RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 ABHD8Q96I13 439 aa6.06□□□□□ -1.44
YBX3-205ENST00000536107 KIRREL1Q96J84 757 aa6.06□□□□□ -1.44
YBX3-205ENST00000536107 DUSP23Q9BVJ7 150 aa6.06□□□□□ -1.44
YBX3-205ENST00000536107 SLC24A1O60721 1099 aa6.05□□□□□ -1.44
YBX3-205ENST00000536107 TMEM253P0C7T8 217 aa6.05□□□□□ -1.44
YBX3-205ENST00000536107 IKZF1Q13422 519 aa6.05□□□□□ -1.44
YBX3-205ENST00000536107 TMEM67Q5HYA8 995 aa6.05□□□□□ -1.44
YBX3-205ENST00000536107 SMYD4Q8IYR2 804 aaPredicted RBP6.05□□□□□ -1.44
YBX3-205ENST00000536107 ATXN3LQ9H3M9 355 aa6.05□□□□□ -1.44
YBX3-205ENST00000536107 PIDD1Q9HB75 910 aa6.05□□□□□ -1.44
YBX3-205ENST00000536107 THRAP3Q9Y2W1 955 aaKnown RBP6.05□□□□□ -1.44
YBX3-205ENST00000536107 KIAA0232Q92628 1395 aa6.05□□□□□ -1.44
YBX3-205ENST00000536107 B3GALT4O96024 378 aa6.04□□□□□ -1.44
YBX3-205ENST00000536107 MED14OSP0DP75 135 aa6.04□□□□□ -1.44
YBX3-205ENST00000536107 PDE3AQ14432 1141 aa6.04□□□□□ -1.44
YBX3-205ENST00000536107 NOM1Q5C9Z4 860 aaKnown RBP6.04□□□□□ -1.44
YBX3-205ENST00000536107 CCNJLQ8IV13 435 aa6.04□□□□□ -1.44
YBX3-205ENST00000536107 STK32AQ8WU08 396 aa6.04□□□□□ -1.44
YBX3-205ENST00000536107 FANCD2OSQ96PS1 177 aa6.04□□□□□ -1.44
YBX3-205ENST00000536107 PRDM10Q9NQV6 1147 aa6.04□□□□□ -1.44
YBX3-205ENST00000536107 TFCP2L1Q9NZI6 479 aa6.04□□□□□ -1.44
YBX3-205ENST00000536107 NRAPQ86VF7 1730 aa6.04□□□□□ -1.44
YBX3-205ENST00000536107 GPRASP1Q5JY77 1395 aa6.04□□□□□ -1.44
YBX3-205ENST00000536107 COL14A1Q05707 1796 aaKnown RBP6.03□□□□□ -1.44
YBX3-205ENST00000536107 NRXN3Q9Y4C0 1643 aa6.03□□□□□ -1.44
YBX3-205ENST00000536107 CDC42BPGQ6DT37 1551 aa6.03□□□□□ -1.44
YBX3-205ENST00000536107 FOXN1O15353 648 aa6.03□□□□□ -1.44
YBX3-205ENST00000536107 ITIH2P19823 946 aa6.03□□□□□ -1.44
YBX3-205ENST00000536107 CTCFP49711 727 aaPredicted RBP6.03□□□□□ -1.44
YBX3-205ENST00000536107 ZNF827Q17R98 1081 aa6.03□□□□□ -1.44
YBX3-205ENST00000536107 CYFIP1Q7L576 1253 aa6.03□□□□□ -1.44
YBX3-205ENST00000536107 WDR90Q96KV7 1748 aa6.02□□□□□ -1.45
YBX3-205ENST00000536107 SSH2Q76I76 1423 aa6.02□□□□□ -1.45
YBX3-205ENST00000536107 ZBTB7CA1YPR0 619 aa6.02□□□□□ -1.45
YBX3-205ENST00000536107 GRIA4P48058 902 aa6.02□□□□□ -1.45
YBX3-205ENST00000536107 SPRED3Q2MJR0 410 aa6.02□□□□□ -1.45
YBX3-205ENST00000536107 ATG14Q6ZNE5 492 aa6.02□□□□□ -1.45
YBX3-205ENST00000536107 SMC1BQ8NDV3 1235 aa6.02□□□□□ -1.45
YBX3-205ENST00000536107 CLP1Q92989 425 aaKnown RBP6.02□□□□□ -1.45
YBX3-205ENST00000536107 HIRIP3Q9BW71 556 aaPredicted RBP6.02□□□□□ -1.45
YBX3-205ENST00000536107 NSUN3Q9H649 340 aaKnown RBP6.02□□□□□ -1.45
YBX3-205ENST00000536107 SEPT3Q9UH03 358 aa6.02□□□□□ -1.45
YBX3-205ENST00000536107 FOXD3Q9UJU5 478 aaPredicted RBP6.02□□□□□ -1.45
YBX3-205ENST00000536107 CD2APQ9Y5K6 639 aa6.02□□□□□ -1.45
YBX3-205ENST00000536107 ID3Q02535 119 aa6.01□□□□□ -1.45
YBX3-205ENST00000536107 EHHADHQ08426 723 aa6.01□□□□□ -1.45
YBX3-205ENST00000536107 AP3B2Q13367 1082 aa6.01□□□□□ -1.45
YBX3-205ENST00000536107 HELQQ8TDG4 1101 aa6.01□□□□□ -1.45
YBX3-205ENST00000536107 HEXIM2Q96MH2 286 aaKnown RBP6.01□□□□□ -1.45
YBX3-205ENST00000536107 DIRC2Q96SL1 478 aa6.01□□□□□ -1.45
YBX3-205ENST00000536107 TCF12Q99081 682 aa6.01□□□□□ -1.45
YBX3-205ENST00000536107 DISC1Q9NRI5 854 aa6.01□□□□□ -1.45
YBX3-205ENST00000536107 PCOLCE2Q9UKZ9 415 aa6.01□□□□□ -1.45
YBX3-205ENST00000536107 CROCC2H7BZ55 1655 aa6.01□□□□□ -1.45
YBX3-205ENST00000536107 TCAF2A6NFQ2 919 aa6□□□□□ -1.45
YBX3-205ENST00000536107 SLFN14P0C7P3 912 aa6□□□□□ -1.45
YBX3-205ENST00000536107 GLDCP23378 1020 aa6□□□□□ -1.45
YBX3-205ENST00000536107 EIF1AXP47813 144 aaKnown RBP6□□□□□ -1.45
YBX3-205ENST00000536107 RGS19P49795 217 aa6□□□□□ -1.45
YBX3-205ENST00000536107 LBX1P52954 281 aa6□□□□□ -1.45
YBX3-205ENST00000536107 SPACA3Q8IXA5 215 aa6□□□□□ -1.45
YBX3-205ENST00000536107 MARCH10Q8NA82 808 aaPredicted RBP6□□□□□ -1.45
YBX3-205ENST00000536107 NGDNQ8NEJ9 315 aaKnown RBP6□□□□□ -1.45
YBX3-205ENST00000536107 PARD6AQ9NPB6 346 aa6□□□□□ -1.45
YBX3-205ENST00000536107 POLIQ9UNA4 740 aa6□□□□□ -1.45
YBX3-205ENST00000536107 KDM2BQ8NHM5 1336 aa5.99□□□□□ -1.45
YBX3-205ENST00000536107 KIF1AQ12756 1690 aa5.99□□□□□ -1.45
YBX3-205ENST00000536107 IGF2BP3O00425 579 aaKnown RBP eCLIP5.99□□□□□ -1.45
YBX3-205ENST00000536107 FOXD2O60548 495 aaPredicted RBP5.99□□□□□ -1.45
YBX3-205ENST00000536107 LIG1P18858 919 aa5.99□□□□□ -1.45
YBX3-205ENST00000536107 FAM214BQ7L5A3 538 aa5.99□□□□□ -1.45
YBX3-205ENST00000536107 WDR89Q96FK6 387 aaPredicted RBP5.99□□□□□ -1.45
YBX3-205ENST00000536107 ACSBG1Q96GR2 724 aa5.99□□□□□ -1.45
YBX3-205ENST00000536107 LIN7BQ9HAP6 207 aa5.99□□□□□ -1.45
YBX3-205ENST00000536107 ZFYVE28Q9HCC9 887 aa5.99□□□□□ -1.45
YBX3-205ENST00000536107 SMG5Q9UPR3 1016 aaKnown RBP5.99□□□□□ -1.45
YBX3-205ENST00000536107 DAPK1P53355 1430 aa5.99□□□□□ -1.45
YBX3-205ENST00000536107 ANKRD50Q9ULJ7 1429 aa5.99□□□□□ -1.45
YBX3-205ENST00000536107 PNPLA7Q6ZV29 1317 aa5.99□□□□□ -1.45
YBX3-205ENST00000536107 IGSF1Q8N6C5 1336 aa5.99□□□□□ -1.45
YBX3-205ENST00000536107 PITPNM2Q9BZ72 1349 aa5.99□□□□□ -1.45
YBX3-205ENST00000536107 NRXN1Q9ULB1 1477 aa5.98□□□□□ -1.45
YBX3-205ENST00000536107 PLEKHH1Q9ULM0 1364 aa5.98□□□□□ -1.45
YBX3-205ENST00000536107 A0A1W2PP55 124 aa5.98□□□□□ -1.45
YBX3-205ENST00000536107 NUAK1O60285 661 aa5.98□□□□□ -1.45
YBX3-205ENST00000536107 RNGTTO60942 597 aaKnown RBP5.98□□□□□ -1.45
YBX3-205ENST00000536107 GDNFP39905 211 aa5.98□□□□□ -1.45
YBX3-205ENST00000536107 SAFB2Q14151 953 aaKnown RBP eCLIP5.98□□□□□ -1.45
YBX3-205ENST00000536107 TTLL4Q14679 1199 aa5.98□□□□□ -1.45
YBX3-205ENST00000536107 TPRNQ4KMQ1 711 aa5.98□□□□□ -1.45
YBX3-205ENST00000536107 ALKBH2Q6NS38 261 aa5.98□□□□□ -1.45
YBX3-205ENST00000536107 TOM1L2Q6ZVM7 507 aa5.98□□□□□ -1.45
YBX3-205ENST00000536107 TOP6BLQ8N6T0 577 aa5.98□□□□□ -1.45
YBX3-205ENST00000536107 EPB41L4BQ9H329 900 aa5.98□□□□□ -1.45
YBX3-205ENST00000536107 ZNF576Q9H609 170 aa5.98□□□□□ -1.45
YBX3-205ENST00000536107 DCP1AQ9NPI6 582 aaPredicted RBP5.98□□□□□ -1.45
YBX3-205ENST00000536107 C19orf73Q9NVV2 129 aa5.98□□□□□ -1.45
YBX3-205ENST00000536107 GTF2IRD1Q9UHL9 959 aa5.98□□□□□ -1.45
YBX3-205ENST00000536107 PCDHGC5Q9Y5F6 944 aa5.98□□□□□ -1.45
YBX3-205ENST00000536107 TULP4Q9NRJ4 1543 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms