RNA–Protein interactions for RNA: ENST00000537304.5

LMO3-215, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO3, Length 1,685 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-215ENST00000537304 TACC1O75410 805 aa12.12□□□□□ -0.47
LMO3-215ENST00000537304 ATP1A1P05023 1023 aaKnown RBP12.12□□□□□ -0.47
LMO3-215ENST00000537304 FNTAP49354 379 aa12.12□□□□□ -0.47
LMO3-215ENST00000537304 SATB1Q01826 763 aa12.12□□□□□ -0.47
LMO3-215ENST00000537304 FKBP4Q02790 459 aaKnown RBP eCLIP12.12□□□□□ -0.47
LMO3-215ENST00000537304 IFFO1Q0D2I5 559 aa12.12□□□□□ -0.47
LMO3-215ENST00000537304 KIF5AQ12840 1032 aa12.12□□□□□ -0.47
LMO3-215ENST00000537304 KCNJ12Q14500 433 aa12.12□□□□□ -0.47
LMO3-215ENST00000537304 PREPLQ4J6C6 727 aaPredicted RBP12.12□□□□□ -0.47
LMO3-215ENST00000537304 MICU3Q86XE3 530 aa12.12□□□□□ -0.47
LMO3-215ENST00000537304 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.12□□□□□ -0.47
LMO3-215ENST00000537304 PHKBQ93100 1093 aa12.12□□□□□ -0.47
LMO3-215ENST00000537304 AIFM3Q96NN9 605 aa12.12□□□□□ -0.47
LMO3-215ENST00000537304 KRT23Q9C075 422 aa12.12□□□□□ -0.47
LMO3-215ENST00000537304 NBPF3Q9H094 633 aa12.12□□□□□ -0.47
LMO3-215ENST00000537304 CSRNP2Q9H175 543 aa12.12□□□□□ -0.47
LMO3-215ENST00000537304 EPN3Q9H201 632 aa12.12□□□□□ -0.47
LMO3-215ENST00000537304 SLC52A2Q9HAB3 445 aa12.12□□□□□ -0.47
LMO3-215ENST00000537304 CWC25Q9NXE8 425 aaPredicted RBP12.12□□□□□ -0.47
LMO3-215ENST00000537304 RNF14Q9UBS8 474 aa12.12□□□□□ -0.47
LMO3-215ENST00000537304 TSKSQ9UJT2 592 aa12.12□□□□□ -0.47
LMO3-215ENST00000537304 CTNND2Q9UQB3 1225 aa12.12□□□□□ -0.47
LMO3-215ENST00000537304 KIF3CO14782 793 aa12.11□□□□□ -0.47
LMO3-215ENST00000537304 FOXP2O15409 715 aa12.11□□□□□ -0.47
LMO3-215ENST00000537304 GTPBP6O43824 516 aaPredicted RBP12.11□□□□□ -0.47
LMO3-215ENST00000537304 TOB1P50616 345 aaPredicted RBP12.11□□□□□ -0.47
LMO3-215ENST00000537304 VAV2P52735 878 aa12.11□□□□□ -0.47
LMO3-215ENST00000537304 TIMM10P62072 90 aa12.11□□□□□ -0.47
LMO3-215ENST00000537304 UBXN1Q04323 297 aa12.11□□□□□ -0.47
LMO3-215ENST00000537304 MEA1Q16626 185 aa12.11□□□□□ -0.47
LMO3-215ENST00000537304 FBXW10Q5XX13 1052 aa12.11□□□□□ -0.47
LMO3-215ENST00000537304 ARMC9Q7Z3E5 817 aa12.11□□□□□ -0.47
LMO3-215ENST00000537304 TTC5Q8N0Z6 440 aa12.11□□□□□ -0.47
LMO3-215ENST00000537304 ALS2CR12Q96Q35 445 aa12.11□□□□□ -0.47
LMO3-215ENST00000537304 VCPKMTQ9H867 229 aa12.11□□□□□ -0.47
LMO3-215ENST00000537304 VEZTQ9HBM0 779 aa12.11□□□□□ -0.47
LMO3-215ENST00000537304 MAGEC2Q9UBF1 373 aaPredicted RBP12.11□□□□□ -0.47
LMO3-215ENST00000537304 LAMB4A4D0S4 1761 aa12.11□□□□□ -0.47
LMO3-215ENST00000537304 SCN11AQ9UI33 1791 aa12.11□□□□□ -0.47
LMO3-215ENST00000537304 MYH8P13535 1937 aa12.11□□□□□ -0.47
LMO3-215ENST00000537304 A0A0U1RQJ8 604 aa12.1□□□□□ -0.47
LMO3-215ENST00000537304 PRAMEF22A3QJZ6 481 aa12.1□□□□□ -0.47
LMO3-215ENST00000537304 LGALS16A8MUM7 142 aa12.1□□□□□ -0.47
LMO3-215ENST00000537304 BTBD18B2RXH4 712 aa12.1□□□□□ -0.47
LMO3-215ENST00000537304 IDEP14735 1019 aa12.1□□□□□ -0.47
LMO3-215ENST00000537304 EZRP15311 586 aaKnown RBP12.1□□□□□ -0.47
LMO3-215ENST00000537304 SLC8A1P32418 973 aa12.1□□□□□ -0.47
LMO3-215ENST00000537304 ELF1P32519 619 aa12.1□□□□□ -0.47
LMO3-215ENST00000537304 CCT6AP40227 531 aaKnown RBP12.1□□□□□ -0.47
LMO3-215ENST00000537304 PPP1R2P41236 205 aa12.1□□□□□ -0.47
LMO3-215ENST00000537304 PAFAH1B1P43034 410 aa12.1□□□□□ -0.47
LMO3-215ENST00000537304 DNM2P50570 870 aa12.1□□□□□ -0.47
LMO3-215ENST00000537304 NAP1L1P55209 391 aaKnown RBP12.1□□□□□ -0.47
LMO3-215ENST00000537304 STX17P56962 302 aa12.1□□□□□ -0.47
LMO3-215ENST00000537304 UBE3CQ15386 1083 aa12.1□□□□□ -0.47
LMO3-215ENST00000537304 SPA17Q15506 151 aa12.1□□□□□ -0.47
LMO3-215ENST00000537304 RTN1Q16799 776 aa12.1□□□□□ -0.47
LMO3-215ENST00000537304 ZNF658Q5TYW1 1059 aaPredicted RBP12.1□□□□□ -0.47
LMO3-215ENST00000537304 LMOD2Q6P5Q4 547 aa12.1□□□□□ -0.47
LMO3-215ENST00000537304 FMNL3Q8IVF7 1028 aa12.1□□□□□ -0.47
LMO3-215ENST00000537304 CD302Q8IX05 232 aa12.1□□□□□ -0.47
LMO3-215ENST00000537304 IFT20Q8IY31 132 aa12.1□□□□□ -0.47
LMO3-215ENST00000537304 IGDCC4Q8TDY8 1250 aa12.1□□□□□ -0.47
LMO3-215ENST00000537304 ATRIPQ8WXE1 791 aa12.1□□□□□ -0.47
LMO3-215ENST00000537304 ZNF512BQ96KM6 892 aaPredicted RBP12.1□□□□□ -0.47
LMO3-215ENST00000537304 PURBQ96QR8 312 aaKnown RBP12.1□□□□□ -0.47
LMO3-215ENST00000537304 THAP9Q9H5L6 903 aa12.1□□□□□ -0.47
LMO3-215ENST00000537304 LY9Q9HBG7 655 aa12.1□□□□□ -0.47
LMO3-215ENST00000537304 RBM28Q9NW13 759 aaKnown RBP12.1□□□□□ -0.47
LMO3-215ENST00000537304 MCM8Q9UJA3 840 aa12.1□□□□□ -0.47
LMO3-215ENST00000537304 DISP2A7MBM2 1401 aa12.1□□□□□ -0.47
LMO3-215ENST00000537304 A0A1B0GUA9 196 aa12.1□□□□□ -0.47
LMO3-215ENST00000537304 ERICH2A1L162 156 aa12.1□□□□□ -0.47
LMO3-215ENST00000537304 HMGB1P1B2RPK0 211 aaPredicted RBP12.1□□□□□ -0.47
LMO3-215ENST00000537304 RANBP6O60518 1105 aaKnown RBP12.1□□□□□ -0.47
LMO3-215ENST00000537304 MYL1P05976 194 aa12.1□□□□□ -0.47
LMO3-215ENST00000537304 CD44P16070 742 aaKnown RBP12.1□□□□□ -0.47
LMO3-215ENST00000537304 ACTN3Q08043 901 aaPredicted RBP12.1□□□□□ -0.47
LMO3-215ENST00000537304 PAK2Q13177 524 aa12.1□□□□□ -0.47
LMO3-215ENST00000537304 CCDC40Q4G0X9 1142 aa12.1□□□□□ -0.47
LMO3-215ENST00000537304 SPECC1Q5M775 1068 aa12.1□□□□□ -0.47
LMO3-215ENST00000537304 CCDC181Q5TID7 509 aa12.1□□□□□ -0.47
LMO3-215ENST00000537304 RRAGBQ5VZM2 374 aa12.1□□□□□ -0.47
LMO3-215ENST00000537304 CYB5R4Q7L1T6 521 aa12.1□□□□□ -0.47
LMO3-215ENST00000537304 RAB11FIP4Q86YS3 637 aa12.1□□□□□ -0.47
LMO3-215ENST00000537304 FAM114A1Q8IWE2 563 aa12.1□□□□□ -0.47
LMO3-215ENST00000537304 MREGQ8N565 214 aa12.1□□□□□ -0.47
LMO3-215ENST00000537304 MB21D1Q8N884 522 aa12.1□□□□□ -0.47
LMO3-215ENST00000537304 JADE2Q9NQC1 790 aa12.1□□□□□ -0.47
LMO3-215ENST00000537304 KLC4Q9NSK0 619 aa12.1□□□□□ -0.47
LMO3-215ENST00000537304 STIM2Q9P246 746 aa12.1□□□□□ -0.47
LMO3-215ENST00000537304 SNX12Q9UMY4 172 aa12.1□□□□□ -0.47
LMO3-215ENST00000537304 REXO2Q9Y3B8 237 aaKnown RBP12.1□□□□□ -0.47
LMO3-215ENST00000537304 RGPD2P0DJD1 1756 aa12.09□□□□□ -0.47
LMO3-215ENST00000537304 LRP6O75581 1613 aa12.09□□□□□ -0.47
LMO3-215ENST00000537304 IFIT3O14879 490 aaKnown RBP12.09□□□□□ -0.47
LMO3-215ENST00000537304 MRPL12P52815 198 aaKnown RBP12.09□□□□□ -0.47
LMO3-215ENST00000537304 HERVK_113P62684 666 aa12.09□□□□□ -0.47
LMO3-215ENST00000537304 CRYMQ14894 314 aa12.09□□□□□ -0.47
LMO3-215ENST00000537304 CEP85LQ5SZL2 805 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms