RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 TSPYL5Q86VY4 417 aaPredicted RBP5.91□□□□□ -1.46
USP48-215ENST00000534705 ANKS4BQ8N8V4 417 aa5.91□□□□□ -1.46
USP48-215ENST00000534705 KBTBD4Q9NVX7 518 aa5.91□□□□□ -1.46
USP48-215ENST00000534705 ADAM30Q9UKF2 790 aa5.91□□□□□ -1.46
USP48-215ENST00000534705 KCNH3Q9ULD8 1083 aa5.91□□□□□ -1.46
USP48-215ENST00000534705 ROBO2Q9HCK4 1378 aa5.91□□□□□ -1.46
USP48-215ENST00000534705 OR14I1A6ND48 311 aa5.9□□□□□ -1.46
USP48-215ENST00000534705 HRKO00198 91 aa5.9□□□□□ -1.46
USP48-215ENST00000534705 PI3P19957 117 aa5.9□□□□□ -1.46
USP48-215ENST00000534705 ZNF76P36508 570 aa5.9□□□□□ -1.46
USP48-215ENST00000534705 FANCCQ00597 558 aa5.9□□□□□ -1.46
USP48-215ENST00000534705 PDE4BQ07343 736 aa5.9□□□□□ -1.46
USP48-215ENST00000534705 MPP2Q14168 576 aa5.9□□□□□ -1.46
USP48-215ENST00000534705 SPATS1Q496A3 300 aa5.9□□□□□ -1.46
USP48-215ENST00000534705 TIGD5Q53EQ6 642 aa5.9□□□□□ -1.46
USP48-215ENST00000534705 SLC6A19Q695T7 634 aa5.9□□□□□ -1.46
USP48-215ENST00000534705 MRPL41Q8IXM3 137 aaKnown RBP5.9□□□□□ -1.46
USP48-215ENST00000534705 SP8Q8IXZ3 490 aa5.9□□□□□ -1.46
USP48-215ENST00000534705 TMEM87AQ8NBN3 555 aa5.9□□□□□ -1.46
USP48-215ENST00000534705 PPP1R13LQ8WUF5 828 aa5.9□□□□□ -1.46
USP48-215ENST00000534705 DACT3Q96B18 629 aaPredicted RBP5.9□□□□□ -1.46
USP48-215ENST00000534705 Q96M66 194 aa5.9□□□□□ -1.46
USP48-215ENST00000534705 BACH2Q9BYV9 841 aa5.9□□□□□ -1.46
USP48-215ENST00000534705 GGT7Q9UJ14 662 aa5.9□□□□□ -1.46
USP48-215ENST00000534705 GPR160Q9UJ42 338 aa5.9□□□□□ -1.46
USP48-215ENST00000534705 PRR36Q9H6K5 1346 aa5.9□□□□□ -1.47
USP48-215ENST00000534705 F13A1P00488 732 aa5.89□□□□□ -1.47
USP48-215ENST00000534705 LTKP29376 864 aa5.89□□□□□ -1.47
USP48-215ENST00000534705 CDK8P49336 464 aa5.89□□□□□ -1.47
USP48-215ENST00000534705 BNC2Q6ZN30 1099 aaPredicted RBP5.89□□□□□ -1.47
USP48-215ENST00000534705 FAM196AQ6ZSG2 479 aa5.89□□□□□ -1.47
USP48-215ENST00000534705 SIRT5Q9NXA8 310 aa5.89□□□□□ -1.47
USP48-215ENST00000534705 CEP131Q9UPN4 1083 aa5.89□□□□□ -1.47
USP48-215ENST00000534705 SUPT16HQ9Y5B9 1047 aaKnown RBP5.89□□□□□ -1.47
USP48-215ENST00000534705 SCAMP3O14828 347 aaKnown RBP5.88□□□□□ -1.47
USP48-215ENST00000534705 GREM1O60565 184 aa5.88□□□□□ -1.47
USP48-215ENST00000534705 EIF4A3P38919 411 aaKnown RBP5.88□□□□□ -1.47
USP48-215ENST00000534705 SRSF3P84103 164 aaKnown RBP5.88□□□□□ -1.47
USP48-215ENST00000534705 TMEM201Q5SNT2 666 aa5.88□□□□□ -1.47
USP48-215ENST00000534705 GOLM1Q8NBJ4 401 aa5.88□□□□□ -1.47
USP48-215ENST00000534705 JARID2Q92833 1246 aaPredicted RBP5.88□□□□□ -1.47
USP48-215ENST00000534705 TEPSINQ96N21 525 aa5.88□□□□□ -1.47
USP48-215ENST00000534705 COPRSQ9NQ92 184 aa5.88□□□□□ -1.47
USP48-215ENST00000534705 UNC13AQ9UPW8 1703 aa5.88□□□□□ -1.47
USP48-215ENST00000534705 ADAMTS20P59510 1910 aa5.87□□□□□ -1.47
USP48-215ENST00000534705 ZC3H12DA2A288 527 aaKnown RBP5.87□□□□□ -1.47
USP48-215ENST00000534705 F6X3S4 739 aa5.87□□□□□ -1.47
USP48-215ENST00000534705 FEZF2Q8TBJ5 459 aa5.87□□□□□ -1.47
USP48-215ENST00000534705 PANK1Q8TE04 598 aa5.87□□□□□ -1.47
USP48-215ENST00000534705 RNF34Q969K3 372 aa5.87□□□□□ -1.47
USP48-215ENST00000534705 MRRFQ96E11 262 aaKnown RBP5.87□□□□□ -1.47
USP48-215ENST00000534705 MBD1Q9UIS9 605 aaPredicted RBP5.87□□□□□ -1.47
USP48-215ENST00000534705 PCDHA11Q9Y5I1 949 aa5.87□□□□□ -1.47
USP48-215ENST00000534705 SLC22A31A6NKX4 558 aa5.86□□□□□ -1.47
USP48-215ENST00000534705 MINDY4BA8MYZ0 360 aa5.86□□□□□ -1.47
USP48-215ENST00000534705 PGRP06401 933 aa5.86□□□□□ -1.47
USP48-215ENST00000534705 FAM160A1Q05DH4 1040 aa5.86□□□□□ -1.47
USP48-215ENST00000534705 CWF19L2Q2TBE0 894 aaKnown RBP5.86□□□□□ -1.47
USP48-215ENST00000534705 OLFML2BQ68BL8 750 aa5.86□□□□□ -1.47
USP48-215ENST00000534705 FBXL19Q6PCT2 694 aa5.86□□□□□ -1.47
USP48-215ENST00000534705 REC114Q7Z4M0 266 aa5.86□□□□□ -1.47
USP48-215ENST00000534705 DNAJB8Q8NHS0 232 aa5.86□□□□□ -1.47
USP48-215ENST00000534705 SHISA4Q96DD7 197 aa5.86□□□□□ -1.47
USP48-215ENST00000534705 TMEM87BQ96K49 555 aa5.86□□□□□ -1.47
USP48-215ENST00000534705 KRTAP9-8Q9BYQ0 159 aa5.86□□□□□ -1.47
USP48-215ENST00000534705 KIAA1522Q9P206 1035 aaPredicted RBP5.86□□□□□ -1.47
USP48-215ENST00000534705 TJP2Q9UDY2 1190 aa5.86□□□□□ -1.47
USP48-215ENST00000534705 ADAMTS1Q9UHI8 967 aa5.86□□□□□ -1.47
USP48-215ENST00000534705 UNCXA6NJT0 531 aa5.85□□□□□ -1.47
USP48-215ENST00000534705 N4BP3O15049 544 aa5.85□□□□□ -1.47
USP48-215ENST00000534705 PSPNO60542 156 aa5.85□□□□□ -1.47
USP48-215ENST00000534705 EFEMP1Q12805 493 aa5.85□□□□□ -1.47
USP48-215ENST00000534705 MCATQ8IVS2 390 aaKnown RBP5.85□□□□□ -1.47
USP48-215ENST00000534705 ZDHHC14Q8IZN3 488 aa5.85□□□□□ -1.47
USP48-215ENST00000534705 DTWD2Q8NBA8 298 aa5.85□□□□□ -1.47
USP48-215ENST00000534705 ZNF296Q8WUU4 475 aaPredicted RBP5.85□□□□□ -1.47
USP48-215ENST00000534705 ACSF2Q96CM8 615 aaPredicted RBP5.85□□□□□ -1.47
USP48-215ENST00000534705 NT5C1AQ9BXI3 368 aa5.85□□□□□ -1.47
USP48-215ENST00000534705 LUC7LQ9NQ29 371 aaKnown RBP5.85□□□□□ -1.47
USP48-215ENST00000534705 POLR3KQ9Y2Y1 108 aaPredicted RBP5.85□□□□□ -1.47
USP48-215ENST00000534705 ATE1O95260 518 aa5.84□□□□□ -1.47
USP48-215ENST00000534705 PLP2Q04941 152 aa5.84□□□□□ -1.47
USP48-215ENST00000534705 ADGRF1Q5T601 910 aa5.84□□□□□ -1.47
USP48-215ENST00000534705 FRMD5Q7Z6J6 570 aa5.84□□□□□ -1.47
USP48-215ENST00000534705 USP48Q86UV5 1035 aa5.84□□□□□ -1.47
USP48-215ENST00000534705 KIAA0825Q8IV33 1275 aa5.84□□□□□ -1.47
USP48-215ENST00000534705 SLFN12Q8IYM2 578 aa5.84□□□□□ -1.47
USP48-215ENST00000534705 CRTAC1Q9NQ79 661 aa5.84□□□□□ -1.47
USP48-215ENST00000534705 MYRFQ9Y2G1 1151 aa5.84□□□□□ -1.47
USP48-215ENST00000534705 ABLIM1O14639 778 aa5.83□□□□□ -1.48
USP48-215ENST00000534705 HTR3BO95264 441 aa5.83□□□□□ -1.48
USP48-215ENST00000534705 PLCG1P19174 1290 aa5.83□□□□□ -1.48
USP48-215ENST00000534705 YARSP54577 528 aaKnown RBP5.83□□□□□ -1.48
USP48-215ENST00000534705 NLRX1Q86UT6 975 aa5.83□□□□□ -1.48
USP48-215ENST00000534705 METTL16Q86W50 562 aaKnown RBP5.83□□□□□ -1.48
USP48-215ENST00000534705 REXO1Q8N1G1 1221 aaKnown RBP5.83□□□□□ -1.48
USP48-215ENST00000534705 FBXO27Q8NI29 283 aa5.83□□□□□ -1.48
USP48-215ENST00000534705 CYB5D2Q8WUJ1 264 aa5.83□□□□□ -1.48
USP48-215ENST00000534705 LINC01599Q8WXQ3 324 aa5.83□□□□□ -1.48
USP48-215ENST00000534705 DPH2Q9BQC3 489 aaPredicted RBP5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms