RNA–Protein interactions for RNA: ENST00000533685.1

SYVN1-215, Transcript of synoviolin 1, humanhuman

TSL 3

Gene SYVN1, Length 485 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-215ENST00000533685 TMTC3Q6ZXV5 915 aa14.41□□□□□ -0.1
SYVN1-215ENST00000533685 NUP133Q8WUM0 1156 aa14.41□□□□□ -0.1
SYVN1-215ENST00000533685 CCDC102AQ96A19 550 aa14.41□□□□□ -0.1
SYVN1-215ENST00000533685 WNK4Q96J92 1243 aa14.41□□□□□ -0.1
SYVN1-215ENST00000533685 SPZ1Q9BXG8 430 aa14.41□□□□□ -0.1
SYVN1-215ENST00000533685 EMILIN3Q9NT22 766 aa14.41□□□□□ -0.1
SYVN1-215ENST00000533685 TMOD4Q9NZQ9 345 aa14.41□□□□□ -0.1
SYVN1-215ENST00000533685 MAD2L2Q9UI95 211 aa14.41□□□□□ -0.1
SYVN1-215ENST00000533685 SLC45A1Q9Y2W3 748 aa14.41□□□□□ -0.1
SYVN1-215ENST00000533685 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.41□□□□□ -0.1
SYVN1-215ENST00000533685 MYPNQ86TC9 1320 aa14.41□□□□□ -0.1
SYVN1-215ENST00000533685 CPLX1O14810 134 aa14.4□□□□□ -0.1
SYVN1-215ENST00000533685 LARGE1O95461 756 aa14.4□□□□□ -0.1
SYVN1-215ENST00000533685 SLC10A3P09131 477 aa14.4□□□□□ -0.1
SYVN1-215ENST00000533685 VCAM1P19320 739 aa14.4□□□□□ -0.1
SYVN1-215ENST00000533685 GTF2A2P52657 109 aa14.4□□□□□ -0.1
SYVN1-215ENST00000533685 CCDC84Q86UT8 332 aaPredicted RBP14.4□□□□□ -0.1
SYVN1-215ENST00000533685 FAM160B2Q86V87 743 aa14.4□□□□□ -0.1
SYVN1-215ENST00000533685 RASAL3Q86YV0 1011 aa14.4□□□□□ -0.1
SYVN1-215ENST00000533685 RGS22Q8NE09 1264 aa14.4□□□□□ -0.1
SYVN1-215ENST00000533685 MYL10Q9BUA6 226 aa14.4□□□□□ -0.1
SYVN1-215ENST00000533685 FEM1BQ9UK73 627 aa14.4□□□□□ -0.1
SYVN1-215ENST00000533685 STK36Q9NRP7 1315 aa14.4□□□□□ -0.1
SYVN1-215ENST00000533685 TESPA1A2RU30 521 aaPredicted RBP14.39□□□□□ -0.11
SYVN1-215ENST00000533685 RASSF10A6NK89 507 aa14.39□□□□□ -0.11
SYVN1-215ENST00000533685 KLRF2D3W0D1 207 aa14.39□□□□□ -0.11
SYVN1-215ENST00000533685 FDX1P10109 184 aa14.39□□□□□ -0.11
SYVN1-215ENST00000533685 CETPP11597 493 aa14.39□□□□□ -0.11
SYVN1-215ENST00000533685 HOXA7P31268 230 aaPredicted RBP14.39□□□□□ -0.11
SYVN1-215ENST00000533685 GJA5P36382 358 aa14.39□□□□□ -0.11
SYVN1-215ENST00000533685 STAT2P52630 851 aa14.39□□□□□ -0.11
SYVN1-215ENST00000533685 HMGCS2P54868 508 aa14.39□□□□□ -0.11
SYVN1-215ENST00000533685 HMGN5P82970 282 aaKnown RBP14.39□□□□□ -0.11
SYVN1-215ENST00000533685 FUT2Q10981 343 aa14.39□□□□□ -0.11
SYVN1-215ENST00000533685 ST3GAL1Q11201 340 aa14.39□□□□□ -0.11
SYVN1-215ENST00000533685 PABPC4Q13310 644 aaKnown RBP eCLIP14.39□□□□□ -0.11
SYVN1-215ENST00000533685 NTRK3Q16288 839 aa14.39□□□□□ -0.11
SYVN1-215ENST00000533685 NOL8Q76FK4 1167 aaKnown RBP14.39□□□□□ -0.11
SYVN1-215ENST00000533685 FAM177A1Q8N128 213 aaPredicted RBP14.39□□□□□ -0.11
SYVN1-215ENST00000533685 CHURC1Q8WUH1 139 aa14.39□□□□□ -0.11
SYVN1-215ENST00000533685 CNKSR2Q8WXI2 1034 aa14.39□□□□□ -0.11
SYVN1-215ENST00000533685 RNF26Q9BY78 433 aaPredicted RBP14.39□□□□□ -0.11
SYVN1-215ENST00000533685 ZCCHC17Q9NP64 241 aaKnown RBP14.39□□□□□ -0.11
SYVN1-215ENST00000533685 NAP1L2Q9ULW6 460 aaPredicted RBP14.39□□□□□ -0.11
SYVN1-215ENST00000533685 LOC285556D6RIA3 1793 aa14.39□□□□□ -0.11
SYVN1-215ENST00000533685 MANSC4A6NHS7 340 aaPredicted RBP14.38□□□□□ -0.11
SYVN1-215ENST00000533685 PDIA4P13667 645 aaKnown RBP14.38□□□□□ -0.11
SYVN1-215ENST00000533685 CDC27P30260 824 aa14.38□□□□□ -0.11
SYVN1-215ENST00000533685 ADD1P35611 737 aaKnown RBP14.38□□□□□ -0.11
SYVN1-215ENST00000533685 ZNF157P51786 506 aaPredicted RBP14.38□□□□□ -0.11
SYVN1-215ENST00000533685 INHBEP58166 350 aa14.38□□□□□ -0.11
SYVN1-215ENST00000533685 CCDC96Q2M329 555 aa14.38□□□□□ -0.11
SYVN1-215ENST00000533685 KIAA1755Q5JYT7 1200 aa14.38□□□□□ -0.11
SYVN1-215ENST00000533685 SMARCC2Q8TAQ2 1214 aa14.38□□□□□ -0.11
SYVN1-215ENST00000533685 MS4A4AQ96JQ5 239 aa14.38□□□□□ -0.11
SYVN1-215ENST00000533685 LARP6Q9BRS8 491 aaKnown RBP14.38□□□□□ -0.11
SYVN1-215ENST00000533685 RIOX1Q9H6W3 641 aa14.38□□□□□ -0.11
SYVN1-215ENST00000533685 PNMA2Q9UL42 364 aa14.38□□□□□ -0.11
SYVN1-215ENST00000533685 ABT1Q9ULW3 272 aaKnown RBP14.38□□□□□ -0.11
SYVN1-215ENST00000533685 AGTPBP1Q9UPW5 1226 aa14.38□□□□□ -0.11
SYVN1-215ENST00000533685 PTPRFP10586 1907 aa14.37□□□□□ -0.11
SYVN1-215ENST00000533685 USP17L15C9J2P7 530 aa14.37□□□□□ -0.11
SYVN1-215ENST00000533685 USP17L13C9JLJ4 530 aa14.37□□□□□ -0.11
SYVN1-215ENST00000533685 USP17L11C9JVI0 530 aa14.37□□□□□ -0.11
SYVN1-215ENST00000533685 USP17L18D6R9N7 530 aa14.37□□□□□ -0.11
SYVN1-215ENST00000533685 USP17L22D6RA61 530 aa14.37□□□□□ -0.11
SYVN1-215ENST00000533685 USP17L17D6RBQ6 530 aa14.37□□□□□ -0.11
SYVN1-215ENST00000533685 USP17L19D6RCP7 530 aa14.37□□□□□ -0.11
SYVN1-215ENST00000533685 USP17L20D6RJB6 530 aa14.37□□□□□ -0.11
SYVN1-215ENST00000533685 hCG_1984214I3L0E3 225 aa14.37□□□□□ -0.11
SYVN1-215ENST00000533685 RXRAP19793 462 aa14.37□□□□□ -0.11
SYVN1-215ENST00000533685 CCT2P78371 535 aaKnown RBP14.37□□□□□ -0.11
SYVN1-215ENST00000533685 USP17L24Q0WX57 530 aa14.37□□□□□ -0.11
SYVN1-215ENST00000533685 STK3Q13188 491 aa14.37□□□□□ -0.11
SYVN1-215ENST00000533685 MOGSQ13724 837 aa14.37□□□□□ -0.11
SYVN1-215ENST00000533685 NBPF11Q86T75 865 aa14.37□□□□□ -0.11
SYVN1-215ENST00000533685 TEX2Q8IWB9 1127 aa14.37□□□□□ -0.11
SYVN1-215ENST00000533685 CCDC83Q8IWF9 413 aa14.37□□□□□ -0.11
SYVN1-215ENST00000533685 REM2Q8IYK8 340 aaPredicted RBP14.37□□□□□ -0.11
SYVN1-215ENST00000533685 TRIM22Q8IYM9 498 aa14.37□□□□□ -0.11
SYVN1-215ENST00000533685 SPICE1Q8N0Z3 855 aa14.37□□□□□ -0.11
SYVN1-215ENST00000533685 STAG2Q8N3U4 1231 aa14.37□□□□□ -0.11
SYVN1-215ENST00000533685 ZNF713Q8N859 430 aaPredicted RBP14.37□□□□□ -0.11
SYVN1-215ENST00000533685 NECAB1Q8N987 351 aa14.37□□□□□ -0.11
SYVN1-215ENST00000533685 NSUN7Q8NE18 718 aaKnown RBP14.37□□□□□ -0.11
SYVN1-215ENST00000533685 GTF3C2Q8WUA4 911 aaPredicted RBP14.37□□□□□ -0.11
SYVN1-215ENST00000533685 MTMR8Q96EF0 704 aa14.37□□□□□ -0.11
SYVN1-215ENST00000533685 NCOA5Q9HCD5 579 aaKnown RBP14.37□□□□□ -0.11
SYVN1-215ENST00000533685 KIF3AQ9Y496 699 aa14.37□□□□□ -0.11
SYVN1-215ENST00000533685 PRPF3O43395 683 aaKnown RBP14.36□□□□□ -0.11
SYVN1-215ENST00000533685 FMNL1O95466 1100 aaPredicted RBP14.36□□□□□ -0.11
SYVN1-215ENST00000533685 CTDNEP1O95476 244 aa14.36□□□□□ -0.11
SYVN1-215ENST00000533685 TRAF1Q13077 416 aa14.36□□□□□ -0.11
SYVN1-215ENST00000533685 ZYXQ15942 572 aaKnown RBP14.36□□□□□ -0.11
SYVN1-215ENST00000533685 FAM83BQ5T0W9 1011 aa14.36□□□□□ -0.11
SYVN1-215ENST00000533685 LBX2Q6XYB7 198 aa14.36□□□□□ -0.11
SYVN1-215ENST00000533685 CATSPERGQ6ZRH7 1159 aa14.36□□□□□ -0.11
SYVN1-215ENST00000533685 ANKRD23Q86SG2 305 aa14.36□□□□□ -0.11
SYVN1-215ENST00000533685 CCDC144CPQ8IYA2 1237 aa14.36□□□□□ -0.11
SYVN1-215ENST00000533685 SRBD1Q8N5C6 995 aaKnown RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms