RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 EPB41L4AQ9HCS5 686 aaPredicted RBP10.65□□□□□ -0.71
COPB1-211ENST00000534234 FBXO28Q9NVF7 368 aa10.65□□□□□ -0.71
COPB1-211ENST00000534234 NYAP2Q9P242 653 aa10.65□□□□□ -0.71
COPB1-211ENST00000534234 ADAMTS5Q9UNA0 930 aa10.65□□□□□ -0.71
COPB1-211ENST00000534234 DDX60LQ5H9U9 1706 aaKnown RBP10.64□□□□□ -0.71
COPB1-211ENST00000534234 F5H6K3 240 aa10.64□□□□□ -0.71
COPB1-211ENST00000534234 COBLO75128 1261 aa10.64□□□□□ -0.71
COPB1-211ENST00000534234 PRDM1O75626 825 aa10.64□□□□□ -0.71
COPB1-211ENST00000534234 SLC25A27O95847 323 aa10.64□□□□□ -0.71
COPB1-211ENST00000534234 KLRC3Q07444 240 aa10.64□□□□□ -0.71
COPB1-211ENST00000534234 ZMYM1Q5SVZ6 1142 aa10.64□□□□□ -0.71
COPB1-211ENST00000534234 FAM83BQ5T0W9 1011 aa10.64□□□□□ -0.71
COPB1-211ENST00000534234 PRO3102Q9H379 93 aa10.64□□□□□ -0.71
COPB1-211ENST00000534234 SLC5A4Q9NY91 659 aa10.64□□□□□ -0.71
COPB1-211ENST00000534234 CLIP2Q9UDT6 1046 aa10.64□□□□□ -0.71
COPB1-211ENST00000534234 STAP2Q9UGK3 403 aa10.64□□□□□ -0.71
COPB1-211ENST00000534234 VWA5AO00534 786 aa10.63□□□□□ -0.71
COPB1-211ENST00000534234 IGHA2P01877 340 aa10.63□□□□□ -0.71
COPB1-211ENST00000534234 COL6A1P12109 1028 aa10.63□□□□□ -0.71
COPB1-211ENST00000534234 FCER1AP12319 257 aa10.63□□□□□ -0.71
COPB1-211ENST00000534234 STAT3P40763 770 aa10.63□□□□□ -0.71
COPB1-211ENST00000534234 OLFML2BQ68BL8 750 aa10.63□□□□□ -0.71
COPB1-211ENST00000534234 C7orf61Q8IZ16 206 aa10.63□□□□□ -0.71
COPB1-211ENST00000534234 ABRAQ8N0Z2 381 aa10.63□□□□□ -0.71
COPB1-211ENST00000534234 DDX20Q9UHI6 824 aaKnown RBP10.63□□□□□ -0.71
COPB1-211ENST00000534234 PPP1R9AQ9ULJ8 1098 aa10.63□□□□□ -0.71
COPB1-211ENST00000534234 PFASO15067 1338 aa10.63□□□□□ -0.71
COPB1-211ENST00000534234 DOCK3Q8IZD9 2030 aa10.62□□□□□ -0.71
COPB1-211ENST00000534234 MSCO60682 206 aa10.62□□□□□ -0.71
COPB1-211ENST00000534234 PDE4BQ07343 736 aa10.62□□□□□ -0.71
COPB1-211ENST00000534234 RIOX2Q8IUF8 465 aa10.62□□□□□ -0.71
COPB1-211ENST00000534234 TRPV1Q8NER1 839 aa10.62□□□□□ -0.71
COPB1-211ENST00000534234 NUP88Q99567 741 aaPredicted RBP10.62□□□□□ -0.71
COPB1-211ENST00000534234 NAPBQ9H115 298 aa10.62□□□□□ -0.71
COPB1-211ENST00000534234 ZMYND8Q9ULU4 1186 aaPredicted RBP10.62□□□□□ -0.71
COPB1-211ENST00000534234 NAV1Q8NEY1 1877 aa10.62□□□□□ -0.71
COPB1-211ENST00000534234 SALL3Q9BXA9 1300 aa10.62□□□□□ -0.71
COPB1-211ENST00000534234 ROBO3Q96MS0 1386 aa10.61□□□□□ -0.71
COPB1-211ENST00000534234 IGKV6D-41A0A0C4DH26 115 aa10.61□□□□□ -0.71
COPB1-211ENST00000534234 NDUFB10O96000 172 aa10.61□□□□□ -0.71
COPB1-211ENST00000534234 SLC3A2P08195 630 aaKnown RBP10.61□□□□□ -0.71
COPB1-211ENST00000534234 CYBAP13498 195 aa10.61□□□□□ -0.71
COPB1-211ENST00000534234 PDE1AP54750 535 aa10.61□□□□□ -0.71
COPB1-211ENST00000534234 HDAC1Q13547 482 aaPredicted RBP10.61□□□□□ -0.71
COPB1-211ENST00000534234 PRPF38AQ8NAV1 312 aaKnown RBP10.61□□□□□ -0.71
COPB1-211ENST00000534234 MKL1Q969V6 931 aa10.61□□□□□ -0.71
COPB1-211ENST00000534234 EVI5LQ96CN4 794 aa10.61□□□□□ -0.71
COPB1-211ENST00000534234 CEP95Q96GE4 821 aa10.61□□□□□ -0.71
COPB1-211ENST00000534234 SLF1Q9BQI6 1058 aa10.61□□□□□ -0.71
COPB1-211ENST00000534234 MTMR4Q9NYA4 1195 aa10.61□□□□□ -0.71
COPB1-211ENST00000534234 ZNF214Q9UL59 606 aaPredicted RBP10.61□□□□□ -0.71
COPB1-211ENST00000534234 PLXNB2O15031 1838 aa10.61□□□□□ -0.71
COPB1-211ENST00000534234 TTLL1O95922 423 aa10.6□□□□□ -0.71
COPB1-211ENST00000534234 PGK2P07205 417 aa10.6□□□□□ -0.71
COPB1-211ENST00000534234 TSPY3P0CV98 308 aa10.6□□□□□ -0.71
COPB1-211ENST00000534234 TSPY8P0CW00 308 aa10.6□□□□□ -0.71
COPB1-211ENST00000534234 SYN1P17600 705 aa10.6□□□□□ -0.71
COPB1-211ENST00000534234 TFAP4Q01664 338 aa10.6□□□□□ -0.71
COPB1-211ENST00000534234 PPARAQ07869 468 aa10.6□□□□□ -0.71
COPB1-211ENST00000534234 KCTD2Q14681 263 aa10.6□□□□□ -0.71
COPB1-211ENST00000534234 FAM47AQ5JRC9 791 aa10.6□□□□□ -0.71
COPB1-211ENST00000534234 PRAMEF19Q5SWL8 479 aa10.6□□□□□ -0.71
COPB1-211ENST00000534234 CCDC129Q6ZRS4 1044 aa10.6□□□□□ -0.71
COPB1-211ENST00000534234 REPS2Q8NFH8 660 aa10.6□□□□□ -0.71
COPB1-211ENST00000534234 NEDD1Q8NHV4 660 aa10.6□□□□□ -0.71
COPB1-211ENST00000534234 MAML3Q96JK9 1138 aa10.6□□□□□ -0.71
COPB1-211ENST00000534234 MMP19Q99542 508 aa10.6□□□□□ -0.71
COPB1-211ENST00000534234 GDF15Q99988 308 aa10.6□□□□□ -0.71
COPB1-211ENST00000534234 SENP6Q9GZR1 1112 aaPredicted RBP10.6□□□□□ -0.71
COPB1-211ENST00000534234 A0A1W2PPC1 479 aa10.6□□□□□ -0.71
COPB1-211ENST00000534234 SEPT4O43236 478 aa10.6□□□□□ -0.71
COPB1-211ENST00000534234 ZBED4O75132 1171 aa10.6□□□□□ -0.71
COPB1-211ENST00000534234 COPB2P35606 906 aa10.6□□□□□ -0.71
COPB1-211ENST00000534234 AAMPQ13685 434 aa10.6□□□□□ -0.71
COPB1-211ENST00000534234 LRRC26Q2I0M4 334 aa10.6□□□□□ -0.71
COPB1-211ENST00000534234 ANO1Q5XXA6 986 aa10.6□□□□□ -0.71
COPB1-211ENST00000534234 ARRDC4Q8NCT1 418 aa10.6□□□□□ -0.71
COPB1-211ENST00000534234 CTDP1Q9Y5B0 961 aaPredicted RBP10.6□□□□□ -0.71
COPB1-211ENST00000534234 DNM1LO00429 736 aa10.59□□□□□ -0.71
COPB1-211ENST00000534234 BMP8BP34820 402 aa10.59□□□□□ -0.71
COPB1-211ENST00000534234 SLC4A3P48751 1232 aa10.59□□□□□ -0.71
COPB1-211ENST00000534234 ZNF792Q3KQV3 632 aa10.59□□□□□ -0.71
COPB1-211ENST00000534234 GJC2Q5T442 439 aaPredicted RBP10.59□□□□□ -0.71
COPB1-211ENST00000534234 SNRNP48Q6IEG0 339 aaKnown RBP10.59□□□□□ -0.71
COPB1-211ENST00000534234 CPXCR1Q8N123 301 aa10.59□□□□□ -0.71
COPB1-211ENST00000534234 KIFC2Q96AC6 838 aa10.59□□□□□ -0.71
COPB1-211ENST00000534234 TINF2Q9BSI4 451 aa10.59□□□□□ -0.71
COPB1-211ENST00000534234 TEX13BQ9BXU2 312 aa10.59□□□□□ -0.71
COPB1-211ENST00000534234 RWDD1Q9H446 243 aaPredicted RBP10.59□□□□□ -0.71
COPB1-211ENST00000534234 INCENPQ9NQS7 918 aa10.59□□□□□ -0.71
COPB1-211ENST00000534234 HELLSQ9NRZ9 838 aa10.59□□□□□ -0.71
COPB1-211ENST00000534234 SYNPO2Q9UMS6 1093 aa10.59□□□□□ -0.71
COPB1-211ENST00000534234 DIS3Q9Y2L1 958 aaKnown RBP10.59□□□□□ -0.71
COPB1-211ENST00000534234 RIPK3Q9Y572 518 aa10.59□□□□□ -0.71
COPB1-211ENST00000534234 CEP290O15078 2479 aa10.59□□□□□ -0.71
COPB1-211ENST00000534234 ATP2A1O14983 1001 aa10.58□□□□□ -0.72
COPB1-211ENST00000534234 FOXP2O15409 715 aa10.58□□□□□ -0.72
COPB1-211ENST00000534234 MYCNP04198 464 aaPredicted RBP10.58□□□□□ -0.72
COPB1-211ENST00000534234 BMP3P12645 472 aa10.58□□□□□ -0.72
COPB1-211ENST00000534234 MAGEA10P43363 369 aaPredicted RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms