RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 VCAM1P19320 739 aa28.28■■■□□ 2.12
HMGA2-208ENST00000537429 METAP2P50579 478 aaKnown RBP eCLIP28.28■■■□□ 2.12
HMGA2-208ENST00000537429 CCDC144CPQ8IYA2 1237 aa28.28■■■□□ 2.12
HMGA2-208ENST00000537429 PROCA1Q8NCQ7 364 aaPredicted RBP28.28■■■□□ 2.12
HMGA2-208ENST00000537429 MAD2L2Q9UI95 211 aa28.28■■■□□ 2.12
HMGA2-208ENST00000537429 LOC285556D6RIA3 1793 aa28.28■■■□□ 2.12
HMGA2-208ENST00000537429 PALM3A6NDB9 673 aaPredicted RBP28.28■■■□□ 2.12
HMGA2-208ENST00000537429 GOLGA8AA7E2F4 631 aa28.28■■■□□ 2.12
HMGA2-208ENST00000537429 PFKFB2O60825 505 aa28.28■■■□□ 2.12
HMGA2-208ENST00000537429 BMP3P12645 472 aa28.28■■■□□ 2.12
HMGA2-208ENST00000537429 ZNF543Q08ER8 600 aa28.28■■■□□ 2.12
HMGA2-208ENST00000537429 STK3Q13188 491 aa28.28■■■□□ 2.12
HMGA2-208ENST00000537429 CTCFLQ8NI51 663 aaPredicted RBP28.28■■■□□ 2.12
HMGA2-208ENST00000537429 NUP88Q99567 741 aaPredicted RBP28.28■■■□□ 2.12
HMGA2-208ENST00000537429 SLKQ9H2G2 1235 aaPredicted RBP28.28■■■□□ 2.12
HMGA2-208ENST00000537429 FAM217BQ9NTX9 383 aaPredicted RBP28.28■■■□□ 2.12
HMGA2-208ENST00000537429 PARP1P09874 1014 aaKnown RBP28.27■■■□□ 2.12
HMGA2-208ENST00000537429 HSPA6P17066 643 aa28.27■■■□□ 2.12
HMGA2-208ENST00000537429 PPP2R5BQ15173 497 aa28.27■■■□□ 2.12
HMGA2-208ENST00000537429 ASPRV1Q53RT3 343 aa28.27■■■□□ 2.12
HMGA2-208ENST00000537429 FAM83BQ5T0W9 1011 aa28.27■■■□□ 2.12
HMGA2-208ENST00000537429 GPATCH4Q5T3I0 446 aaKnown RBP28.27■■■□□ 2.12
HMGA2-208ENST00000537429 FASTKD5Q7L8L6 764 aaKnown RBP28.27■■■□□ 2.12
HMGA2-208ENST00000537429 STAG2Q8N3U4 1231 aa28.27■■■□□ 2.12
HMGA2-208ENST00000537429 TMX3Q96JJ7 454 aa28.27■■■□□ 2.12
HMGA2-208ENST00000537429 SH2B1Q9NRF2 756 aaPredicted RBP28.27■■■□□ 2.12
HMGA2-208ENST00000537429 ISY1Q9ULR0 285 aaKnown RBP28.27■■■□□ 2.12
HMGA2-208ENST00000537429 CETPP11597 493 aa28.26■■■□□ 2.11
HMGA2-208ENST00000537429 CDC27P30260 824 aa28.26■■■□□ 2.11
HMGA2-208ENST00000537429 KIF5BP33176 963 aa28.26■■■□□ 2.11
HMGA2-208ENST00000537429 CCT2P78371 535 aaKnown RBP28.26■■■□□ 2.11
HMGA2-208ENST00000537429 RTN1Q16799 776 aa28.26■■■□□ 2.11
HMGA2-208ENST00000537429 GADL1Q6ZQY3 521 aa28.26■■■□□ 2.11
HMGA2-208ENST00000537429 KCTD1Q719H9 257 aa28.26■■■□□ 2.11
HMGA2-208ENST00000537429 RBM19Q9Y4C8 960 aaKnown RBP28.26■■■□□ 2.11
HMGA2-208ENST00000537429 FRMPD2Q68DX3 1309 aaPredicted RBP28.25■■■□□ 2.11
HMGA2-208ENST00000537429 GOLGA8HP0CJ92 632 aa28.25■■■□□ 2.11
HMGA2-208ENST00000537429 SCRN1Q12765 414 aa28.25■■■□□ 2.11
HMGA2-208ENST00000537429 CCDC96Q2M329 555 aa28.25■■■□□ 2.11
HMGA2-208ENST00000537429 CAPNS2Q96L46 248 aa28.25■■■□□ 2.11
HMGA2-208ENST00000537429 RBM28Q9NW13 759 aaKnown RBP28.25■■■□□ 2.11
HMGA2-208ENST00000537429 TESPA1A2RU30 521 aaPredicted RBP28.24■■■□□ 2.11
HMGA2-208ENST00000537429 ADD1P35611 737 aaKnown RBP28.24■■■□□ 2.11
HMGA2-208ENST00000537429 NECAB1Q8N987 351 aa28.24■■■□□ 2.11
HMGA2-208ENST00000537429 GTF3C6Q969F1 213 aa28.24■■■□□ 2.11
HMGA2-208ENST00000537429 RPAP3Q9H6T3 665 aaPredicted RBP28.24■■■□□ 2.11
HMGA2-208ENST00000537429 NCOA5Q9HCD5 579 aaKnown RBP28.24■■■□□ 2.11
HMGA2-208ENST00000537429 CCL15-CCL14A0A0B4J2E2 113 aa28.23■■■□□ 2.11
HMGA2-208ENST00000537429 CCDC196A0A1B0GTZ2 297 aa28.23■■■□□ 2.11
HMGA2-208ENST00000537429 MANSC4A6NHS7 340 aaPredicted RBP28.23■■■□□ 2.11
HMGA2-208ENST00000537429 K7ELQ4 463 aaPredicted RBP28.23■■■□□ 2.11
HMGA2-208ENST00000537429 CCL15Q16663 113 aa28.23■■■□□ 2.11
HMGA2-208ENST00000537429 TREML2Q5T2D2 321 aa28.23■■■□□ 2.11
HMGA2-208ENST00000537429 GPAT2Q6NUI2 795 aa28.23■■■□□ 2.11
HMGA2-208ENST00000537429 HSCBQ8IWL3 235 aa28.23■■■□□ 2.11
HMGA2-208ENST00000537429 BRI3BPQ8WY22 251 aa28.23■■■□□ 2.11
HMGA2-208ENST00000537429 GPCPD1Q9NPB8 672 aa28.23■■■□□ 2.11
HMGA2-208ENST00000537429 AGTPBP1Q9UPW5 1226 aa28.23■■■□□ 2.11
HMGA2-208ENST00000537429 KLRF2D3W0D1 207 aa28.23■■■□□ 2.11
HMGA2-208ENST00000537429 ST3GAL1Q11201 340 aa28.23■■■□□ 2.11
HMGA2-208ENST00000537429 TTBK2Q6IQ55 1244 aa28.23■■■□□ 2.11
HMGA2-208ENST00000537429 TMEM232C9JQI7 657 aa28.22■■■□□ 2.11
HMGA2-208ENST00000537429 PLA2G6O60733 806 aa28.22■■■□□ 2.11
HMGA2-208ENST00000537429 HOXA7P31268 230 aaPredicted RBP28.22■■■□□ 2.11
HMGA2-208ENST00000537429 GNAQP50148 359 aa28.22■■■□□ 2.11
HMGA2-208ENST00000537429 PLEKHA8P1O95397 391 aa28.21■■■□□ 2.11
HMGA2-208ENST00000537429 BTNL9Q6UXG8 535 aa28.21■■■□□ 2.11
HMGA2-208ENST00000537429 CATSPERGQ6ZRH7 1159 aa28.21■■■□□ 2.11
HMGA2-208ENST00000537429 TMTC3Q6ZXV5 915 aa28.21■■■□□ 2.11
HMGA2-208ENST00000537429 FEM1BQ9UK73 627 aa28.21■■■□□ 2.11
HMGA2-208ENST00000537429 USP17L15C9J2P7 530 aa28.2■■■□□ 2.1
HMGA2-208ENST00000537429 USP17L13C9JLJ4 530 aa28.2■■■□□ 2.1
HMGA2-208ENST00000537429 USP17L11C9JVI0 530 aa28.2■■■□□ 2.1
HMGA2-208ENST00000537429 USP17L18D6R9N7 530 aa28.2■■■□□ 2.1
HMGA2-208ENST00000537429 USP17L22D6RA61 530 aa28.2■■■□□ 2.1
HMGA2-208ENST00000537429 USP17L17D6RBQ6 530 aa28.2■■■□□ 2.1
HMGA2-208ENST00000537429 USP17L19D6RCP7 530 aa28.2■■■□□ 2.1
HMGA2-208ENST00000537429 USP17L20D6RJB6 530 aa28.2■■■□□ 2.1
HMGA2-208ENST00000537429 STAT2P52630 851 aa28.2■■■□□ 2.1
HMGA2-208ENST00000537429 INHBEP58166 350 aa28.2■■■□□ 2.1
HMGA2-208ENST00000537429 USP17L24Q0WX57 530 aa28.2■■■□□ 2.1
HMGA2-208ENST00000537429 NOGQ13253 232 aa28.2■■■□□ 2.1
HMGA2-208ENST00000537429 NTRK3Q16288 839 aa28.2■■■□□ 2.1
HMGA2-208ENST00000537429 NBPF11Q86T75 865 aa28.2■■■□□ 2.1
HMGA2-208ENST00000537429 SRBD1Q8N5C6 995 aaKnown RBP28.2■■■□□ 2.1
HMGA2-208ENST00000537429 PTPN18Q99952 460 aa28.2■■■□□ 2.1
HMGA2-208ENST00000537429 LZTS2Q9BRK4 669 aa28.2■■■□□ 2.1
HMGA2-208ENST00000537429 TANGO6Q9C0B7 1094 aa28.2■■■□□ 2.1
HMGA2-208ENST00000537429 UBA5Q9GZZ9 404 aa28.2■■■□□ 2.1
HMGA2-208ENST00000537429 DHX16O60231 1041 aaKnown RBP28.19■■■□□ 2.1
HMGA2-208ENST00000537429 SMARCA1P28370 1054 aa28.19■■■□□ 2.1
HMGA2-208ENST00000537429 CCDC83Q8IWF9 413 aa28.19■■■□□ 2.1
HMGA2-208ENST00000537429 CMTR1Q8N1G2 835 aaKnown RBP28.19■■■□□ 2.1
HMGA2-208ENST00000537429 CHURC1Q8WUH1 139 aa28.19■■■□□ 2.1
HMGA2-208ENST00000537429 ZIC5Q96T25 663 aa28.19■■■□□ 2.1
HMGA2-208ENST00000537429 CPVLQ9H3G5 476 aa28.19■■■□□ 2.1
HMGA2-208ENST00000537429 FBXO28Q9NVF7 368 aa28.19■■■□□ 2.1
HMGA2-208ENST00000537429 BTBD19C9JJ37 291 aa28.18■■■□□ 2.1
HMGA2-208ENST00000537429 AOC2O75106 756 aa28.18■■■□□ 2.1
HMGA2-208ENST00000537429 SLC16A2P36021 539 aa28.18■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms