RNA–Protein interactions for RNA: ENST00000534172.1

CSMD3-210, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 5

Gene CSMD3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-210ENST00000534172 ZSWIM4Q9H7M6 989 aa5.04□□□□□ -1.6
CSMD3-210ENST00000534172 LRRC4CQ9HCJ2 640 aa5.04□□□□□ -1.6
CSMD3-210ENST00000534172 DISP3Q9P2K9 1392 aa5.04□□□□□ -1.6
CSMD3-210ENST00000534172 CBX7O95931 251 aa5.04□□□□□ -1.6
CSMD3-210ENST00000534172 NBPF9Q3BBW0 867 aa5.04□□□□□ -1.6
CSMD3-210ENST00000534172 LARP1BQ659C4 914 aaKnown RBP5.04□□□□□ -1.6
CSMD3-210ENST00000534172 RIN3Q8TB24 985 aa5.04□□□□□ -1.6
CSMD3-210ENST00000534172 ASB11Q8WXH4 323 aa5.04□□□□□ -1.6
CSMD3-210ENST00000534172 HEXIM2Q96MH2 286 aaKnown RBP5.04□□□□□ -1.6
CSMD3-210ENST00000534172 BSDC1Q9NW68 430 aaPredicted RBP5.04□□□□□ -1.6
CSMD3-210ENST00000534172 ANKRD34BA5PLL1 514 aa5.03□□□□□ -1.6
CSMD3-210ENST00000534172 IQCA1LA6NCM1 817 aa5.03□□□□□ -1.6
CSMD3-210ENST00000534172 AGRPO00253 132 aa5.03□□□□□ -1.6
CSMD3-210ENST00000534172 ITGA4P13612 1032 aa5.03□□□□□ -1.6
CSMD3-210ENST00000534172 PRKCQQ04759 706 aa5.03□□□□□ -1.6
CSMD3-210ENST00000534172 DDR2Q16832 855 aa5.03□□□□□ -1.6
CSMD3-210ENST00000534172 CLEC16AQ2KHT3 1053 aa5.03□□□□□ -1.6
CSMD3-210ENST00000534172 HEATR6Q6AI08 1181 aaKnown RBP5.03□□□□□ -1.6
CSMD3-210ENST00000534172 TMPRSS7Q7RTY8 843 aa5.03□□□□□ -1.6
CSMD3-210ENST00000534172 HNRNPLLQ8WVV9 542 aaKnown RBP5.03□□□□□ -1.6
CSMD3-210ENST00000534172 TBX22Q9Y458 520 aa5.03□□□□□ -1.6
CSMD3-210ENST00000534172 PPM1BO75688 479 aa5.03□□□□□ -1.6
CSMD3-210ENST00000534172 DDAH1O94760 285 aa5.03□□□□□ -1.6
CSMD3-210ENST00000534172 POLR2BP30876 1174 aaKnown RBP5.03□□□□□ -1.6
CSMD3-210ENST00000534172 AUHQ13825 339 aaKnown RBP5.03□□□□□ -1.6
CSMD3-210ENST00000534172 DTWD2Q8NBA8 298 aa5.03□□□□□ -1.6
CSMD3-210ENST00000534172 ST13P5Q8NFI4 369 aaPredicted RBP5.03□□□□□ -1.6
CSMD3-210ENST00000534172 HRASLS5Q96KN8 279 aa5.03□□□□□ -1.6
CSMD3-210ENST00000534172 OSBPL2Q9H1P3 480 aa5.03□□□□□ -1.6
CSMD3-210ENST00000534172 FBXL21Q9UKT6 434 aa5.03□□□□□ -1.6
CSMD3-210ENST00000534172 DIS3Q9Y2L1 958 aaKnown RBP5.03□□□□□ -1.6
CSMD3-210ENST00000534172 SF3B6Q9Y3B4 125 aaKnown RBP5.03□□□□□ -1.6
CSMD3-210ENST00000534172 COL17A1Q9UMD9 1497 aaPredicted RBP5.03□□□□□ -1.6
CSMD3-210ENST00000534172 LTBP3Q9NS15 1303 aa5.03□□□□□ -1.6
CSMD3-210ENST00000534172 SDE2Q6IQ49 451 aa5.02□□□□□ -1.61
CSMD3-210ENST00000534172 KIAA1211LQ6NV74 962 aa5.02□□□□□ -1.61
CSMD3-210ENST00000534172 SYTL5Q8TDW5 730 aaPredicted RBP5.02□□□□□ -1.61
CSMD3-210ENST00000534172 CCDC120Q96HB5 630 aa5.02□□□□□ -1.61
CSMD3-210ENST00000534172 WHRNQ9P202 907 aa5.02□□□□□ -1.61
CSMD3-210ENST00000534172 PRNPP04156 253 aa5.02□□□□□ -1.61
CSMD3-210ENST00000534172 DAGLBQ8NCG7 672 aa5.02□□□□□ -1.61
CSMD3-210ENST00000534172 MRFAP1L1Q96HT8 127 aa5.02□□□□□ -1.61
CSMD3-210ENST00000534172 LMCD1Q9NZU5 365 aa5.02□□□□□ -1.61
CSMD3-210ENST00000534172 FHOD1Q9Y613 1164 aa5.02□□□□□ -1.61
CSMD3-210ENST00000534172 SBNO2Q9Y2G9 1366 aa5.02□□□□□ -1.61
CSMD3-210ENST00000534172 IFRD2Q12894 506 aaPredicted RBP5.01□□□□□ -1.61
CSMD3-210ENST00000534172 SERINC3Q13530 473 aa5.01□□□□□ -1.61
CSMD3-210ENST00000534172 RASGRF1Q13972 1273 aa5.01□□□□□ -1.61
CSMD3-210ENST00000534172 ZYXQ15942 572 aaKnown RBP5.01□□□□□ -1.61
CSMD3-210ENST00000534172 POMZP3Q6PJE2 187 aa5.01□□□□□ -1.61
CSMD3-210ENST00000534172 NLGN1Q8N2Q7 840 aa5.01□□□□□ -1.61
CSMD3-210ENST00000534172 ZNF655Q8N720 491 aaPredicted RBP5.01□□□□□ -1.61
CSMD3-210ENST00000534172 SYTL4Q96C24 671 aaPredicted RBP5.01□□□□□ -1.61
CSMD3-210ENST00000534172 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.01□□□□□ -1.61
CSMD3-210ENST00000534172 SIGLEC6O43699 453 aa5.01□□□□□ -1.61
CSMD3-210ENST00000534172 ADAM23O75077 832 aa5.01□□□□□ -1.61
CSMD3-210ENST00000534172 GSNP06396 782 aa5.01□□□□□ -1.61
CSMD3-210ENST00000534172 TNK2Q07912 1038 aa5.01□□□□□ -1.61
CSMD3-210ENST00000534172 ZC3H12BQ5HYM0 836 aaKnown RBP5.01□□□□□ -1.61
CSMD3-210ENST00000534172 NOL9Q5SY16 702 aaKnown RBP5.01□□□□□ -1.61
CSMD3-210ENST00000534172 EGFLAMQ63HQ2 1017 aa5.01□□□□□ -1.61
CSMD3-210ENST00000534172 VSIG10LQ86VR7 867 aa5.01□□□□□ -1.61
CSMD3-210ENST00000534172 SGSM3Q96HU1 749 aa5.01□□□□□ -1.61
CSMD3-210ENST00000534172 RCC1LQ96I51 464 aaKnown RBP5.01□□□□□ -1.61
CSMD3-210ENST00000534172 ZC3H7BQ9UGR2 993 aaKnown RBP5.01□□□□□ -1.61
CSMD3-210ENST00000534172 MSRB2Q9Y3D2 182 aa5.01□□□□□ -1.61
CSMD3-210ENST00000534172 SRFP11831 508 aa5□□□□□ -1.61
CSMD3-210ENST00000534172 CD247P20963 164 aa5□□□□□ -1.61
CSMD3-210ENST00000534172 NOP2P46087 812 aaKnown RBP5□□□□□ -1.61
CSMD3-210ENST00000534172 NMIQ13287 307 aaPredicted RBP5□□□□□ -1.61
CSMD3-210ENST00000534172 BMS1Q14692 1282 aaKnown RBP5□□□□□ -1.61
CSMD3-210ENST00000534172 KLHL6Q8WZ60 621 aa5□□□□□ -1.61
CSMD3-210ENST00000534172 HAUS7Q99871 368 aa5□□□□□ -1.61
CSMD3-210ENST00000534172 ST14Q9Y5Y6 855 aa5□□□□□ -1.61
CSMD3-210ENST00000534172 KIAA1324LA8MWY0 1029 aaPredicted RBP5□□□□□ -1.61
CSMD3-210ENST00000534172 NOP56O00567 594 aaKnown RBP5□□□□□ -1.61
CSMD3-210ENST00000534172 PDPK1O15530 556 aa5□□□□□ -1.61
CSMD3-210ENST00000534172 GJB6O95452 261 aa5□□□□□ -1.61
CSMD3-210ENST00000534172 TGFB1P01137 390 aa5□□□□□ -1.61
CSMD3-210ENST00000534172 ITIH2P19823 946 aa5□□□□□ -1.61
CSMD3-210ENST00000534172 CWF19L1Q69YN2 538 aaKnown RBP5□□□□□ -1.61
CSMD3-210ENST00000534172 C6orf15Q6UXA7 325 aaPredicted RBP5□□□□□ -1.61
CSMD3-210ENST00000534172 TSPYL5Q86VY4 417 aaPredicted RBP5□□□□□ -1.61
CSMD3-210ENST00000534172 PPFIBP1Q86W92 1011 aa5□□□□□ -1.61
CSMD3-210ENST00000534172 DTX1Q86Y01 620 aa5□□□□□ -1.61
CSMD3-210ENST00000534172 SPACA3Q8IXA5 215 aa5□□□□□ -1.61
CSMD3-210ENST00000534172 SHISA5Q8N114 240 aa5□□□□□ -1.61
CSMD3-210ENST00000534172 Q96M66 194 aa5□□□□□ -1.61
CSMD3-210ENST00000534172 DSCC1Q9BVC3 393 aa5□□□□□ -1.61
CSMD3-210ENST00000534172 GP6Q9HCN6 339 aa5□□□□□ -1.61
CSMD3-210ENST00000534172 CHST7Q9NS84 486 aa5□□□□□ -1.61
CSMD3-210ENST00000534172 SLC5A6Q9Y289 635 aa5□□□□□ -1.61
CSMD3-210ENST00000534172 SSU72P8A0A1W2PR75 194 aa4.99□□□□□ -1.61
CSMD3-210ENST00000534172 FAM86C2PA6NEL3 165 aa4.99□□□□□ -1.61
CSMD3-210ENST00000534172 WDR62O43379 1518 aa4.99□□□□□ -1.61
CSMD3-210ENST00000534172 GRB10Q13322 594 aa4.99□□□□□ -1.61
CSMD3-210ENST00000534172 NKPD1Q17RQ9 610 aa4.99□□□□□ -1.61
CSMD3-210ENST00000534172 AXDND1Q5T1B0 1012 aaPredicted RBP4.99□□□□□ -1.61
CSMD3-210ENST00000534172 RNF111Q6ZNA4 994 aa4.99□□□□□ -1.61
CSMD3-210ENST00000534172 ADAT2Q7Z6V5 191 aaKnown RBP4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms