RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 JAKMIP1Q96N16 626 aaKnown RBP14.16□□□□□ -0.14
CHD4-203ENST00000535717 KAT14Q9H8E8 782 aa14.16□□□□□ -0.14
CHD4-203ENST00000535717 GPHNQ9NQX3 736 aaPredicted RBP14.16□□□□□ -0.14
CHD4-203ENST00000535717 FBXO28Q9NVF7 368 aa14.16□□□□□ -0.14
CHD4-203ENST00000535717 MTMR7Q9Y216 660 aa14.16□□□□□ -0.14
CHD4-203ENST00000535717 RLFQ13129 1914 aa14.15□□□□□ -0.14
CHD4-203ENST00000535717 ERICH2A1L162 156 aa14.15□□□□□ -0.14
CHD4-203ENST00000535717 SPDYE16A6NNV3 312 aaPredicted RBP14.15□□□□□ -0.14
CHD4-203ENST00000535717 FLOT1O75955 427 aa14.15□□□□□ -0.14
CHD4-203ENST00000535717 BCRP11274 1271 aa14.15□□□□□ -0.14
CHD4-203ENST00000535717 BMP3P12645 472 aa14.15□□□□□ -0.14
CHD4-203ENST00000535717 CPA1P15085 419 aa14.15□□□□□ -0.14
CHD4-203ENST00000535717 SLC1A4P43007 532 aa14.15□□□□□ -0.14
CHD4-203ENST00000535717 WTAPQ15007 396 aa14.15□□□□□ -0.14
CHD4-203ENST00000535717 SART3Q15020 963 aaKnown RBP14.15□□□□□ -0.14
CHD4-203ENST00000535717 NOM1Q5C9Z4 860 aaKnown RBP14.15□□□□□ -0.14
CHD4-203ENST00000535717 DHX32Q7L7V1 743 aaKnown RBP14.15□□□□□ -0.14
CHD4-203ENST00000535717 DCAF4Q8WV16 495 aa14.15□□□□□ -0.14
CHD4-203ENST00000535717 TMEM87BQ96K49 555 aa14.15□□□□□ -0.14
CHD4-203ENST00000535717 MTA3Q9BTC8 594 aa14.15□□□□□ -0.14
CHD4-203ENST00000535717 LRRC2Q9BYS8 371 aa14.15□□□□□ -0.14
CHD4-203ENST00000535717 LY9Q9HBG7 655 aa14.15□□□□□ -0.14
CHD4-203ENST00000535717 WDR19Q8NEZ3 1342 aa14.15□□□□□ -0.15
CHD4-203ENST00000535717 SH2B2O14492 632 aaPredicted RBP14.14□□□□□ -0.15
CHD4-203ENST00000535717 PEX10O60683 326 aa14.14□□□□□ -0.15
CHD4-203ENST00000535717 HMGB1P09429 215 aaKnown RBP14.14□□□□□ -0.15
CHD4-203ENST00000535717 SNHG28P0DPA3 235 aa14.14□□□□□ -0.15
CHD4-203ENST00000535717 PDHBP11177 359 aa14.14□□□□□ -0.15
CHD4-203ENST00000535717 DSG3P32926 999 aa14.14□□□□□ -0.15
CHD4-203ENST00000535717 GCLCP48506 637 aaPredicted RBP14.14□□□□□ -0.15
CHD4-203ENST00000535717 LBX2Q6XYB7 198 aa14.14□□□□□ -0.15
CHD4-203ENST00000535717 KCTD1Q719H9 257 aa14.14□□□□□ -0.15
CHD4-203ENST00000535717 ANKRD13CQ8N6S4 541 aa14.14□□□□□ -0.15
CHD4-203ENST00000535717 ZNF296Q8WUU4 475 aaPredicted RBP14.14□□□□□ -0.15
CHD4-203ENST00000535717 TCEANC2Q96MN5 208 aa14.14□□□□□ -0.15
CHD4-203ENST00000535717 HOXC10Q9NYD6 342 aa14.14□□□□□ -0.15
CHD4-203ENST00000535717 RBPJLQ9UBG7 517 aa14.14□□□□□ -0.15
CHD4-203ENST00000535717 PARP14Q460N5 1801 aa14.13□□□□□ -0.15
CHD4-203ENST00000535717 TMEM232C9JQI7 657 aa14.13□□□□□ -0.15
CHD4-203ENST00000535717 FKTNO75072 461 aa14.13□□□□□ -0.15
CHD4-203ENST00000535717 CASTP20810 708 aaKnown RBP14.13□□□□□ -0.15
CHD4-203ENST00000535717 PSMA5P28066 241 aa14.13□□□□□ -0.15
CHD4-203ENST00000535717 SP3Q02447 781 aa14.13□□□□□ -0.15
CHD4-203ENST00000535717 CCDC96Q2M329 555 aa14.13□□□□□ -0.15
CHD4-203ENST00000535717 BLOC1S2Q6QNY1 142 aa14.13□□□□□ -0.15
CHD4-203ENST00000535717 SAMD1Q6SPF0 538 aaPredicted RBP14.13□□□□□ -0.15
CHD4-203ENST00000535717 ATG4CQ96DT6 458 aa14.13□□□□□ -0.15
CHD4-203ENST00000535717 SLF1Q9BQI6 1058 aa14.13□□□□□ -0.15
CHD4-203ENST00000535717 TXNRD2Q9NNW7 524 aa14.13□□□□□ -0.15
CHD4-203ENST00000535717 FEM1BQ9UK73 627 aa14.13□□□□□ -0.15
CHD4-203ENST00000535717 PPP1R9AQ9ULJ8 1098 aa14.13□□□□□ -0.15
CHD4-203ENST00000535717 ISY1Q9ULR0 285 aaKnown RBP14.13□□□□□ -0.15
CHD4-203ENST00000535717 FRMPD2Q68DX3 1309 aaPredicted RBP14.13□□□□□ -0.15
CHD4-203ENST00000535717 MYPNQ86TC9 1320 aa14.13□□□□□ -0.15
CHD4-203ENST00000535717 CNMDO75829 334 aa14.12□□□□□ -0.15
CHD4-203ENST00000535717 RPS6KB1P23443 525 aa14.12□□□□□ -0.15
CHD4-203ENST00000535717 LIFRP42702 1097 aa14.12□□□□□ -0.15
CHD4-203ENST00000535717 ANAPC15P60006 121 aa14.12□□□□□ -0.15
CHD4-203ENST00000535717 ZNF543Q08ER8 600 aa14.12□□□□□ -0.15
CHD4-203ENST00000535717 FAM110CQ1W6H9 321 aa14.12□□□□□ -0.15
CHD4-203ENST00000535717 TTBK2Q6IQ55 1244 aa14.12□□□□□ -0.15
CHD4-203ENST00000535717 PRPF38AQ8NAV1 312 aaKnown RBP14.12□□□□□ -0.15
CHD4-203ENST00000535717 GTF3C2Q8WUA4 911 aaPredicted RBP14.12□□□□□ -0.15
CHD4-203ENST00000535717 PAGR1Q9BTK6 254 aa14.12□□□□□ -0.15
CHD4-203ENST00000535717 TM6SF1Q9BZW5 370 aa14.12□□□□□ -0.15
CHD4-203ENST00000535717 ZSWIM6Q9HCJ5 1215 aa14.12□□□□□ -0.15
CHD4-203ENST00000535717 GPCPD1Q9NPB8 672 aa14.12□□□□□ -0.15
CHD4-203ENST00000535717 BTBD7Q9P203 1132 aa14.12□□□□□ -0.15
CHD4-203ENST00000535717 MORF4L1Q9UBU8 362 aa14.12□□□□□ -0.15
CHD4-203ENST00000535717 ADAMTS5Q9UNA0 930 aa14.12□□□□□ -0.15
CHD4-203ENST00000535717 RABGAP1Q9Y3P9 1069 aa14.12□□□□□ -0.15
CHD4-203ENST00000535717 CASP8AP2Q9UKL3 1982 aa14.11□□□□□ -0.15
CHD4-203ENST00000535717 VWA5AO00534 786 aa14.11□□□□□ -0.15
CHD4-203ENST00000535717 PLA2G6O60733 806 aa14.11□□□□□ -0.15
CHD4-203ENST00000535717 GOLGA8HP0CJ92 632 aa14.11□□□□□ -0.15
CHD4-203ENST00000535717 STAT2P52630 851 aa14.11□□□□□ -0.15
CHD4-203ENST00000535717 CAP1Q01518 475 aa14.11□□□□□ -0.15
CHD4-203ENST00000535717 TROAPQ12815 778 aa14.11□□□□□ -0.15
CHD4-203ENST00000535717 Q3C1V9 767 aa14.11□□□□□ -0.15
CHD4-203ENST00000535717 NFXL1Q6ZNB6 911 aa14.11□□□□□ -0.15
CHD4-203ENST00000535717 RUFY3Q7L099 469 aa14.11□□□□□ -0.15
CHD4-203ENST00000535717 CATIPQ7Z7H3 387 aa14.11□□□□□ -0.15
CHD4-203ENST00000535717 TMTC2Q8N394 836 aa14.11□□□□□ -0.15
CHD4-203ENST00000535717 CHURC1Q8WUH1 139 aa14.11□□□□□ -0.15
CHD4-203ENST00000535717 KIFC2Q96AC6 838 aa14.11□□□□□ -0.15
CHD4-203ENST00000535717 IL17RAQ96F46 866 aa14.11□□□□□ -0.15
CHD4-203ENST00000535717 A0A0G2JMZ2 1700 aa14.1□□□□□ -0.15
CHD4-203ENST00000535717 CCDC69A6NI79 296 aa14.1□□□□□ -0.15
CHD4-203ENST00000535717 CTGFP29279 349 aa14.1□□□□□ -0.15
CHD4-203ENST00000535717 SLC16A2P36021 539 aa14.1□□□□□ -0.15
CHD4-203ENST00000535717 ERVK-9P63128 1117 aa14.1□□□□□ -0.15
CHD4-203ENST00000535717 ERVK-24P63145 666 aa14.1□□□□□ -0.15
CHD4-203ENST00000535717 LACTBP83111 547 aaPredicted RBP14.1□□□□□ -0.15
CHD4-203ENST00000535717 IKQ13123 557 aaPredicted RBP14.1□□□□□ -0.15
CHD4-203ENST00000535717 GPATCH4Q5T3I0 446 aaKnown RBP14.1□□□□□ -0.15
CHD4-203ENST00000535717 BTNL9Q6UXG8 535 aa14.1□□□□□ -0.15
CHD4-203ENST00000535717 Q6ZUG5 572 aa14.1□□□□□ -0.15
CHD4-203ENST00000535717 FAM160B2Q86V87 743 aa14.1□□□□□ -0.15
CHD4-203ENST00000535717 SGMS1Q86VZ5 419 aa14.1□□□□□ -0.15
CHD4-203ENST00000535717 ZNF654Q8IZM8 581 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms