RNA–Protein interactions for RNA: ENST00000535927.5

VAMP1-205, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 578 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-205ENST00000535927 ECE1P42892 770 aa18.91■□□□□ 0.62
VAMP1-205ENST00000535927 RTN1Q16799 776 aa18.91■□□□□ 0.62
VAMP1-205ENST00000535927 SHROOM1Q2M3G4 852 aaPredicted RBP18.91■□□□□ 0.62
VAMP1-205ENST00000535927 FAM160B2Q86V87 743 aa18.91■□□□□ 0.62
VAMP1-205ENST00000535927 OTUD5Q96G74 571 aa18.91■□□□□ 0.62
VAMP1-205ENST00000535927 ZCCHC17Q9NP64 241 aaKnown RBP18.91■□□□□ 0.62
VAMP1-205ENST00000535927 GPHNQ9NQX3 736 aaPredicted RBP18.91■□□□□ 0.62
VAMP1-205ENST00000535927 FEM1BQ9UK73 627 aa18.91■□□□□ 0.62
VAMP1-205ENST00000535927 PNMA2Q9UL42 364 aa18.91■□□□□ 0.62
VAMP1-205ENST00000535927 ABT1Q9ULW3 272 aaKnown RBP18.91■□□□□ 0.62
VAMP1-205ENST00000535927 SLC45A1Q9Y2W3 748 aa18.91■□□□□ 0.62
VAMP1-205ENST00000535927 MANSC4A6NHS7 340 aaPredicted RBP18.9■□□□□ 0.62
VAMP1-205ENST00000535927 TRIM75PA6NK02 468 aa18.9■□□□□ 0.62
VAMP1-205ENST00000535927 RASSF10A6NK89 507 aa18.9■□□□□ 0.62
VAMP1-205ENST00000535927 GOLGA8AA7E2F4 631 aa18.9■□□□□ 0.62
VAMP1-205ENST00000535927 GOLGA8BA8MQT2 603 aa18.9■□□□□ 0.62
VAMP1-205ENST00000535927 HOXA7P31268 230 aaPredicted RBP18.9■□□□□ 0.62
VAMP1-205ENST00000535927 ZNF543Q08ER8 600 aa18.9■□□□□ 0.62
VAMP1-205ENST00000535927 MTMR2Q13614 643 aa18.9■□□□□ 0.62
VAMP1-205ENST00000535927 ME3Q16798 604 aa18.9■□□□□ 0.62
VAMP1-205ENST00000535927 BTNL9Q6UXG8 535 aa18.9■□□□□ 0.62
VAMP1-205ENST00000535927 LRRC47Q8N1G4 583 aaKnown RBP18.9■□□□□ 0.62
VAMP1-205ENST00000535927 NUP133Q8WUM0 1156 aa18.9■□□□□ 0.62
VAMP1-205ENST00000535927 INTS4Q96HW7 963 aaKnown RBP18.9■□□□□ 0.62
VAMP1-205ENST00000535927 TMX3Q96JJ7 454 aa18.9■□□□□ 0.62
VAMP1-205ENST00000535927 SENP2Q9HC62 589 aa18.9■□□□□ 0.62
VAMP1-205ENST00000535927 HPS5Q9UPZ3 1129 aa18.9■□□□□ 0.62
VAMP1-205ENST00000535927 RBM19Q9Y4C8 960 aaKnown RBP18.9■□□□□ 0.62
VAMP1-205ENST00000535927 MYPNQ86TC9 1320 aa18.9■□□□□ 0.62
VAMP1-205ENST00000535927 PTPRFP10586 1907 aa18.9■□□□□ 0.62
VAMP1-205ENST00000535927 CPLX1O14810 134 aa18.89■□□□□ 0.61
VAMP1-205ENST00000535927 SLC10A3P09131 477 aa18.89■□□□□ 0.61
VAMP1-205ENST00000535927 PDIA4P13667 645 aaKnown RBP18.89■□□□□ 0.61
VAMP1-205ENST00000535927 TRAF1Q13077 416 aa18.89■□□□□ 0.61
VAMP1-205ENST00000535927 MICU3Q86XE3 530 aa18.89■□□□□ 0.61
VAMP1-205ENST00000535927 GTF3C6Q969F1 213 aa18.89■□□□□ 0.61
VAMP1-205ENST00000535927 EMILIN3Q9NT22 766 aa18.89■□□□□ 0.61
VAMP1-205ENST00000535927 NAP1L2Q9ULW6 460 aaPredicted RBP18.89■□□□□ 0.61
VAMP1-205ENST00000535927 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.89■□□□□ 0.61
VAMP1-205ENST00000535927 TESPA1A2RU30 521 aaPredicted RBP18.88■□□□□ 0.61
VAMP1-205ENST00000535927 USP17L15C9J2P7 530 aa18.88■□□□□ 0.61
VAMP1-205ENST00000535927 USP17L13C9JLJ4 530 aa18.88■□□□□ 0.61
VAMP1-205ENST00000535927 USP17L11C9JVI0 530 aa18.88■□□□□ 0.61
VAMP1-205ENST00000535927 USP17L18D6R9N7 530 aa18.88■□□□□ 0.61
VAMP1-205ENST00000535927 USP17L22D6RA61 530 aa18.88■□□□□ 0.61
VAMP1-205ENST00000535927 USP17L17D6RBQ6 530 aa18.88■□□□□ 0.61
VAMP1-205ENST00000535927 USP17L19D6RCP7 530 aa18.88■□□□□ 0.61
VAMP1-205ENST00000535927 USP17L20D6RJB6 530 aa18.88■□□□□ 0.61
VAMP1-205ENST00000535927 VEGFBP49765 207 aa18.88■□□□□ 0.61
VAMP1-205ENST00000535927 USP17L24Q0WX57 530 aa18.88■□□□□ 0.61
VAMP1-205ENST00000535927 CUL4AQ13619 759 aa18.88■□□□□ 0.61
VAMP1-205ENST00000535927 DEFB115Q30KQ5 88 aa18.88■□□□□ 0.61
VAMP1-205ENST00000535927 RASAL3Q86YV0 1011 aa18.88■□□□□ 0.61
VAMP1-205ENST00000535927 CLEC10AQ8IUN9 316 aa18.88■□□□□ 0.61
VAMP1-205ENST00000535927 FAM177A1Q8N128 213 aaPredicted RBP18.88■□□□□ 0.61
VAMP1-205ENST00000535927 RGS22Q8NE09 1264 aa18.88■□□□□ 0.61
VAMP1-205ENST00000535927 SPZ1Q9BXG8 430 aa18.88■□□□□ 0.61
VAMP1-205ENST00000535927 HOXC10Q9NYD6 342 aa18.88■□□□□ 0.61
VAMP1-205ENST00000535927 MAD2L2Q9UI95 211 aa18.88■□□□□ 0.61
VAMP1-205ENST00000535927 KIF3AQ9Y496 699 aa18.88■□□□□ 0.61
VAMP1-205ENST00000535927 KLRF2D3W0D1 207 aa18.87■□□□□ 0.61
VAMP1-205ENST00000535927 IFNAR1P17181 557 aa18.87■□□□□ 0.61
VAMP1-205ENST00000535927 HMGCS2P54868 508 aa18.87■□□□□ 0.61
VAMP1-205ENST00000535927 OTUD7BQ6GQQ9 843 aa18.87■□□□□ 0.61
VAMP1-205ENST00000535927 PRPF38AQ8NAV1 312 aaKnown RBP18.87■□□□□ 0.61
VAMP1-205ENST00000535927 GTF3C2Q8WUA4 911 aaPredicted RBP18.87■□□□□ 0.61
VAMP1-205ENST00000535927 MS4A4AQ96JQ5 239 aa18.87■□□□□ 0.61
VAMP1-205ENST00000535927 AGTPBP1Q9UPW5 1226 aa18.87■□□□□ 0.61
VAMP1-205ENST00000535927 VCAM1P19320 739 aa18.86■□□□□ 0.61
VAMP1-205ENST00000535927 STAT2P52630 851 aa18.86■□□□□ 0.61
VAMP1-205ENST00000535927 HMGN5P82970 282 aaKnown RBP18.86■□□□□ 0.61
VAMP1-205ENST00000535927 SREBF2Q12772 1141 aa18.86■□□□□ 0.61
VAMP1-205ENST00000535927 NOGQ13253 232 aa18.86■□□□□ 0.61
VAMP1-205ENST00000535927 CCDC96Q2M329 555 aa18.86■□□□□ 0.61
VAMP1-205ENST00000535927 CATSPERGQ6ZRH7 1159 aa18.86■□□□□ 0.61
VAMP1-205ENST00000535927 TMTC3Q6ZXV5 915 aa18.86■□□□□ 0.61
VAMP1-205ENST00000535927 TRIM22Q8IYM9 498 aa18.86■□□□□ 0.61
VAMP1-205ENST00000535927 RIOX1Q9H6W3 641 aa18.86■□□□□ 0.61
VAMP1-205ENST00000535927 FAM217BQ9NTX9 383 aaPredicted RBP18.86■□□□□ 0.61
VAMP1-205ENST00000535927 PNMA3Q9UL41 463 aa18.86■□□□□ 0.61
VAMP1-205ENST00000535927 RAD21O60216 631 aa18.85■□□□□ 0.61
VAMP1-205ENST00000535927 CD2BP2O95400 341 aaKnown RBP18.85■□□□□ 0.61
VAMP1-205ENST00000535927 OSBPP22059 807 aa18.85■□□□□ 0.61
VAMP1-205ENST00000535927 LBX1P52954 281 aa18.85■□□□□ 0.61
VAMP1-205ENST00000535927 SCRN1Q12765 414 aa18.85■□□□□ 0.61
VAMP1-205ENST00000535927 COG2Q14746 738 aa18.85■□□□□ 0.61
VAMP1-205ENST00000535927 ANKRD23Q86SG2 305 aa18.85■□□□□ 0.61
VAMP1-205ENST00000535927 CCDC84Q86UT8 332 aaPredicted RBP18.85■□□□□ 0.61
VAMP1-205ENST00000535927 TEX2Q8IWB9 1127 aa18.85■□□□□ 0.61
VAMP1-205ENST00000535927 WASF1Q92558 559 aa18.85■□□□□ 0.61
VAMP1-205ENST00000535927 RNF26Q9BY78 433 aaPredicted RBP18.85■□□□□ 0.61
VAMP1-205ENST00000535927 WBP1LQ9NX94 342 aa18.85■□□□□ 0.61
VAMP1-205ENST00000535927 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.85■□□□□ 0.61
VAMP1-205ENST00000535927 DAXXQ9UER7 740 aaPredicted RBP18.85■□□□□ 0.61
VAMP1-205ENST00000535927 LOC285556D6RIA3 1793 aa18.85■□□□□ 0.61
VAMP1-205ENST00000535927 TMEM232C9JQI7 657 aa18.84■□□□□ 0.61
VAMP1-205ENST00000535927 GJA5P36382 358 aa18.84■□□□□ 0.61
VAMP1-205ENST00000535927 MAP2K2P36507 400 aa18.84■□□□□ 0.61
VAMP1-205ENST00000535927 CCT2P78371 535 aaKnown RBP18.84■□□□□ 0.61
VAMP1-205ENST00000535927 AKAP17AQ02040 695 aaKnown RBP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms