RNA–Protein interactions for RNA: ENST00000534143.5

CMTM1-220, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 781 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-220ENST00000534143 FAM227BQ96M60 508 aa7.37□□□□□ -1.23
CMTM1-220ENST00000534143 DIAPH3Q9NSV4 1193 aa7.37□□□□□ -1.23
CMTM1-220ENST00000534143 ZNF358Q9NW07 568 aa7.37□□□□□ -1.23
CMTM1-220ENST00000534143 COL4A5P29400 1685 aa7.37□□□□□ -1.23
CMTM1-220ENST00000534143 SBF1O95248 1867 aa7.36□□□□□ -1.23
CMTM1-220ENST00000534143 RAD50Q92878 1312 aa7.36□□□□□ -1.23
CMTM1-220ENST00000534143 YDJCA8MPS7 323 aa7.36□□□□□ -1.23
CMTM1-220ENST00000534143 PPIP5K2O43314 1243 aa7.36□□□□□ -1.23
CMTM1-220ENST00000534143 EPB41L2O43491 1005 aaKnown RBP7.36□□□□□ -1.23
CMTM1-220ENST00000534143 ECE2O60344 883 aa7.36□□□□□ -1.23
CMTM1-220ENST00000534143 EIF5BO60841 1220 aaKnown RBP7.36□□□□□ -1.23
CMTM1-220ENST00000534143 IDH1O75874 414 aaKnown RBP7.36□□□□□ -1.23
CMTM1-220ENST00000534143 PDE6AP16499 860 aa7.36□□□□□ -1.23
CMTM1-220ENST00000534143 IARSP41252 1262 aaKnown RBP7.36□□□□□ -1.23
CMTM1-220ENST00000534143 PRELPP51888 382 aa7.36□□□□□ -1.23
CMTM1-220ENST00000534143 FKBP1AP62942 108 aaKnown RBP7.36□□□□□ -1.23
CMTM1-220ENST00000534143 MAP3K12Q12852 859 aa7.36□□□□□ -1.23
CMTM1-220ENST00000534143 CHAF1AQ13111 956 aaPredicted RBP7.36□□□□□ -1.23
CMTM1-220ENST00000534143 GRIK5Q16478 980 aa7.36□□□□□ -1.23
CMTM1-220ENST00000534143 LRRFIP1Q32MZ4 808 aaKnown RBP7.36□□□□□ -1.23
CMTM1-220ENST00000534143 ZSCAN25Q6NSZ9 544 aa7.36□□□□□ -1.23
CMTM1-220ENST00000534143 TMED8Q6PL24 325 aaPredicted RBP7.36□□□□□ -1.23
CMTM1-220ENST00000534143 CWC27Q6UX04 472 aaKnown RBP7.36□□□□□ -1.23
CMTM1-220ENST00000534143 PGBD3Q8N328 593 aa7.36□□□□□ -1.23
CMTM1-220ENST00000534143 ZGPATQ8N5A5 531 aaKnown RBP7.36□□□□□ -1.23
CMTM1-220ENST00000534143 WHAMMQ8TF30 809 aa7.36□□□□□ -1.23
CMTM1-220ENST00000534143 ZNF526Q8TF50 670 aaPredicted RBP7.36□□□□□ -1.23
CMTM1-220ENST00000534143 ZNF384Q8TF68 577 aa7.36□□□□□ -1.23
CMTM1-220ENST00000534143 APPBP2Q92624 585 aa7.36□□□□□ -1.23
CMTM1-220ENST00000534143 OSBP2Q969R2 916 aa7.36□□□□□ -1.23
CMTM1-220ENST00000534143 SEC62Q99442 399 aaKnown RBP7.36□□□□□ -1.23
CMTM1-220ENST00000534143 CFHR5Q9BXR6 569 aa7.36□□□□□ -1.23
CMTM1-220ENST00000534143 USP26Q9BXU7 913 aa7.36□□□□□ -1.23
CMTM1-220ENST00000534143 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.36□□□□□ -1.23
CMTM1-220ENST00000534143 TAOK3Q9H2K8 898 aa7.36□□□□□ -1.23
CMTM1-220ENST00000534143 CRISPLD1Q9H336 500 aa7.36□□□□□ -1.23
CMTM1-220ENST00000534143 RUBCNLQ9H714 662 aa7.36□□□□□ -1.23
CMTM1-220ENST00000534143 DBNDD1Q9H9R9 158 aa7.36□□□□□ -1.23
CMTM1-220ENST00000534143 KCNQ5Q9NR82 932 aa7.36□□□□□ -1.23
CMTM1-220ENST00000534143 ZNF277Q9NRM2 450 aaPredicted RBP7.36□□□□□ -1.23
CMTM1-220ENST00000534143 HELLSQ9NRZ9 838 aa7.36□□□□□ -1.23
CMTM1-220ENST00000534143 LRP2BPQ9P2M1 347 aa7.36□□□□□ -1.23
CMTM1-220ENST00000534143 TFIP11Q9UBB9 837 aaKnown RBP7.36□□□□□ -1.23
CMTM1-220ENST00000534143 ABCF2Q9UG63 623 aa7.36□□□□□ -1.23
CMTM1-220ENST00000534143 MKRN1Q9UHC7 482 aaKnown RBP7.36□□□□□ -1.23
CMTM1-220ENST00000534143 USP3Q9Y6I4 520 aa7.36□□□□□ -1.23
CMTM1-220ENST00000534143 DICER1Q9UPY3 1922 aaKnown RBP7.36□□□□□ -1.23
CMTM1-220ENST00000534143 MYH2Q9UKX2 1941 aa7.35□□□□□ -1.23
CMTM1-220ENST00000534143 ZNF532Q9HCE3 1301 aa7.35□□□□□ -1.23
CMTM1-220ENST00000534143 M0R2C6 588 aa7.35□□□□□ -1.23
CMTM1-220ENST00000534143 PRDX5P30044 214 aa7.35□□□□□ -1.23
CMTM1-220ENST00000534143 MFAP1P55081 439 aaKnown RBP7.35□□□□□ -1.23
CMTM1-220ENST00000534143 CLDN10P78369 228 aa7.35□□□□□ -1.23
CMTM1-220ENST00000534143 MECOMQ03112 1051 aa7.35□□□□□ -1.23
CMTM1-220ENST00000534143 UBAP2LQ14157 1087 aaKnown RBP7.35□□□□□ -1.23
CMTM1-220ENST00000534143 MCMDC2Q4G0Z9 681 aa7.35□□□□□ -1.23
CMTM1-220ENST00000534143 DACT2Q5SW24 774 aa7.35□□□□□ -1.23
CMTM1-220ENST00000534143 SLC9C2Q5TAH2 1124 aa7.35□□□□□ -1.23
CMTM1-220ENST00000534143 STRIP1Q5VSL9 837 aa7.35□□□□□ -1.23
CMTM1-220ENST00000534143 SPTY2D1Q68D10 685 aaPredicted RBP7.35□□□□□ -1.23
CMTM1-220ENST00000534143 TTLL5Q6EMB2 1281 aa7.35□□□□□ -1.23
CMTM1-220ENST00000534143 ZNF589Q86UQ0 364 aaPredicted RBP7.35□□□□□ -1.23
CMTM1-220ENST00000534143 LARGE2Q8N3Y3 721 aa7.35□□□□□ -1.23
CMTM1-220ENST00000534143 CERS5Q8N5B7 392 aa7.35□□□□□ -1.23
CMTM1-220ENST00000534143 MAGEB6Q8N7X4 407 aa7.35□□□□□ -1.23
CMTM1-220ENST00000534143 C1orf216Q8TAB5 229 aa7.35□□□□□ -1.23
CMTM1-220ENST00000534143 TBC1D22AQ8WUA7 517 aa7.35□□□□□ -1.23
CMTM1-220ENST00000534143 UBE2Q2Q8WVN8 375 aa7.35□□□□□ -1.23
CMTM1-220ENST00000534143 NSUN4Q96CB9 384 aaKnown RBP7.35□□□□□ -1.23
CMTM1-220ENST00000534143 CALR3Q96L12 384 aaKnown RBP7.35□□□□□ -1.23
CMTM1-220ENST00000534143 LSG1Q9H089 658 aaKnown RBP7.35□□□□□ -1.23
CMTM1-220ENST00000534143 KIAA1024Q9UPX6 916 aa7.35□□□□□ -1.23
CMTM1-220ENST00000534143 JAG2Q9Y219 1238 aa7.35□□□□□ -1.23
CMTM1-220ENST00000534143 SUGT1Q9Y2Z0 365 aa7.35□□□□□ -1.23
CMTM1-220ENST00000534143 MAST2Q6P0Q8 1798 aa7.35□□□□□ -1.23
CMTM1-220ENST00000534143 MAST3O60307 1309 aa7.34□□□□□ -1.23
CMTM1-220ENST00000534143 REC8O95072 547 aa7.34□□□□□ -1.23
CMTM1-220ENST00000534143 LDHBP07195 334 aaKnown RBP7.34□□□□□ -1.23
CMTM1-220ENST00000534143 VIL1P09327 827 aaKnown RBP7.34□□□□□ -1.23
CMTM1-220ENST00000534143 CYP7A1P22680 504 aa7.34□□□□□ -1.23
CMTM1-220ENST00000534143 EPHA4P54764 986 aa7.34□□□□□ -1.23
CMTM1-220ENST00000534143 RASSF7Q02833 373 aa7.34□□□□□ -1.23
CMTM1-220ENST00000534143 PTH1RQ03431 593 aa7.34□□□□□ -1.23
CMTM1-220ENST00000534143 EFHC2Q5JST6 749 aa7.34□□□□□ -1.23
CMTM1-220ENST00000534143 MFSD14BQ5SR56 506 aa7.34□□□□□ -1.23
CMTM1-220ENST00000534143 NAA16Q6N069 864 aaPredicted RBP7.34□□□□□ -1.23
CMTM1-220ENST00000534143 LYPD4Q6UWN0 246 aa7.34□□□□□ -1.23
CMTM1-220ENST00000534143 CCDC129Q6ZRS4 1044 aa7.34□□□□□ -1.23
CMTM1-220ENST00000534143 SVOPQ8N4V2 548 aa7.34□□□□□ -1.23
CMTM1-220ENST00000534143 OGFOD1Q8N543 542 aa7.34□□□□□ -1.23
CMTM1-220ENST00000534143 AIDAQ96BJ3 306 aa7.34□□□□□ -1.23
CMTM1-220ENST00000534143 PUS7LQ9H0K6 701 aaKnown RBP7.34□□□□□ -1.23
CMTM1-220ENST00000534143 DNAAF2Q9NVR5 837 aaKnown RBP7.34□□□□□ -1.23
CMTM1-220ENST00000534143 RAI14Q9P0K7 980 aa7.34□□□□□ -1.23
CMTM1-220ENST00000534143 SCHIP1Q9P0W5 487 aaPredicted RBP7.34□□□□□ -1.23
CMTM1-220ENST00000534143 ZNRF3Q9ULT6 936 aa7.34□□□□□ -1.23
CMTM1-220ENST00000534143 CCDC171Q6TFL3 1326 aa7.33□□□□□ -1.24
CMTM1-220ENST00000534143 PALM3A6NDB9 673 aaPredicted RBP7.33□□□□□ -1.24
CMTM1-220ENST00000534143 FOXP2O15409 715 aa7.33□□□□□ -1.24
CMTM1-220ENST00000534143 GPAA1O43292 621 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms