RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 CLCN6P51797 869 aa12.93□□□□□ -0.34
CCDC60-202ENST00000535685 ICA1Q05084 483 aa12.93□□□□□ -0.34
CCDC60-202ENST00000535685 TSHZ3Q63HK5 1081 aa12.93□□□□□ -0.34
CCDC60-202ENST00000535685 MB21D1Q8N884 522 aa12.93□□□□□ -0.34
CCDC60-202ENST00000535685 ANKLE1Q8NAG6 615 aa12.93□□□□□ -0.34
CCDC60-202ENST00000535685 TRIB2Q92519 343 aa12.93□□□□□ -0.34
CCDC60-202ENST00000535685 VCPKMTQ9H867 229 aa12.93□□□□□ -0.34
CCDC60-202ENST00000535685 STAP2Q9UGK3 403 aa12.93□□□□□ -0.34
CCDC60-202ENST00000535685 ALPK3Q96L96 1907 aa12.92□□□□□ -0.34
CCDC60-202ENST00000535685 SLC15A5A6NIM6 579 aa12.92□□□□□ -0.34
CCDC60-202ENST00000535685 PATL2C9JE40 543 aaKnown RBP12.92□□□□□ -0.34
CCDC60-202ENST00000535685 SMIM22K7EJ46 135 aa12.92□□□□□ -0.34
CCDC60-202ENST00000535685 WDR46O15213 610 aaKnown RBP12.92□□□□□ -0.34
CCDC60-202ENST00000535685 GPAA1O43292 621 aa12.92□□□□□ -0.34
CCDC60-202ENST00000535685 PEX10O60683 326 aa12.92□□□□□ -0.34
CCDC60-202ENST00000535685 HOXC6P09630 235 aa12.92□□□□□ -0.34
CCDC60-202ENST00000535685 RGS2P41220 211 aa12.92□□□□□ -0.34
CCDC60-202ENST00000535685 SHCBP1Q8NEM2 672 aa12.92□□□□□ -0.34
CCDC60-202ENST00000535685 APBA2Q99767 749 aa12.92□□□□□ -0.34
CCDC60-202ENST00000535685 PAGR1Q9BTK6 254 aa12.92□□□□□ -0.34
CCDC60-202ENST00000535685 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.92□□□□□ -0.34
CCDC60-202ENST00000535685 HMX1Q9NP08 348 aaPredicted RBP12.92□□□□□ -0.34
CCDC60-202ENST00000535685 BTBD7Q9P203 1132 aa12.92□□□□□ -0.34
CCDC60-202ENST00000535685 ADAMTS5Q9UNA0 930 aa12.92□□□□□ -0.34
CCDC60-202ENST00000535685 STRNO43815 780 aa12.91□□□□□ -0.34
CCDC60-202ENST00000535685 FARP2O94887 1054 aaPredicted RBP12.91□□□□□ -0.34
CCDC60-202ENST00000535685 IGHA2P01877 340 aa12.91□□□□□ -0.34
CCDC60-202ENST00000535685 CYP2B6P20813 491 aa12.91□□□□□ -0.34
CCDC60-202ENST00000535685 PTPREP23469 700 aa12.91□□□□□ -0.34
CCDC60-202ENST00000535685 MAP2K5Q13163 448 aa12.91□□□□□ -0.34
CCDC60-202ENST00000535685 KIAA1755Q5JYT7 1200 aa12.91□□□□□ -0.34
CCDC60-202ENST00000535685 ZMYM1Q5SVZ6 1142 aa12.91□□□□□ -0.34
CCDC60-202ENST00000535685 CCAR1Q8IX12 1150 aaKnown RBP12.91□□□□□ -0.34
CCDC60-202ENST00000535685 OTUD7AQ8TE49 926 aaPredicted RBP12.91□□□□□ -0.34
CCDC60-202ENST00000535685 DEFB118Q96PH6 123 aa12.91□□□□□ -0.34
CCDC60-202ENST00000535685 HTATIP2Q9BUP3 242 aa12.91□□□□□ -0.34
CCDC60-202ENST00000535685 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.91□□□□□ -0.34
CCDC60-202ENST00000535685 EPB41L4AQ9HCS5 686 aaPredicted RBP12.91□□□□□ -0.34
CCDC60-202ENST00000535685 SYNPO2Q9UMS6 1093 aa12.91□□□□□ -0.34
CCDC60-202ENST00000535685 FRMPD3Q5JV73 1810 aa12.9□□□□□ -0.34
CCDC60-202ENST00000535685 SMCHD1A6NHR9 2005 aa12.9□□□□□ -0.34
CCDC60-202ENST00000535685 M0R2C6 588 aa12.9□□□□□ -0.34
CCDC60-202ENST00000535685 TFRCP02786 760 aaKnown RBP12.9□□□□□ -0.34
CCDC60-202ENST00000535685 EEF2P13639 858 aaKnown RBP12.9□□□□□ -0.34
CCDC60-202ENST00000535685 RASA1P20936 1047 aa12.9□□□□□ -0.34
CCDC60-202ENST00000535685 GRB14Q14449 540 aa12.9□□□□□ -0.34
CCDC60-202ENST00000535685 ANKRD45Q5TZF3 282 aa12.9□□□□□ -0.34
CCDC60-202ENST00000535685 ZNF287Q9HBT7 754 aa12.9□□□□□ -0.34
CCDC60-202ENST00000535685 NYAP2Q9P242 653 aa12.9□□□□□ -0.34
CCDC60-202ENST00000535685 OGDHLQ9ULD0 1010 aa12.9□□□□□ -0.34
CCDC60-202ENST00000535685 IGKV6D-41A0A0C4DH26 115 aa12.89□□□□□ -0.35
CCDC60-202ENST00000535685 ZKSCAN1P17029 563 aaPredicted RBP12.89□□□□□ -0.35
CCDC60-202ENST00000535685 PDE1AP54750 535 aa12.89□□□□□ -0.35
CCDC60-202ENST00000535685 TRIM32Q13049 653 aa12.89□□□□□ -0.35
CCDC60-202ENST00000535685 CAMK2BQ13554 666 aa12.89□□□□□ -0.35
CCDC60-202ENST00000535685 SMC5Q8IY18 1101 aa12.89□□□□□ -0.35
CCDC60-202ENST00000535685 IFNL3Q8IZI9 196 aa12.89□□□□□ -0.35
CCDC60-202ENST00000535685 ABRAQ8N0Z2 381 aa12.89□□□□□ -0.35
CCDC60-202ENST00000535685 MKL1Q969V6 931 aa12.89□□□□□ -0.35
CCDC60-202ENST00000535685 EVI5LQ96CN4 794 aa12.89□□□□□ -0.35
CCDC60-202ENST00000535685 FSD1Q9BTV5 496 aa12.89□□□□□ -0.35
CCDC60-202ENST00000535685 MOV10L1Q9BXT6 1211 aaKnown RBP12.89□□□□□ -0.35
CCDC60-202ENST00000535685 NACAP1Q9BZK3 213 aa12.89□□□□□ -0.35
CCDC60-202ENST00000535685 TANGO6Q9C0B7 1094 aa12.89□□□□□ -0.35
CCDC60-202ENST00000535685 SPATC1LQ9H0A9 340 aa12.89□□□□□ -0.35
CCDC60-202ENST00000535685 GOPCQ9HD26 462 aa12.89□□□□□ -0.35
CCDC60-202ENST00000535685 ARIH1Q9Y4X5 557 aaPredicted RBP12.89□□□□□ -0.35
CCDC60-202ENST00000535685 IVNS1ABPQ9Y6Y0 642 aa12.89□□□□□ -0.35
CCDC60-202ENST00000535685 PLXNA1Q9UIW2 1896 aa12.89□□□□□ -0.35
CCDC60-202ENST00000535685 CACNB2Q08289 660 aaPredicted RBP12.88□□□□□ -0.35
CCDC60-202ENST00000535685 CLEC10AQ8IUN9 316 aa12.88□□□□□ -0.35
CCDC60-202ENST00000535685 MROH8Q9H579 483 aa12.88□□□□□ -0.35
CCDC60-202ENST00000535685 MKNK2Q9HBH9 465 aa12.88□□□□□ -0.35
CCDC60-202ENST00000535685 PLIN4Q96Q06 1357 aa12.88□□□□□ -0.35
CCDC60-202ENST00000535685 MINDY4BA8MYZ0 360 aa12.87□□□□□ -0.35
CCDC60-202ENST00000535685 FLOT1O75955 427 aa12.87□□□□□ -0.35
CCDC60-202ENST00000535685 SLC25A27O95847 323 aa12.87□□□□□ -0.35
CCDC60-202ENST00000535685 TDO2P48775 406 aa12.87□□□□□ -0.35
CCDC60-202ENST00000535685 CCL14Q16627 93 aa12.87□□□□□ -0.35
CCDC60-202ENST00000535685 PPP1R15BQ5SWA1 713 aa12.87□□□□□ -0.35
CCDC60-202ENST00000535685 OLFML2BQ68BL8 750 aa12.87□□□□□ -0.35
CCDC60-202ENST00000535685 NECAB2Q7Z6G3 386 aa12.87□□□□□ -0.35
CCDC60-202ENST00000535685 SEC62Q99442 399 aaKnown RBP12.87□□□□□ -0.35
CCDC60-202ENST00000535685 RWDD1Q9H446 243 aaPredicted RBP12.87□□□□□ -0.35
CCDC60-202ENST00000535685 CWC22Q9HCG8 908 aaKnown RBP12.87□□□□□ -0.35
CCDC60-202ENST00000535685 GPHNQ9NQX3 736 aaPredicted RBP12.87□□□□□ -0.35
CCDC60-202ENST00000535685 H0YGN5 161 aa12.86□□□□□ -0.35
CCDC60-202ENST00000535685 FOXP2O15409 715 aa12.86□□□□□ -0.35
CCDC60-202ENST00000535685 APPP05067 770 aa12.86□□□□□ -0.35
CCDC60-202ENST00000535685 ERCC3P19447 782 aa12.86□□□□□ -0.35
CCDC60-202ENST00000535685 COPB2P35606 906 aa12.86□□□□□ -0.35
CCDC60-202ENST00000535685 PDE4BQ07343 736 aa12.86□□□□□ -0.35
CCDC60-202ENST00000535685 ALX1Q15699 326 aa12.86□□□□□ -0.35
CCDC60-202ENST00000535685 HABP4Q5JVS0 413 aaKnown RBP12.86□□□□□ -0.35
CCDC60-202ENST00000535685 MFSD14CQ5VZR4 134 aa12.86□□□□□ -0.35
CCDC60-202ENST00000535685 LHX8Q68G74 356 aa12.86□□□□□ -0.35
CCDC60-202ENST00000535685 ZNF444Q8N0Y2 327 aaPredicted RBP12.86□□□□□ -0.35
CCDC60-202ENST00000535685 SPICE1Q8N0Z3 855 aa12.86□□□□□ -0.35
CCDC60-202ENST00000535685 REPS2Q8NFH8 660 aa12.86□□□□□ -0.35
CCDC60-202ENST00000535685 NEDD1Q8NHV4 660 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms