RNA–Protein interactions for RNA: ENST00000536545.5

HMGA2-206, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-206ENST00000536545 TTC38Q5R3I4 469 aa26■■□□□ 1.75
HMGA2-206ENST00000536545 BLIDQ8IZY5 108 aa26■■□□□ 1.75
HMGA2-206ENST00000536545 CCDC148Q8NFR7 591 aa26■■□□□ 1.75
HMGA2-206ENST00000536545 DHX36Q9H2U1 1008 aaKnown RBP26■■□□□ 1.75
HMGA2-206ENST00000536545 M0R2N6 131 aa26■■□□□ 1.75
HMGA2-206ENST00000536545 PDHBP11177 359 aa26■■□□□ 1.75
HMGA2-206ENST00000536545 RBM5P52756 815 aaKnown RBP eCLIP26■■□□□ 1.75
HMGA2-206ENST00000536545 ZSCAN30Q86W11 494 aa26■■□□□ 1.75
HMGA2-206ENST00000536545 A0A087WWV3 80 aa25.99■■□□□ 1.75
HMGA2-206ENST00000536545 USP17L5A8MUK1 530 aa25.99■■□□□ 1.75
HMGA2-206ENST00000536545 SNHG28P0DPA3 235 aa25.99■■□□□ 1.75
HMGA2-206ENST00000536545 PIK3AP1Q6ZUJ8 805 aa25.99■■□□□ 1.75
HMGA2-206ENST00000536545 CLEC10AQ8IUN9 316 aa25.99■■□□□ 1.75
HMGA2-206ENST00000536545 COL2A1P02458 1487 aaPredicted RBP25.99■■□□□ 1.75
HMGA2-206ENST00000536545 TTLL1O95922 423 aa25.98■■□□□ 1.75
HMGA2-206ENST00000536545 GALNT17Q6IS24 598 aa25.98■■□□□ 1.75
HMGA2-206ENST00000536545 HEATR3Q7Z4Q2 680 aa25.98■■□□□ 1.75
HMGA2-206ENST00000536545 LRRC47Q8N1G4 583 aaKnown RBP25.98■■□□□ 1.75
HMGA2-206ENST00000536545 CPVLQ9H3G5 476 aa25.98■■□□□ 1.75
HMGA2-206ENST00000536545 FAM13BQ9NYF5 915 aa25.98■■□□□ 1.75
HMGA2-206ENST00000536545 SPECC1Q5M775 1068 aa25.97■■□□□ 1.75
HMGA2-206ENST00000536545 KRBA2Q6ZNG9 492 aa25.97■■□□□ 1.75
HMGA2-206ENST00000536545 SH3BP5LQ7L8J4 393 aa25.97■■□□□ 1.75
HMGA2-206ENST00000536545 ELOA2Q8IYF1 753 aaPredicted RBP25.97■■□□□ 1.75
HMGA2-206ENST00000536545 CEP57L1Q8IYX8 460 aa25.97■■□□□ 1.75
HMGA2-206ENST00000536545 DDTLA6NHG4 134 aaPredicted RBP25.97■■□□□ 1.75
HMGA2-206ENST00000536545 ATP2C1P98194 919 aaPredicted RBP25.97■■□□□ 1.75
HMGA2-206ENST00000536545 TCP10Q12799 353 aa25.97■■□□□ 1.75
HMGA2-206ENST00000536545 ASPRV1Q53RT3 343 aa25.97■■□□□ 1.75
HMGA2-206ENST00000536545 CCDC17Q96LX7 622 aa25.97■■□□□ 1.75
HMGA2-206ENST00000536545 CSRNP2Q9H175 543 aa25.97■■□□□ 1.75
HMGA2-206ENST00000536545 TUBE1Q9UJT0 475 aa25.97■■□□□ 1.75
HMGA2-206ENST00000536545 ATRNL1Q5VV63 1379 aa25.96■■□□□ 1.75
HMGA2-206ENST00000536545 CFAP100Q494V2 611 aa25.96■■□□□ 1.75
HMGA2-206ENST00000536545 METTL16Q86W50 562 aaKnown RBP25.96■■□□□ 1.75
HMGA2-206ENST00000536545 FERMT2Q96AC1 680 aa25.96■■□□□ 1.75
HMGA2-206ENST00000536545 RRP36Q96EU6 259 aaKnown RBP25.96■■□□□ 1.75
HMGA2-206ENST00000536545 RIOX1Q9H6W3 641 aa25.96■■□□□ 1.75
HMGA2-206ENST00000536545 SLURP2P0DP57 97 aa25.95■■□□□ 1.75
HMGA2-206ENST00000536545 ZNF174Q15697 407 aa25.95■■□□□ 1.75
HMGA2-206ENST00000536545 LONRF3Q496Y0 759 aa25.95■■□□□ 1.75
HMGA2-206ENST00000536545 PI4KBQ9UBF8 816 aa25.95■■□□□ 1.75
HMGA2-206ENST00000536545 EIF6P56537 245 aaKnown RBP25.95■■□□□ 1.74
HMGA2-206ENST00000536545 PLCB2Q00722 1185 aa25.95■■□□□ 1.74
HMGA2-206ENST00000536545 DPCR1Q3MIW9 517 aa25.95■■□□□ 1.74
HMGA2-206ENST00000536545 RSBN1LQ6PCB5 846 aaPredicted RBP25.95■■□□□ 1.74
HMGA2-206ENST00000536545 DHX40Q8IX18 779 aaKnown RBP25.95■■□□□ 1.74
HMGA2-206ENST00000536545 CLIP2Q9UDT6 1046 aa25.95■■□□□ 1.74
HMGA2-206ENST00000536545 MYH4Q9Y623 1939 aa25.94■■□□□ 1.74
HMGA2-206ENST00000536545 NLRP12P59046 1061 aa25.94■■□□□ 1.74
HMGA2-206ENST00000536545 PPP4R3BQ5MIZ7 849 aa25.94■■□□□ 1.74
HMGA2-206ENST00000536545 ZMYND12Q9H0C1 365 aa25.94■■□□□ 1.74
HMGA2-206ENST00000536545 EIF2AK3Q9NZJ5 1116 aaKnown RBP25.94■■□□□ 1.74
HMGA2-206ENST00000536545 PCDHA6Q9UN73 950 aa25.94■■□□□ 1.74
HMGA2-206ENST00000536545 PCDHA8Q9Y5H6 950 aa25.94■■□□□ 1.74
HMGA2-206ENST00000536545 FRMPD2Q68DX3 1309 aaPredicted RBP25.93■■□□□ 1.74
HMGA2-206ENST00000536545 ENTPD3O75355 529 aa25.93■■□□□ 1.74
HMGA2-206ENST00000536545 PTMAP06454 111 aaKnown RBP25.93■■□□□ 1.74
HMGA2-206ENST00000536545 CNNM3Q8NE01 707 aa25.93■■□□□ 1.74
HMGA2-206ENST00000536545 RASGRP4Q8TDF6 673 aa25.93■■□□□ 1.74
HMGA2-206ENST00000536545 GMLQ99445 158 aa25.93■■□□□ 1.74
HMGA2-206ENST00000536545 BPIFA3Q9BQP9 254 aa25.93■■□□□ 1.74
HMGA2-206ENST00000536545 NAT10Q9H0A0 1025 aaKnown RBP25.93■■□□□ 1.74
HMGA2-206ENST00000536545 TDRD3Q9H7E2 651 aaKnown RBP25.93■■□□□ 1.74
HMGA2-206ENST00000536545 ZNF277Q9NRM2 450 aaPredicted RBP25.93■■□□□ 1.74
HMGA2-206ENST00000536545 CLCN1P35523 988 aa25.92■■□□□ 1.74
HMGA2-206ENST00000536545 PTGDRQ13258 359 aa25.92■■□□□ 1.74
HMGA2-206ENST00000536545 PNOCQ13519 176 aa25.92■■□□□ 1.74
HMGA2-206ENST00000536545 USP49Q70CQ1 688 aa25.92■■□□□ 1.74
HMGA2-206ENST00000536545 LARGE2Q8N3Y3 721 aa25.92■■□□□ 1.74
HMGA2-206ENST00000536545 CCDC12Q8WUD4 166 aaPredicted RBP25.92■■□□□ 1.74
HMGA2-206ENST00000536545 PIGSQ96S52 555 aa25.92■■□□□ 1.74
HMGA2-206ENST00000536545 VPS33BQ9H267 617 aa25.92■■□□□ 1.74
HMGA2-206ENST00000536545 SEC63Q9UGP8 760 aaKnown RBP25.92■■□□□ 1.74
HMGA2-206ENST00000536545 FAM196BA6NMK8 535 aa25.92■■□□□ 1.74
HMGA2-206ENST00000536545 MPHOSPH10O00566 681 aaKnown RBP25.92■■□□□ 1.74
HMGA2-206ENST00000536545 VIL1P09327 827 aaKnown RBP25.92■■□□□ 1.74
HMGA2-206ENST00000536545 NAPAP54920 295 aa25.92■■□□□ 1.74
HMGA2-206ENST00000536545 ZNF543Q08ER8 600 aa25.92■■□□□ 1.74
HMGA2-206ENST00000536545 ZRSR1Q15695 479 aaKnown RBP25.92■■□□□ 1.74
HMGA2-206ENST00000536545 TATDN1Q6P1N9 297 aa25.92■■□□□ 1.74
HMGA2-206ENST00000536545 HOMER1Q86YM7 354 aa25.92■■□□□ 1.74
HMGA2-206ENST00000536545 ZKSCAN5Q9Y2L8 839 aa25.92■■□□□ 1.74
HMGA2-206ENST00000536545 PSMD14O00487 310 aa25.91■■□□□ 1.74
HMGA2-206ENST00000536545 POLR2DO15514 142 aaKnown RBP25.91■■□□□ 1.74
HMGA2-206ENST00000536545 ACTN4O43707 911 aaKnown RBP25.91■■□□□ 1.74
HMGA2-206ENST00000536545 MDM2Q00987 491 aaPredicted RBP25.91■■□□□ 1.74
HMGA2-206ENST00000536545 SOGA3Q5TF21 947 aa25.91■■□□□ 1.74
HMGA2-206ENST00000536545 SARM1Q6SZW1 724 aa25.91■■□□□ 1.74
HMGA2-206ENST00000536545 PRMT6Q96LA8 375 aaPredicted RBP25.91■■□□□ 1.74
HMGA2-206ENST00000536545 UBA5Q9GZZ9 404 aa25.91■■□□□ 1.74
HMGA2-206ENST00000536545 CCDC194A0A1B0GVG4 234 aa25.9■■□□□ 1.74
HMGA2-206ENST00000536545 GOLGA6L19H0YKK7 550 aa25.9■■□□□ 1.74
HMGA2-206ENST00000536545 hCG_1984214I3L0E3 225 aa25.9■■□□□ 1.74
HMGA2-206ENST00000536545 BIN1O00499 593 aa25.9■■□□□ 1.74
HMGA2-206ENST00000536545 PLA2G4DQ86XP0 818 aa25.9■■□□□ 1.74
HMGA2-206ENST00000536545 ZSCAN29Q8IWY8 852 aaPredicted RBP25.9■■□□□ 1.74
HMGA2-206ENST00000536545 ZNF713Q8N859 430 aaPredicted RBP25.9■■□□□ 1.74
HMGA2-206ENST00000536545 ESYT2A0FGR8 921 aa25.9■■□□□ 1.74
HMGA2-206ENST00000536545 SPDYE2BA6NHP3 402 aa25.9■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms