RNA–Protein interactions for RNA: ENST00000535941.5

COL21A1-212, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL21A1, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-212ENST00000535941 TSPY8P0CW00 308 aa9.21□□□□□ -0.93
COL21A1-212ENST00000535941 KIF5BP33176 963 aa9.21□□□□□ -0.93
COL21A1-212ENST00000535941 GNAQP50148 359 aa9.21□□□□□ -0.93
COL21A1-212ENST00000535941 SCNN1DP51172 638 aa9.21□□□□□ -0.93
COL21A1-212ENST00000535941 UVSSAQ2YD98 709 aa9.21□□□□□ -0.93
COL21A1-212ENST00000535941 NT5DC1Q5TFE4 455 aa9.21□□□□□ -0.93
COL21A1-212ENST00000535941 TRIM22Q8IYM9 498 aa9.21□□□□□ -0.93
COL21A1-212ENST00000535941 CCDC17Q96LX7 622 aa9.21□□□□□ -0.93
COL21A1-212ENST00000535941 TFIP11Q9UBB9 837 aaKnown RBP9.21□□□□□ -0.93
COL21A1-212ENST00000535941 MRVI1Q9Y6F6 885 aa9.21□□□□□ -0.93
COL21A1-212ENST00000535941 PTPREP23469 700 aa9.21□□□□□ -0.94
COL21A1-212ENST00000535941 JAG1P78504 1218 aa9.21□□□□□ -0.94
COL21A1-212ENST00000535941 RILPL1Q5EBL4 403 aa9.21□□□□□ -0.94
COL21A1-212ENST00000535941 PPP1R18Q6NYC8 613 aa9.21□□□□□ -0.94
COL21A1-212ENST00000535941 AMOTL1Q8IY63 956 aa9.21□□□□□ -0.94
COL21A1-212ENST00000535941 DIS3L2Q8IYB7 885 aaKnown RBP9.21□□□□□ -0.94
COL21A1-212ENST00000535941 SPATA20Q8TB22 786 aa9.21□□□□□ -0.94
COL21A1-212ENST00000535941 POLR2AP24928 1970 aaKnown RBP9.21□□□□□ -0.94
COL21A1-212ENST00000535941 BTBD18B2RXH4 712 aa9.21□□□□□ -0.94
COL21A1-212ENST00000535941 PPIP5K2O43314 1243 aa9.21□□□□□ -0.94
COL21A1-212ENST00000535941 CFAP100Q494V2 611 aa9.21□□□□□ -0.94
COL21A1-212ENST00000535941 ASPRV1Q53RT3 343 aa9.21□□□□□ -0.94
COL21A1-212ENST00000535941 WWC2Q6AWC2 1192 aa9.21□□□□□ -0.94
COL21A1-212ENST00000535941 BTNL9Q6UXG8 535 aa9.21□□□□□ -0.94
COL21A1-212ENST00000535941 TEX2Q8IWB9 1127 aa9.21□□□□□ -0.94
COL21A1-212ENST00000535941 CMTR1Q8N1G2 835 aaKnown RBP9.21□□□□□ -0.94
COL21A1-212ENST00000535941 PRMT6Q96LA8 375 aaPredicted RBP9.21□□□□□ -0.94
COL21A1-212ENST00000535941 KAT14Q9H8E8 782 aa9.21□□□□□ -0.94
COL21A1-212ENST00000535941 ARID2Q68CP9 1835 aa9.2□□□□□ -0.94
COL21A1-212ENST00000535941 SPTLC2O15270 562 aa9.2□□□□□ -0.94
COL21A1-212ENST00000535941 POLR3DP05423 398 aaPredicted RBP9.2□□□□□ -0.94
COL21A1-212ENST00000535941 TERF1P54274 439 aa9.2□□□□□ -0.94
COL21A1-212ENST00000535941 GUCY1B3Q02153 619 aa9.2□□□□□ -0.94
COL21A1-212ENST00000535941 DMTNQ08495 405 aa9.2□□□□□ -0.94
COL21A1-212ENST00000535941 PPP4R3BQ5MIZ7 849 aa9.2□□□□□ -0.94
COL21A1-212ENST00000535941 RASGRP2Q7LDG7 609 aa9.2□□□□□ -0.94
COL21A1-212ENST00000535941 FOXP4Q8IVH2 680 aaPredicted RBP9.2□□□□□ -0.94
COL21A1-212ENST00000535941 CRYGNQ8WXF5 182 aa9.2□□□□□ -0.94
COL21A1-212ENST00000535941 BPIFA3Q9BQP9 254 aa9.2□□□□□ -0.94
COL21A1-212ENST00000535941 PI4KBQ9UBF8 816 aa9.2□□□□□ -0.94
COL21A1-212ENST00000535941 TUBE1Q9UJT0 475 aa9.2□□□□□ -0.94
COL21A1-212ENST00000535941 GOLGB1Q14789 3259 aaKnown RBP9.2□□□□□ -0.94
COL21A1-212ENST00000535941 CUTAO60888 179 aa9.2□□□□□ -0.94
COL21A1-212ENST00000535941 TTLL1O95922 423 aa9.2□□□□□ -0.94
COL21A1-212ENST00000535941 RPS12P25398 132 aaKnown RBP9.2□□□□□ -0.94
COL21A1-212ENST00000535941 KRT2P35908 639 aa9.2□□□□□ -0.94
COL21A1-212ENST00000535941 ATP2C1P98194 919 aaPredicted RBP9.2□□□□□ -0.94
COL21A1-212ENST00000535941 CCDC173Q0VFZ6 552 aa9.2□□□□□ -0.94
COL21A1-212ENST00000535941 ORC2Q13416 577 aaPredicted RBP9.2□□□□□ -0.94
COL21A1-212ENST00000535941 SF3A1Q15459 793 aaKnown RBP9.2□□□□□ -0.94
COL21A1-212ENST00000535941 GMCL1Q96IK5 515 aa9.2□□□□□ -0.94
COL21A1-212ENST00000535941 TEPSINQ96N21 525 aa9.2□□□□□ -0.94
COL21A1-212ENST00000535941 KCNJ14Q9UNX9 436 aa9.2□□□□□ -0.94
COL21A1-212ENST00000535941 SRPRBQ9Y5M8 271 aaKnown RBP9.2□□□□□ -0.94
COL21A1-212ENST00000535941 PLA2G6O60733 806 aa9.2□□□□□ -0.94
COL21A1-212ENST00000535941 ZNF543Q08ER8 600 aa9.2□□□□□ -0.94
COL21A1-212ENST00000535941 NR5A1Q13285 461 aa9.2□□□□□ -0.94
COL21A1-212ENST00000535941 UTP14CQ5TAP6 766 aaKnown RBP9.2□□□□□ -0.94
COL21A1-212ENST00000535941 SH3RF1Q7Z6J0 888 aa9.2□□□□□ -0.94
COL21A1-212ENST00000535941 CTCFLQ8NI51 663 aaPredicted RBP9.2□□□□□ -0.94
COL21A1-212ENST00000535941 FAM151AQ8WW52 585 aa9.2□□□□□ -0.94
COL21A1-212ENST00000535941 TSPY26PQ9H489 355 aa9.2□□□□□ -0.94
COL21A1-212ENST00000535941 HERC5Q9UII4 1024 aaKnown RBP9.2□□□□□ -0.94
COL21A1-212ENST00000535941 PCDHA4Q9UN74 947 aa9.2□□□□□ -0.94
COL21A1-212ENST00000535941 CTAGE5O15320 804 aa9.19□□□□□ -0.94
COL21A1-212ENST00000535941 PPP1R11O60927 126 aaPredicted RBP9.19□□□□□ -0.94
COL21A1-212ENST00000535941 ZNF444Q8N0Y2 327 aaPredicted RBP9.19□□□□□ -0.94
COL21A1-212ENST00000535941 MRPS27Q92552 414 aaKnown RBP9.19□□□□□ -0.94
COL21A1-212ENST00000535941 MKNK2Q9HBH9 465 aa9.19□□□□□ -0.94
COL21A1-212ENST00000535941 DACT1Q9NYF0 836 aa9.19□□□□□ -0.94
COL21A1-212ENST00000535941 ZNF70Q9UC06 446 aaPredicted RBP9.19□□□□□ -0.94
COL21A1-212ENST00000535941 PCDHA6Q9UN73 950 aa9.19□□□□□ -0.94
COL21A1-212ENST00000535941 PCDHA8Q9Y5H6 950 aa9.19□□□□□ -0.94
COL21A1-212ENST00000535941 PHF20L1A8MW92 1017 aa9.19□□□□□ -0.94
COL21A1-212ENST00000535941 PPFIA3O75145 1194 aa9.19□□□□□ -0.94
COL21A1-212ENST00000535941 NDUFA8P51970 172 aa9.19□□□□□ -0.94
COL21A1-212ENST00000535941 IL17AQ16552 155 aa9.19□□□□□ -0.94
COL21A1-212ENST00000535941 NOM1Q5C9Z4 860 aaKnown RBP9.19□□□□□ -0.94
COL21A1-212ENST00000535941 DALRD3Q5D0E6 543 aaKnown RBP9.19□□□□□ -0.94
COL21A1-212ENST00000535941 KIAA0825Q8IV33 1275 aa9.19□□□□□ -0.94
COL21A1-212ENST00000535941 CCAR1Q8IX12 1150 aaKnown RBP9.19□□□□□ -0.94
COL21A1-212ENST00000535941 DCAF4Q8WV16 495 aa9.19□□□□□ -0.94
COL21A1-212ENST00000535941 TMX4Q9H1E5 349 aaPredicted RBP9.19□□□□□ -0.94
COL21A1-212ENST00000535941 DEFB129Q9H1M3 183 aa9.19□□□□□ -0.94
COL21A1-212ENST00000535941 ZNF277Q9NRM2 450 aaPredicted RBP9.19□□□□□ -0.94
COL21A1-212ENST00000535941 VPS54Q9P1Q0 977 aa9.19□□□□□ -0.94
COL21A1-212ENST00000535941 V9GY48 417 aaPredicted RBP9.19□□□□□ -0.94
COL21A1-212ENST00000535941 BAZ2BQ9UIF8 2168 aaKnown RBP9.19□□□□□ -0.94
COL21A1-212ENST00000535941 SIP14410 1827 aa9.18□□□□□ -0.94
COL21A1-212ENST00000535941 FAM205CA6NFA0 338 aa9.18□□□□□ -0.94
COL21A1-212ENST00000535941 SARSP49591 514 aaKnown RBP9.18□□□□□ -0.94
COL21A1-212ENST00000535941 CXCL9Q07325 125 aa9.18□□□□□ -0.94
COL21A1-212ENST00000535941 CNPY4Q8N129 248 aa9.18□□□□□ -0.94
COL21A1-212ENST00000535941 ATF5Q9Y2D1 282 aaPredicted RBP9.18□□□□□ -0.94
COL21A1-212ENST00000535941 PCDHB6Q9Y5E3 794 aa9.18□□□□□ -0.94
COL21A1-212ENST00000535941 USP17L5A8MUK1 530 aa9.18□□□□□ -0.94
COL21A1-212ENST00000535941 GHRHRQ02643 423 aa9.18□□□□□ -0.94
COL21A1-212ENST00000535941 IQCB1Q15051 598 aa9.18□□□□□ -0.94
COL21A1-212ENST00000535941 FOXD4L6Q3SYB3 417 aaPredicted RBP9.18□□□□□ -0.94
COL21A1-212ENST00000535941 FOXD4L3Q6VB84 417 aaPredicted RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms