RNA–Protein interactions for RNA: ENST00000533778.6

CHEK1-215, Transcript of checkpoint kinase 1, humanhuman

TSL 3

Gene CHEK1, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-215ENST00000533778 IFIT1BQ5T764 474 aaKnown RBP23.27■■□□□ 1.32
CHEK1-215ENST00000533778 CYB5R4Q7L1T6 521 aa23.27■■□□□ 1.32
CHEK1-215ENST00000533778 ENAHQ8N8S7 591 aaPredicted RBP23.27■■□□□ 1.32
CHEK1-215ENST00000533778 CD99L2Q8TCZ2 262 aa23.27■■□□□ 1.32
CHEK1-215ENST00000533778 ISY1Q9ULR0 285 aaKnown RBP23.27■■□□□ 1.32
CHEK1-215ENST00000533778 SPDYE16A6NNV3 312 aaPredicted RBP23.26■■□□□ 1.31
CHEK1-215ENST00000533778 IFIT3O14879 490 aaKnown RBP23.26■■□□□ 1.31
CHEK1-215ENST00000533778 GNRH1P01148 92 aa23.26■■□□□ 1.31
CHEK1-215ENST00000533778 CTU1Q7Z7A3 348 aaKnown RBP23.26■■□□□ 1.31
CHEK1-215ENST00000533778 MB21D2Q8IYB1 491 aaPredicted RBP23.26■■□□□ 1.31
CHEK1-215ENST00000533778 KCNB2Q92953 911 aa23.26■■□□□ 1.31
CHEK1-215ENST00000533778 NUP88Q99567 741 aaPredicted RBP23.26■■□□□ 1.31
CHEK1-215ENST00000533778 RBPJLQ9UBG7 517 aa23.26■■□□□ 1.31
CHEK1-215ENST00000533778 PPP1R9AQ9ULJ8 1098 aa23.26■■□□□ 1.31
CHEK1-215ENST00000533778 HMGB1P09429 215 aaKnown RBP23.25■■□□□ 1.31
CHEK1-215ENST00000533778 FCGRTP55899 365 aa23.25■■□□□ 1.31
CHEK1-215ENST00000533778 CCNA1P78396 465 aa23.25■■□□□ 1.31
CHEK1-215ENST00000533778 FAM160B2Q86V87 743 aa23.25■■□□□ 1.31
CHEK1-215ENST00000533778 PRPF38AQ8NAV1 312 aaKnown RBP23.25■■□□□ 1.31
CHEK1-215ENST00000533778 CHURC1Q8WUH1 139 aa23.25■■□□□ 1.31
CHEK1-215ENST00000533778 NEK1Q96PY6 1258 aa23.25■■□□□ 1.31
CHEK1-215ENST00000533778 SLF1Q9BQI6 1058 aa23.25■■□□□ 1.31
CHEK1-215ENST00000533778 PAGR1Q9BTK6 254 aa23.25■■□□□ 1.31
CHEK1-215ENST00000533778 USP26Q9BXU7 913 aa23.25■■□□□ 1.31
CHEK1-215ENST00000533778 EFCC1Q9HA90 598 aa23.25■■□□□ 1.31
CHEK1-215ENST00000533778 FMNL1O95466 1100 aaPredicted RBP23.24■■□□□ 1.31
CHEK1-215ENST00000533778 HOXD10P28358 340 aa23.24■■□□□ 1.31
CHEK1-215ENST00000533778 PSMC4P43686 418 aa23.24■■□□□ 1.31
CHEK1-215ENST00000533778 ERVK-9P63128 1117 aa23.24■■□□□ 1.31
CHEK1-215ENST00000533778 ERVK-24P63145 666 aa23.24■■□□□ 1.31
CHEK1-215ENST00000533778 SEC23AQ15436 765 aa23.24■■□□□ 1.31
CHEK1-215ENST00000533778 PKN2Q16513 984 aaKnown RBP23.24■■□□□ 1.31
CHEK1-215ENST00000533778 CCAR1Q8IX12 1150 aaKnown RBP23.24■■□□□ 1.31
CHEK1-215ENST00000533778 PNMA1Q8ND90 353 aa23.24■■□□□ 1.31
CHEK1-215ENST00000533778 TMEM87BQ96K49 555 aa23.24■■□□□ 1.31
CHEK1-215ENST00000533778 MTMR7Q9Y216 660 aa23.24■■□□□ 1.31
CHEK1-215ENST00000533778 TMEM232C9JQI7 657 aa23.23■■□□□ 1.31
CHEK1-215ENST00000533778 PRC1O43663 620 aa23.23■■□□□ 1.31
CHEK1-215ENST00000533778 PLA2G6O60733 806 aa23.23■■□□□ 1.31
CHEK1-215ENST00000533778 FDX1P10109 184 aa23.23■■□□□ 1.31
CHEK1-215ENST00000533778 STAT2P52630 851 aa23.23■■□□□ 1.31
CHEK1-215ENST00000533778 IKQ13123 557 aaPredicted RBP23.23■■□□□ 1.31
CHEK1-215ENST00000533778 WTAPQ15007 396 aa23.23■■□□□ 1.31
CHEK1-215ENST00000533778 CCDC96Q2M329 555 aa23.23■■□□□ 1.31
CHEK1-215ENST00000533778 TMEM67Q5HYA8 995 aa23.23■■□□□ 1.31
CHEK1-215ENST00000533778 SAMD1Q6SPF0 538 aaPredicted RBP23.23■■□□□ 1.31
CHEK1-215ENST00000533778 RASEFQ8IZ41 740 aa23.23■■□□□ 1.31
CHEK1-215ENST00000533778 TMTC2Q8N394 836 aa23.23■■□□□ 1.31
CHEK1-215ENST00000533778 TXNRD2Q9NNW7 524 aa23.23■■□□□ 1.31
CHEK1-215ENST00000533778 FBXO28Q9NVF7 368 aa23.23■■□□□ 1.31
CHEK1-215ENST00000533778 ADAMTS5Q9UNA0 930 aa23.23■■□□□ 1.31
CHEK1-215ENST00000533778 CHST3Q7LGC8 479 aa23.22■■□□□ 1.31
CHEK1-215ENST00000533778 ATG4CQ96DT6 458 aa23.22■■□□□ 1.31
CHEK1-215ENST00000533778 TRIM17Q9Y577 477 aa23.22■■□□□ 1.31
CHEK1-215ENST00000533778 CTDP1Q9Y5B0 961 aaPredicted RBP23.22■■□□□ 1.31
CHEK1-215ENST00000533778 VWA5AO00534 786 aa23.21■■□□□ 1.31
CHEK1-215ENST00000533778 ZBED4O75132 1171 aa23.21■■□□□ 1.31
CHEK1-215ENST00000533778 PDHBP11177 359 aa23.21■■□□□ 1.31
CHEK1-215ENST00000533778 PSMA5P28066 241 aa23.21■■□□□ 1.31
CHEK1-215ENST00000533778 MAPK4P31152 587 aa23.21■■□□□ 1.31
CHEK1-215ENST00000533778 PRMT2P55345 433 aa23.21■■□□□ 1.31
CHEK1-215ENST00000533778 ANTXR2P58335 489 aa23.21■■□□□ 1.31
CHEK1-215ENST00000533778 GPATCH4Q5T3I0 446 aaKnown RBP23.21■■□□□ 1.31
CHEK1-215ENST00000533778 COL13A1Q5TAT6 717 aaPredicted RBP23.21■■□□□ 1.31
CHEK1-215ENST00000533778 DHX32Q7L7V1 743 aaKnown RBP23.21■■□□□ 1.31
CHEK1-215ENST00000533778 IGDCC4Q8TDY8 1250 aa23.21■■□□□ 1.31
CHEK1-215ENST00000533778 KIFC2Q96AC6 838 aa23.21■■□□□ 1.31
CHEK1-215ENST00000533778 WDR19Q8NEZ3 1342 aa23.21■■□□□ 1.31
CHEK1-215ENST00000533778 TNPO2O14787 897 aaKnown RBP23.2■■□□□ 1.3
CHEK1-215ENST00000533778 CNMDO75829 334 aa23.2■■□□□ 1.3
CHEK1-215ENST00000533778 SNHG28P0DPA3 235 aa23.2■■□□□ 1.3
CHEK1-215ENST00000533778 Q3C1V9 767 aa23.2■■□□□ 1.3
CHEK1-215ENST00000533778 POTEEQ6S8J3 1075 aa23.2■■□□□ 1.3
CHEK1-215ENST00000533778 KCTD1Q719H9 257 aa23.2■■□□□ 1.3
CHEK1-215ENST00000533778 OTOP1Q7RTM1 612 aa23.2■■□□□ 1.3
CHEK1-215ENST00000533778 COA7Q96BR5 231 aa23.2■■□□□ 1.3
CHEK1-215ENST00000533778 CHMP4CQ96CF2 233 aa23.2■■□□□ 1.3
CHEK1-215ENST00000533778 ARHGAP39Q9C0H5 1083 aa23.2■■□□□ 1.3
CHEK1-215ENST00000533778 BTBD7Q9P203 1132 aa23.2■■□□□ 1.3
CHEK1-215ENST00000533778 SNX14Q9Y5W7 946 aa23.2■■□□□ 1.3
CHEK1-215ENST00000533778 ZNF543Q08ER8 600 aa23.19■■□□□ 1.3
CHEK1-215ENST00000533778 ADCK5Q3MIX3 580 aa23.19■■□□□ 1.3
CHEK1-215ENST00000533778 CATIPQ7Z7H3 387 aa23.19■■□□□ 1.3
CHEK1-215ENST00000533778 TRIM47Q96LD4 638 aa23.19■■□□□ 1.3
CHEK1-215ENST00000533778 CWC22Q9HCG8 908 aaKnown RBP23.19■■□□□ 1.3
CHEK1-215ENST00000533778 COPB2P35606 906 aa23.18■■□□□ 1.3
CHEK1-215ENST00000533778 LIFRP42702 1097 aa23.18■■□□□ 1.3
CHEK1-215ENST00000533778 PLS1Q14651 629 aa23.18■■□□□ 1.3
CHEK1-215ENST00000533778 ASPRV1Q53RT3 343 aa23.18■■□□□ 1.3
CHEK1-215ENST00000533778 BTNL9Q6UXG8 535 aa23.18■■□□□ 1.3
CHEK1-215ENST00000533778 JAKMIP1Q96N16 626 aaKnown RBP23.18■■□□□ 1.3
CHEK1-215ENST00000533778 SPATC1LQ9H0A9 340 aa23.18■■□□□ 1.3
CHEK1-215ENST00000533778 FRMPD2Q68DX3 1309 aaPredicted RBP23.17■■□□□ 1.3
CHEK1-215ENST00000533778 SH2B2O14492 632 aaPredicted RBP23.17■■□□□ 1.3
CHEK1-215ENST00000533778 PEX10O60683 326 aa23.17■■□□□ 1.3
CHEK1-215ENST00000533778 ECM2O94769 699 aaPredicted RBP23.17■■□□□ 1.3
CHEK1-215ENST00000533778 SLC25A27O95847 323 aa23.17■■□□□ 1.3
CHEK1-215ENST00000533778 PARP1P09874 1014 aaKnown RBP23.17■■□□□ 1.3
CHEK1-215ENST00000533778 OAZ1P54368 228 aa23.17■■□□□ 1.3
CHEK1-215ENST00000533778 TMEM132BQ14DG7 1078 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms