RNA–Protein interactions for RNA: ENST00000536241.1

CDCA3-206, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 1,490 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-206ENST00000536241 SPDYE5A6NIY4 337 aa13.41□□□□□ -0.26
CDCA3-206ENST00000536241 C19orf81C9J6K1 198 aa13.41□□□□□ -0.26
CDCA3-206ENST00000536241 KLRF2D3W0D1 207 aa13.41□□□□□ -0.26
CDCA3-206ENST00000536241 IRF6O14896 467 aa13.41□□□□□ -0.26
CDCA3-206ENST00000536241 PLEKHA8P1O95397 391 aa13.41□□□□□ -0.26
CDCA3-206ENST00000536241 ZNF543Q08ER8 600 aa13.41□□□□□ -0.26
CDCA3-206ENST00000536241 CCDC96Q2M329 555 aa13.41□□□□□ -0.26
CDCA3-206ENST00000536241 TTBK2Q6IQ55 1244 aa13.41□□□□□ -0.26
CDCA3-206ENST00000536241 NBPF11Q86T75 865 aa13.41□□□□□ -0.26
CDCA3-206ENST00000536241 SRBD1Q8N5C6 995 aaKnown RBP13.41□□□□□ -0.26
CDCA3-206ENST00000536241 INTS4Q96HW7 963 aaKnown RBP13.41□□□□□ -0.26
CDCA3-206ENST00000536241 UBA5Q9GZZ9 404 aa13.41□□□□□ -0.26
CDCA3-206ENST00000536241 CPVLQ9H3G5 476 aa13.41□□□□□ -0.26
CDCA3-206ENST00000536241 ISY1Q9ULR0 285 aaKnown RBP13.41□□□□□ -0.26
CDCA3-206ENST00000536241 JAK2O60674 1132 aa13.4□□□□□ -0.26
CDCA3-206ENST00000536241 BMP3P12645 472 aa13.4□□□□□ -0.26
CDCA3-206ENST00000536241 GNAQP50148 359 aa13.4□□□□□ -0.26
CDCA3-206ENST00000536241 HMGCS2P54868 508 aa13.4□□□□□ -0.26
CDCA3-206ENST00000536241 HUNKP57058 714 aa13.4□□□□□ -0.26
CDCA3-206ENST00000536241 FSTL1Q12841 308 aa13.4□□□□□ -0.26
CDCA3-206ENST00000536241 CPLX2Q6PUV4 134 aaKnown RBP13.4□□□□□ -0.26
CDCA3-206ENST00000536241 NSUN7Q8NE18 718 aaKnown RBP13.4□□□□□ -0.26
CDCA3-206ENST00000536241 DCAF4Q8WV16 495 aa13.4□□□□□ -0.26
CDCA3-206ENST00000536241 PHKBQ93100 1093 aa13.4□□□□□ -0.26
CDCA3-206ENST00000536241 DDX11Q96FC9 970 aa13.4□□□□□ -0.26
CDCA3-206ENST00000536241 GMCL1Q96IK5 515 aa13.4□□□□□ -0.26
CDCA3-206ENST00000536241 LLPHQ9BRT6 129 aaKnown RBP13.4□□□□□ -0.26
CDCA3-206ENST00000536241 VAT1LQ9HCJ6 419 aa13.4□□□□□ -0.26
CDCA3-206ENST00000536241 SMC3Q9UQE7 1217 aa13.4□□□□□ -0.26
CDCA3-206ENST00000536241 TRPM7Q96QT4 1865 aa13.4□□□□□ -0.26
CDCA3-206ENST00000536241 NID2Q14112 1375 aa13.39□□□□□ -0.27
CDCA3-206ENST00000536241 TMEM232C9JQI7 657 aa13.39□□□□□ -0.27
CDCA3-206ENST00000536241 IFNAR1P17181 557 aa13.39□□□□□ -0.27
CDCA3-206ENST00000536241 SLC16A2P36021 539 aa13.39□□□□□ -0.27
CDCA3-206ENST00000536241 GJA5P36382 358 aa13.39□□□□□ -0.27
CDCA3-206ENST00000536241 USP14P54578 494 aa13.39□□□□□ -0.27
CDCA3-206ENST00000536241 FUT2Q10981 343 aa13.39□□□□□ -0.27
CDCA3-206ENST00000536241 SLC35G1Q2M3R5 365 aa13.39□□□□□ -0.27
CDCA3-206ENST00000536241 ASPRV1Q53RT3 343 aa13.39□□□□□ -0.27
CDCA3-206ENST00000536241 FAM83BQ5T0W9 1011 aa13.39□□□□□ -0.27
CDCA3-206ENST00000536241 GPATCH4Q5T3I0 446 aaKnown RBP13.39□□□□□ -0.27
CDCA3-206ENST00000536241 TMTC3Q6ZXV5 915 aa13.39□□□□□ -0.27
CDCA3-206ENST00000536241 SAPCD2Q86UD0 394 aa13.39□□□□□ -0.27
CDCA3-206ENST00000536241 OTOFQ9HC10 1997 aa13.39□□□□□ -0.27
CDCA3-206ENST00000536241 PAPPA2Q9BXP8 1791 aa13.39□□□□□ -0.27
CDCA3-206ENST00000536241 BAZ2BQ9UIF8 2168 aaKnown RBP13.38□□□□□ -0.27
CDCA3-206ENST00000536241 PHIPQ8WWQ0 1821 aa13.38□□□□□ -0.27
CDCA3-206ENST00000536241 hCG_1642624A0A1W2PR95 340 aa13.38□□□□□ -0.27
CDCA3-206ENST00000536241 PTPDC1A2A3K4 754 aa13.38□□□□□ -0.27
CDCA3-206ENST00000536241 CXCL11O14625 94 aa13.38□□□□□ -0.27
CDCA3-206ENST00000536241 CYTH3O43739 400 aa13.38□□□□□ -0.27
CDCA3-206ENST00000536241 FDPSP14324 419 aaKnown RBP13.38□□□□□ -0.27
CDCA3-206ENST00000536241 GJB2P29033 226 aa13.38□□□□□ -0.27
CDCA3-206ENST00000536241 SSRP1Q08945 709 aaKnown RBP13.38□□□□□ -0.27
CDCA3-206ENST00000536241 PPIL2Q13356 520 aa13.38□□□□□ -0.27
CDCA3-206ENST00000536241 SH3D19Q5HYK7 790 aa13.38□□□□□ -0.27
CDCA3-206ENST00000536241 SMARCC2Q8TAQ2 1214 aa13.38□□□□□ -0.27
CDCA3-206ENST00000536241 PIBF1Q8WXW3 757 aa13.38□□□□□ -0.27
CDCA3-206ENST00000536241 LPAR1Q92633 364 aa13.38□□□□□ -0.27
CDCA3-206ENST00000536241 LZTS2Q9BRK4 669 aa13.38□□□□□ -0.27
CDCA3-206ENST00000536241 SLC26A6Q9BXS9 759 aa13.38□□□□□ -0.27
CDCA3-206ENST00000536241 TMOD4Q9NZQ9 345 aa13.38□□□□□ -0.27
CDCA3-206ENST00000536241 V9GY48 417 aaPredicted RBP13.38□□□□□ -0.27
CDCA3-206ENST00000536241 TMEM88BA6NKF7 163 aa13.37□□□□□ -0.27
CDCA3-206ENST00000536241 CDKL5O76039 1030 aa13.37□□□□□ -0.27
CDCA3-206ENST00000536241 SMARCA1P28370 1054 aa13.37□□□□□ -0.27
CDCA3-206ENST00000536241 MKRN3Q13064 507 aaKnown RBP13.37□□□□□ -0.27
CDCA3-206ENST00000536241 WNK4Q96J92 1243 aa13.37□□□□□ -0.27
CDCA3-206ENST00000536241 ORC3Q9UBD5 711 aaPredicted RBP13.37□□□□□ -0.27
CDCA3-206ENST00000536241 KCNH4Q9UQ05 1017 aa13.37□□□□□ -0.27
CDCA3-206ENST00000536241 WDR46O15213 610 aaKnown RBP13.36□□□□□ -0.27
CDCA3-206ENST00000536241 PRPF3O43395 683 aaKnown RBP13.36□□□□□ -0.27
CDCA3-206ENST00000536241 FMNL1O95466 1100 aaPredicted RBP13.36□□□□□ -0.27
CDCA3-206ENST00000536241 VCAM1P19320 739 aa13.36□□□□□ -0.27
CDCA3-206ENST00000536241 ZNF157P51786 506 aaPredicted RBP13.36□□□□□ -0.27
CDCA3-206ENST00000536241 IKQ13123 557 aaPredicted RBP13.36□□□□□ -0.27
CDCA3-206ENST00000536241 ADGRF4Q8IZF3 695 aa13.36□□□□□ -0.27
CDCA3-206ENST00000536241 C12orf42Q96LP6 360 aa13.36□□□□□ -0.27
CDCA3-206ENST00000536241 RPAP3Q9H6T3 665 aaPredicted RBP13.36□□□□□ -0.27
CDCA3-206ENST00000536241 RIOX1Q9H6W3 641 aa13.36□□□□□ -0.27
CDCA3-206ENST00000536241 CWC22Q9HCG8 908 aaKnown RBP13.36□□□□□ -0.27
CDCA3-206ENST00000536241 ABT1Q9ULW3 272 aaKnown RBP13.36□□□□□ -0.27
CDCA3-206ENST00000536241 TLL2Q9Y6L7 1015 aa13.36□□□□□ -0.27
CDCA3-206ENST00000536241 A0A0G2JLL6 359 aaPredicted RBP13.36□□□□□ -0.27
CDCA3-206ENST00000536241 HMGN5P82970 282 aaKnown RBP13.36□□□□□ -0.27
CDCA3-206ENST00000536241 AKAP17AQ02040 695 aaKnown RBP13.36□□□□□ -0.27
CDCA3-206ENST00000536241 SNAPC2Q13487 334 aa13.36□□□□□ -0.27
CDCA3-206ENST00000536241 PKN1Q16512 942 aa13.36□□□□□ -0.27
CDCA3-206ENST00000536241 SPRYD7Q5W111 196 aa13.36□□□□□ -0.27
CDCA3-206ENST00000536241 RGMBQ6NW40 437 aa13.36□□□□□ -0.27
CDCA3-206ENST00000536241 SAMD1Q6SPF0 538 aaPredicted RBP13.36□□□□□ -0.27
CDCA3-206ENST00000536241 BTNL9Q6UXG8 535 aa13.36□□□□□ -0.27
CDCA3-206ENST00000536241 GADL1Q6ZQY3 521 aa13.36□□□□□ -0.27
CDCA3-206ENST00000536241 PRRT2Q7Z6L0 340 aaPredicted RBP13.36□□□□□ -0.27
CDCA3-206ENST00000536241 TRIM22Q8IYM9 498 aa13.36□□□□□ -0.27
CDCA3-206ENST00000536241 FAM184AQ8NB25 1140 aa13.36□□□□□ -0.27
CDCA3-206ENST00000536241 CHURC1Q8WUH1 139 aa13.36□□□□□ -0.27
CDCA3-206ENST00000536241 PIGSQ96S52 555 aa13.36□□□□□ -0.27
CDCA3-206ENST00000536241 SPZ1Q9BXG8 430 aa13.36□□□□□ -0.27
CDCA3-206ENST00000536241 RNF26Q9BY78 433 aaPredicted RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms