RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 SPATS2Q86XZ4 545 aaKnown RBP21.56■■□□□ 1.04
SMPD1-210ENST00000534405 TUBE1Q9UJT0 475 aa21.56■■□□□ 1.04
SMPD1-210ENST00000534405 DOT1LQ8TEK3 1739 aa21.55■■□□□ 1.04
SMPD1-210ENST00000534405 PNOCQ13519 176 aa21.55■■□□□ 1.04
SMPD1-210ENST00000534405 RRP12Q5JTH9 1297 aaKnown RBP21.55■■□□□ 1.04
SMPD1-210ENST00000534405 B4GALNT4Q76KP1 1039 aa21.55■■□□□ 1.04
SMPD1-210ENST00000534405 CALR3Q96L12 384 aaKnown RBP21.55■■□□□ 1.04
SMPD1-210ENST00000534405 DESI2Q9BSY9 194 aa21.55■■□□□ 1.04
SMPD1-210ENST00000534405 INTS13Q9NVM9 706 aa21.55■■□□□ 1.04
SMPD1-210ENST00000534405 KIF5CO60282 957 aa21.55■■□□□ 1.04
SMPD1-210ENST00000534405 NBPF9Q3BBW0 867 aa21.55■■□□□ 1.04
SMPD1-210ENST00000534405 TIAM2Q8IVF5 1701 aa21.54■■□□□ 1.04
SMPD1-210ENST00000534405 COL4A1P02462 1669 aa21.54■■□□□ 1.04
SMPD1-210ENST00000534405 COL14A1Q05707 1796 aaKnown RBP21.54■■□□□ 1.04
SMPD1-210ENST00000534405 FAM237AA0A1B0GTK4 181 aa21.54■■□□□ 1.04
SMPD1-210ENST00000534405 RESP18Q5W5W9 173 aa21.54■■□□□ 1.04
SMPD1-210ENST00000534405 MIGA1Q8NAN2 632 aa21.54■■□□□ 1.04
SMPD1-210ENST00000534405 CAPS2Q9BXY5 557 aa21.54■■□□□ 1.04
SMPD1-210ENST00000534405 FMNL1O95466 1100 aaPredicted RBP21.54■■□□□ 1.04
SMPD1-210ENST00000534405 CRKLP46109 303 aaKnown RBP21.54■■□□□ 1.04
SMPD1-210ENST00000534405 SSRP1Q08945 709 aaKnown RBP21.54■■□□□ 1.04
SMPD1-210ENST00000534405 MFSD6Q6ZSS7 791 aa21.54■■□□□ 1.04
SMPD1-210ENST00000534405 SLC4A4Q9Y6R1 1079 aa21.54■■□□□ 1.04
SMPD1-210ENST00000534405 STK36Q9NRP7 1315 aa21.53■■□□□ 1.04
SMPD1-210ENST00000534405 A0A0G2JS52 829 aa21.53■■□□□ 1.04
SMPD1-210ENST00000534405 BTBD18B2RXH4 712 aa21.53■■□□□ 1.04
SMPD1-210ENST00000534405 IFNAR1P17181 557 aa21.53■■□□□ 1.04
SMPD1-210ENST00000534405 STIM1Q13586 685 aa21.53■■□□□ 1.04
SMPD1-210ENST00000534405 TRIM29Q14134 588 aa21.53■■□□□ 1.04
SMPD1-210ENST00000534405 CMTR1Q8N1G2 835 aaKnown RBP21.53■■□□□ 1.04
SMPD1-210ENST00000534405 OTUD6BQ8N6M0 293 aa21.53■■□□□ 1.04
SMPD1-210ENST00000534405 COG1Q8WTW3 980 aa21.53■■□□□ 1.04
SMPD1-210ENST00000534405 CCDC87Q9NVE4 849 aa21.53■■□□□ 1.04
SMPD1-210ENST00000534405 PLCH1Q4KWH8 1693 aa21.53■■□□□ 1.04
SMPD1-210ENST00000534405 CTAGE9A4FU28 777 aa21.53■■□□□ 1.04
SMPD1-210ENST00000534405 MEFVO15553 781 aaPredicted RBP21.53■■□□□ 1.04
SMPD1-210ENST00000534405 KIAA0754O94854 1291 aa21.53■■□□□ 1.04
SMPD1-210ENST00000534405 CAMTA2O94983 1202 aa21.53■■□□□ 1.04
SMPD1-210ENST00000534405 ARHGAP25P42331 645 aa21.53■■□□□ 1.04
SMPD1-210ENST00000534405 LONRF3Q496Y0 759 aa21.53■■□□□ 1.04
SMPD1-210ENST00000534405 METTL16Q86W50 562 aaKnown RBP21.53■■□□□ 1.04
SMPD1-210ENST00000534405 FOXP4Q8IVH2 680 aaPredicted RBP21.53■■□□□ 1.04
SMPD1-210ENST00000534405 TATDN2Q93075 761 aa21.53■■□□□ 1.04
SMPD1-210ENST00000534405 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.53■■□□□ 1.04
SMPD1-210ENST00000534405 KLC4Q9NSK0 619 aa21.53■■□□□ 1.04
SMPD1-210ENST00000534405 KCNJ14Q9UNX9 436 aa21.53■■□□□ 1.04
SMPD1-210ENST00000534405 SMIM22K7EJ46 135 aa21.52■■□□□ 1.04
SMPD1-210ENST00000534405 MCM3P25205 808 aa21.52■■□□□ 1.04
SMPD1-210ENST00000534405 GGCXP38435 758 aa21.52■■□□□ 1.04
SMPD1-210ENST00000534405 TOB1P50616 345 aaPredicted RBP21.52■■□□□ 1.04
SMPD1-210ENST00000534405 SMTNP53814 917 aa21.52■■□□□ 1.04
SMPD1-210ENST00000534405 SPECC1Q5M775 1068 aa21.52■■□□□ 1.04
SMPD1-210ENST00000534405 CCDC82Q8N4S0 544 aa21.52■■□□□ 1.04
SMPD1-210ENST00000534405 RIN2Q8WYP3 895 aaPredicted RBP21.52■■□□□ 1.04
SMPD1-210ENST00000534405 CNNM2Q9H8M5 875 aa21.52■■□□□ 1.04
SMPD1-210ENST00000534405 FANCLQ9NW38 375 aa21.52■■□□□ 1.04
SMPD1-210ENST00000534405 IQSEC3Q9UPP2 1182 aaPredicted RBP21.52■■□□□ 1.04
SMPD1-210ENST00000534405 A0A1B0GUA9 196 aa21.51■■□□□ 1.03
SMPD1-210ENST00000534405 GOLGA6CA6NDK9 693 aa21.51■■□□□ 1.03
SMPD1-210ENST00000534405 GOLGA6DP0CG33 693 aa21.51■■□□□ 1.03
SMPD1-210ENST00000534405 YTHDF3Q7Z739 585 aaKnown RBP21.51■■□□□ 1.03
SMPD1-210ENST00000534405 ADGRA1Q86SQ6 560 aa21.51■■□□□ 1.03
SMPD1-210ENST00000534405 PDILTQ8N807 584 aa21.51■■□□□ 1.03
SMPD1-210ENST00000534405 NOA1Q8NC60 698 aaKnown RBP21.51■■□□□ 1.03
SMPD1-210ENST00000534405 ACSBG1Q96GR2 724 aa21.51■■□□□ 1.03
SMPD1-210ENST00000534405 KRT23Q9C075 422 aa21.51■■□□□ 1.03
SMPD1-210ENST00000534405 GOLGA6AQ9NYA3 693 aa21.51■■□□□ 1.03
SMPD1-210ENST00000534405 BCORQ6W2J9 1755 aa21.51■■□□□ 1.03
SMPD1-210ENST00000534405 GRIN1Q05586 938 aa21.51■■□□□ 1.03
SMPD1-210ENST00000534405 ADCY2Q08462 1091 aa21.51■■□□□ 1.03
SMPD1-210ENST00000534405 PTPN21Q16825 1174 aa21.51■■□□□ 1.03
SMPD1-210ENST00000534405 NOSTRINQ8IVI9 506 aa21.51■■□□□ 1.03
SMPD1-210ENST00000534405 ZNF483Q8TF39 744 aaPredicted RBP21.51■■□□□ 1.03
SMPD1-210ENST00000534405 EHD4Q9H223 541 aa21.51■■□□□ 1.03
SMPD1-210ENST00000534405 PNPLA7Q6ZV29 1317 aa21.51■■□□□ 1.03
SMPD1-210ENST00000534405 COL16A1Q07092 1604 aaPredicted RBP21.51■■□□□ 1.03
SMPD1-210ENST00000534405 NID2Q14112 1375 aa21.51■■□□□ 1.03
SMPD1-210ENST00000534405 WTIPA6NIX2 430 aaPredicted RBP21.5■■□□□ 1.03
SMPD1-210ENST00000534405 AGPSO00116 658 aa21.5■■□□□ 1.03
SMPD1-210ENST00000534405 FOXN1O15353 648 aa21.5■■□□□ 1.03
SMPD1-210ENST00000534405 RASSF9O75901 435 aa21.5■■□□□ 1.03
SMPD1-210ENST00000534405 NTSR2O95665 410 aa21.5■■□□□ 1.03
SMPD1-210ENST00000534405 MMP1P03956 469 aa21.5■■□□□ 1.03
SMPD1-210ENST00000534405 CCNHP51946 323 aaPredicted RBP21.5■■□□□ 1.03
SMPD1-210ENST00000534405 ADKP55263 362 aaKnown RBP21.5■■□□□ 1.03
SMPD1-210ENST00000534405 SF3B2Q13435 895 aaKnown RBP21.5■■□□□ 1.03
SMPD1-210ENST00000534405 ITPK1Q13572 414 aa21.5■■□□□ 1.03
SMPD1-210ENST00000534405 LZTFL1Q9NQ48 299 aa21.5■■□□□ 1.03
SMPD1-210ENST00000534405 CHRNDQ07001 517 aa21.5■■□□□ 1.03
SMPD1-210ENST00000534405 PLCB4Q15147 1175 aa21.5■■□□□ 1.03
SMPD1-210ENST00000534405 SPECC1LQ69YQ0 1117 aa21.5■■□□□ 1.03
SMPD1-210ENST00000534405 ADGRG1Q9Y653 693 aa21.5■■□□□ 1.03
SMPD1-210ENST00000534405 PHLPP1O60346 1717 aa21.49■■□□□ 1.03
SMPD1-210ENST00000534405 GNGT1P63211 74 aa21.49■■□□□ 1.03
SMPD1-210ENST00000534405 ICA1Q05084 483 aa21.49■■□□□ 1.03
SMPD1-210ENST00000534405 WTAPQ15007 396 aa21.49■■□□□ 1.03
SMPD1-210ENST00000534405 RTN1Q16799 776 aa21.49■■□□□ 1.03
SMPD1-210ENST00000534405 CCDC152Q4G0S7 254 aa21.49■■□□□ 1.03
SMPD1-210ENST00000534405 ZNF569Q5MCW4 686 aa21.49■■□□□ 1.03
SMPD1-210ENST00000534405 DIS3L2Q8IYB7 885 aaKnown RBP21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 125 ms