965 ANKRD18AQ8IVF6 992 aa6.85□□□□□ -1.31
SNHG1-207ENST00000537965 RUNDC1Q96C34 613 aa6.85□□□□□ -1.31
SNHG1-207ENST00000537965 GCC1Q96CN9 775 aa6.85□□□□□ -1.31
SNHG1-207ENST00000537965 CDCA5Q96FF9 252 aa6.85□□□□□ -1.31
SNHG1-207ENST00000537965 MYO3BQ8WXR4 1341 aa6.84□□□□□ -1.31
SNHG1-207ENST00000537965 ELOA3CA0A087WX78 387 aaPredicted RBP6.84□□□□□ -1.31
SNHG1-207ENST00000537965 ELOA3DA6NLF2 546 aaPredicted RBP6.84□□□□□ -1.31
SNHG1-207ENST00000537965 ADM5C9JUS6 153 aa6.84□□□□□ -1.31
SNHG1-207ENST00000537965 EGFRP00533 1210 aa6.84□□□□□ -1.31
SNHG1-207ENST00000537965 PCCAP05165 728 aaPredicted RBP6.84□□□□□ -1.31
SNHG1-207ENST00000537965 DGKGP49619 791 aa6.84□□□□□ -1.31
SNHG1-207ENST00000537965 SREBF2Q12772 1141 aa6.84□□□□□ -1.31
SNHG1-207ENST00000537965 ELOA3BQ3SY89 546 aa6.84□□□□□ -1.31
SNHG1-207ENST00000537965 ANGEL2Q5VTE6 544 aaKnown RBP6.84□□□□□ -1.31
SNHG1-207ENST00000537965 DUSP27Q5VZP5 1158 aa6.84□□□□□ -1.31
SNHG1-207ENST00000537965 ELOA3Q8NG57 546 aa6.84□□□□□ -1.31
SNHG1-207ENST00000537965 CLP1Q92989 425 aaKnown RBP6.84□□□□□ -1.31
SNHG1-207ENST00000537965 TNFRSF25Q93038 417 aa6.84□□□□□ -1.31
SNHG1-207ENST00000537965 COL26A1Q96A83 441 aa6.84□□□□□ -1.31
SNHG1-207ENST00000537965 CDC5LQ99459 802 aaKnown RBP6.84□□□□□ -1.31
SNHG1-207ENST00000537965 EFCC1Q9HA90 598 aa6.84□□□□□ -1.31
SNHG1-207ENST00000537965 MYOZ2Q9NPC6 264 aa6.84□□□□□ -1.31
SNHG1-207ENST00000537965 KCNQ5Q9NR82 932 aa6.84□□□□□ -1.31
SNHG1-207ENST00000537965 LRFN2Q9ULH4 789 aa6.84□□□□□ -1.31
SNHG1-207ENST00000537965 RTL9Q8NET4 1388 aa6.83□□□□□ -1.32
SNHG1-207ENST00000537965 INPP5BP32019 993 aa6.83□□□□□ -1.32
SNHG1-207ENST00000537965 TM4SF4P48230 202 aa6.83□□□□□ -1.32
SNHG1-207ENST00000537965 SOX10P56693 466 aa6.83□□□□□ -1.32
SNHG1-207ENST00000537965 INHBEP58166 350 aa6.83□□□□□ -1.32
SNHG1-207ENST00000537965 ARMC9Q7Z3E5 817 aa6.83□□□□□ -1.32
SNHG1-207ENST00000537965 RASAL3Q86YV0 1011 aa6.83□□□□□ -1.32
SNHG1-207ENST00000537965 GSX2Q9BZM3 304 aa6.83□□□□□ -1.32
SNHG1-207ENST00000537965 CWC25Q9NXE8 425 aaPredicted RBP6.83□□□□□ -1.32
SNHG1-207ENST00000537965 CXXC1Q9P0U4 656 aaPredicted RBP6.83□□□□□ -1.32
SNHG1-207ENST00000537965 MYBBP1AQ9BQG0 1328 aaKnown RBP6.82□□□□□ -1.32
SNHG1-207ENST00000537965 PIK3R2O00459 728 aa6.82□□□□□ -1.32
SNHG1-207ENST00000537965 MICAL2O94851 1124 aa6.82□□□□□ -1.32
SNHG1-207ENST00000537965 EPB42P16452 691 aa6.82□□□□□ -1.32
SNHG1-207ENST00000537965 ALAS2P22557 587 aa6.82□□□□□ -1.32
SNHG1-207ENST00000537965 GRNP28799 593 aaKnown RBP6.82□□□□□ -1.32
SNHG1-207ENST00000537965 IDH3AP50213 366 aa6.82□□□□□ -1.32
SNHG1-207ENST00000537965 GNAI1P63096 354 aa6.82□□□□□ -1.32
SNHG1-207ENST00000537965 NEXNQ0ZGT2 675 aa6.82□□□□□ -1.32
SNHG1-207ENST00000537965 KRT24Q2M2I5 525 aa6.82□□□□□ -1.32
SNHG1-207ENST00000537965 COX20Q5RI15 118 aa6.82□□□□□ -1.32
SNHG1-207ENST00000537965 STRIP1Q5VSL9 837 aa6.82□□□□□ -1.32
SNHG1-207ENST00000537965 CCDC30Q5VVM6 783 aa6.82□□□□□ -1.32
SNHG1-207ENST00000537965 INTS3Q68E01 1043 aaKnown RBP6.82□□□□□ -1.32
SNHG1-207ENST00000537965 FBXO46Q6PJ61 603 aaPredicted RBP6.82□□□□□ -1.32
SNHG1-207ENST00000537965 DLK2Q6UY11 383 aa6.82□□□□□ -1.32
SNHG1-207ENST00000537965 RAB44Q7Z6P3 723 aaPredicted RBP6.82□□□□□ -1.32
SNHG1-207ENST00000537965 APOBEC3FQ8IUX4 373 aaKnown RBP6.82□□□□□ -1.32
SNHG1-207ENST00000537965 KCTD17Q8N5Z5 321 aa6.82□□□□□ -1.32
SNHG1-207ENST00000537965 IFT43Q96FT9 208 aa6.82□□□□□ -1.32
SNHG1-207ENST00000537965 GMLQ99445 158 aa6.82□□□□□ -1.32
SNHG1-207ENST00000537965 C11orf16Q9NQ32 467 aa6.82□□□□□ -1.32
SNHG1-207ENST00000537965 SEC31BQ9NQW1 1179 aa6.82□□□□□ -1.32
SNHG1-207ENST00000537965 BSDC1Q9NW68 430 aaPredicted RBP6.82□□□□□ -1.32
SNHG1-207ENST00000537965 LAMB1P07942 1786 aa6.82□□□□□ -1.32
SNHG1-207ENST00000537965 AK9Q5TCS8 1911 aa6.82□□□□□ -1.32
SNHG1-207ENST00000537965 UNCXA6NJT0 531 aa6.81□□□□□ -1.32
SNHG1-207ENST00000537965 UBE2Q2LH0YL09 131 aa6.81□□□□□ -1.32
SNHG1-207ENST00000537965 GNB5O14775 395 aa6.81□□□□□ -1.32
SNHG1-207ENST00000537965 FKTNO75072 461 aa6.81□□□□□ -1.32
SNHG1-207ENST00000537965 TTLL5Q6EMB2 1281 aa6.81□□□□□ -1.32
SNHG1-207ENST00000537965 OTUD7BQ6GQQ9 843 aa6.81□□□□□ -1.32
SNHG1-207ENST00000537965 CCDC146Q8IYE0 955 aa6.81□□□□□ -1.32
SNHG1-207ENST00000537965 ZNF296Q8WUU4 475 aaPredicted RBP6.81□□□□□ -1.32
SNHG1-207ENST00000537965 BHMTQ93088 406 aa6.81□□□□□ -1.32
SNHG1-207ENST00000537965 ZNF428Q96B54 188 aa6.81□□□□□ -1.32
SNHG1-207ENST00000537965 MYD88Q99836 296 aa6.81□□□□□ -1.32
SNHG1-207ENST00000537965 METTL22Q9BUU2 404 aaPredicted RBP6.81□□□□□ -1.32
SNHG1-207ENST00000537965 ANKRD2Q9GZV1 360 aa6.81□□□□□ -1.32
SNHG1-207ENST00000537965 COA1Q9GZY4 146 aa6.81□□□□□ -1.32
SNHG1-207ENST00000537965 IFT57Q9NWB7 429 aa6.81□□□□□ -1.32
SNHG1-207ENST00000537965 LEMD3Q9Y2U8 911 aa6.81□□□□□ -1.32
SNHG1-207ENST00000537965 MED23Q9ULK4 1368 aa6.81□□□□□ -1.32
SNHG1-207ENST00000537965 CEP290O15078 2479 aa6.81□□□□□ -1.32
SNHG1-207ENST00000537965 ASTN2O75129 1339 aaPredicted RBP6.8□□□□□ -1.32
SNHG1-207ENST00000537965 RBBP6Q7Z6E9 1792 aaKnown RBP6.8□□□□□ -1.32
SNHG1-207ENST00000537965 MANSC4A6NHS7 340 aaPredicted RBP6.8□□□□□ -1.32
SNHG1-207ENST00000537965 WNT10BO00744 389 aa6.8□□□□□ -1.32
SNHG1-207ENST00000537965 OPLAHO14841 1288 aa6.8□□□□□ -1.32
SNHG1-207ENST00000537965 TBC1D8O95759 1140 aa6.8□□□□□ -1.32
SNHG1-207ENST00000537965 IGHMBP2P38935 993 aaKnown RBP6.8□□□□□ -1.32
SNHG1-207ENST00000537965 CCT4P50991 539 aaKnown RBP6.8□□□□□ -1.32
SNHG1-207ENST00000537965 ARSDP51689 593 aa6.8□□□□□ -1.32
SNHG1-207ENST00000537965 CTSWP56202 376 aa6.8□□□□□ -1.32
SNHG1-207ENST00000537965 CCINQ13939 588 aa6.8□□□□□ -1.32
SNHG1-207ENST00000537965 ARHGEF6Q15052 776 aa6.8□□□□□ -1.32
SNHG1-207ENST00000537965 C16orf46Q6P387 395 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms