RNA–Protein interactions for RNA: ENST00000533619.5

FGFR1-239, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 4

Gene FGFR1, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-239ENST00000533619 EPB41L2O43491 1005 aaKnown RBP20.12■□□□□ 0.81
FGFR1-239ENST00000533619 ERVK-9P63128 1117 aa20.12■□□□□ 0.81
FGFR1-239ENST00000533619 ERVK-24P63145 666 aa20.12■□□□□ 0.81
FGFR1-239ENST00000533619 RCSD1Q6JBY9 416 aa20.12■□□□□ 0.81
FGFR1-239ENST00000533619 FBXO46Q6PJ61 603 aaPredicted RBP20.12■□□□□ 0.81
FGFR1-239ENST00000533619 PRPF38AQ8NAV1 312 aaKnown RBP20.12■□□□□ 0.81
FGFR1-239ENST00000533619 ZKSCAN3Q9BRR0 538 aa20.12■□□□□ 0.81
FGFR1-239ENST00000533619 MCOLN1Q9GZU1 580 aa20.12■□□□□ 0.81
FGFR1-239ENST00000533619 FEM1BQ9UK73 627 aa20.12■□□□□ 0.81
FGFR1-239ENST00000533619 RLFQ13129 1914 aa20.12■□□□□ 0.81
FGFR1-239ENST00000533619 TNPO2O14787 897 aaKnown RBP20.11■□□□□ 0.81
FGFR1-239ENST00000533619 EIF5BO60841 1220 aaKnown RBP20.11■□□□□ 0.81
FGFR1-239ENST00000533619 MCCP23508 829 aa20.11■□□□□ 0.81
FGFR1-239ENST00000533619 SLC1A4P43007 532 aa20.11■□□□□ 0.81
FGFR1-239ENST00000533619 SART3Q15020 963 aaKnown RBP20.11■□□□□ 0.81
FGFR1-239ENST00000533619 CHURC1Q8WUH1 139 aa20.11■□□□□ 0.81
FGFR1-239ENST00000533619 DCAF4Q8WV16 495 aa20.11■□□□□ 0.81
FGFR1-239ENST00000533619 COA7Q96BR5 231 aa20.11■□□□□ 0.81
FGFR1-239ENST00000533619 TRIM47Q96LD4 638 aa20.11■□□□□ 0.81
FGFR1-239ENST00000533619 NUP88Q99567 741 aaPredicted RBP20.11■□□□□ 0.81
FGFR1-239ENST00000533619 SLF1Q9BQI6 1058 aa20.11■□□□□ 0.81
FGFR1-239ENST00000533619 ARHGAP39Q9C0H5 1083 aa20.11■□□□□ 0.81
FGFR1-239ENST00000533619 TXNRD2Q9NNW7 524 aa20.11■□□□□ 0.81
FGFR1-239ENST00000533619 PPP1R9AQ9ULJ8 1098 aa20.11■□□□□ 0.81
FGFR1-239ENST00000533619 ADAMTS5Q9UNA0 930 aa20.11■□□□□ 0.81
FGFR1-239ENST00000533619 ERICH2A1L162 156 aa20.1■□□□□ 0.81
FGFR1-239ENST00000533619 PLA2G6O60733 806 aa20.1■□□□□ 0.81
FGFR1-239ENST00000533619 FDX1P10109 184 aa20.1■□□□□ 0.81
FGFR1-239ENST00000533619 ZKSCAN1P17029 563 aaPredicted RBP20.1■□□□□ 0.81
FGFR1-239ENST00000533619 MAPK4P31152 587 aa20.1■□□□□ 0.81
FGFR1-239ENST00000533619 Q3C1V9 767 aa20.1■□□□□ 0.81
FGFR1-239ENST00000533619 NKX2-3Q8TAU0 364 aa20.1■□□□□ 0.81
FGFR1-239ENST00000533619 KAT14Q9H8E8 782 aa20.1■□□□□ 0.81
FGFR1-239ENST00000533619 PTPN22Q9Y2R2 807 aa20.1■□□□□ 0.81
FGFR1-239ENST00000533619 PARP14Q460N5 1801 aa20.1■□□□□ 0.81
FGFR1-239ENST00000533619 TNKSO95271 1327 aa20.09■□□□□ 0.81
FGFR1-239ENST00000533619 POTEEQ6S8J3 1075 aa20.09■□□□□ 0.81
FGFR1-239ENST00000533619 SAMD1Q6SPF0 538 aaPredicted RBP20.09■□□□□ 0.81
FGFR1-239ENST00000533619 STOX1Q6ZVD7 989 aa20.09■□□□□ 0.81
FGFR1-239ENST00000533619 FAM160B2Q86V87 743 aa20.09■□□□□ 0.81
FGFR1-239ENST00000533619 ENAHQ8N8S7 591 aaPredicted RBP20.09■□□□□ 0.81
FGFR1-239ENST00000533619 ATG4CQ96DT6 458 aa20.09■□□□□ 0.81
FGFR1-239ENST00000533619 MTA3Q9BTC8 594 aa20.09■□□□□ 0.81
FGFR1-239ENST00000533619 FBXO28Q9NVF7 368 aa20.09■□□□□ 0.81
FGFR1-239ENST00000533619 SRRDQ9UH36 339 aa20.09■□□□□ 0.81
FGFR1-239ENST00000533619 ISY1Q9ULR0 285 aaKnown RBP20.09■□□□□ 0.81
FGFR1-239ENST00000533619 TMEM232C9JQI7 657 aa20.08■□□□□ 0.81
FGFR1-239ENST00000533619 CNMDO75829 334 aa20.08■□□□□ 0.81
FGFR1-239ENST00000533619 ECM2O94769 699 aaPredicted RBP20.08■□□□□ 0.81
FGFR1-239ENST00000533619 CTGFP29279 349 aa20.08■□□□□ 0.81
FGFR1-239ENST00000533619 STAT2P52630 851 aa20.08■□□□□ 0.81
FGFR1-239ENST00000533619 CAP1Q01518 475 aa20.08■□□□□ 0.81
FGFR1-239ENST00000533619 KRT32Q14532 448 aa20.08■□□□□ 0.81
FGFR1-239ENST00000533619 TSGA10IPQ3SY00 556 aa20.08■□□□□ 0.81
FGFR1-239ENST00000533619 IFIT1BQ5T764 474 aaKnown RBP20.08■□□□□ 0.81
FGFR1-239ENST00000533619 CYB5R4Q7L1T6 521 aa20.08■□□□□ 0.81
FGFR1-239ENST00000533619 CWC22Q9HCG8 908 aaKnown RBP20.08■□□□□ 0.81
FGFR1-239ENST00000533619 BTBD7Q9P203 1132 aa20.08■□□□□ 0.81
FGFR1-239ENST00000533619 CTDP1Q9Y5B0 961 aaPredicted RBP20.08■□□□□ 0.81
FGFR1-239ENST00000533619 TAF6LQ9Y6J9 622 aa20.08■□□□□ 0.81
FGFR1-239ENST00000533619 VWA5AO00534 786 aa20.07■□□□□ 0.8
FGFR1-239ENST00000533619 IFIT3O14879 490 aaKnown RBP20.07■□□□□ 0.8
FGFR1-239ENST00000533619 ZBED4O75132 1171 aa20.07■□□□□ 0.8
FGFR1-239ENST00000533619 MCM5P33992 734 aa20.07■□□□□ 0.8
FGFR1-239ENST00000533619 IKQ13123 557 aaPredicted RBP20.07■□□□□ 0.8
FGFR1-239ENST00000533619 MB21D2Q8IYB1 491 aaPredicted RBP20.07■□□□□ 0.8
FGFR1-239ENST00000533619 PNMA1Q8ND90 353 aa20.07■□□□□ 0.8
FGFR1-239ENST00000533619 SPATC1LQ9H0A9 340 aa20.07■□□□□ 0.8
FGFR1-239ENST00000533619 MTMR7Q9Y216 660 aa20.07■□□□□ 0.8
FGFR1-239ENST00000533619 DOCK3Q8IZD9 2030 aa20.07■□□□□ 0.8
FGFR1-239ENST00000533619 A0A0G2JMZ2 1700 aa20.06■□□□□ 0.8
FGFR1-239ENST00000533619 PEX10O60683 326 aa20.06■□□□□ 0.8
FGFR1-239ENST00000533619 SEC23AQ15436 765 aa20.06■□□□□ 0.8
FGFR1-239ENST00000533619 CCDC96Q2M329 555 aa20.06■□□□□ 0.8
FGFR1-239ENST00000533619 KCTD1Q719H9 257 aa20.06■□□□□ 0.8
FGFR1-239ENST00000533619 SHCBP1Q8NEM2 672 aa20.06■□□□□ 0.8
FGFR1-239ENST00000533619 KIFC2Q96AC6 838 aa20.06■□□□□ 0.8
FGFR1-239ENST00000533619 ZSWIM8A7E2V4 1837 aa20.06■□□□□ 0.8
FGFR1-239ENST00000533619 COL11A1P12107 1806 aaPredicted RBP20.05■□□□□ 0.8
FGFR1-239ENST00000533619 SLC25A27O95847 323 aa20.05■□□□□ 0.8
FGFR1-239ENST00000533619 SNHG28P0DPA3 235 aa20.05■□□□□ 0.8
FGFR1-239ENST00000533619 PDHBP11177 359 aa20.05■□□□□ 0.8
FGFR1-239ENST00000533619 HSPA4P34932 840 aa20.05■□□□□ 0.8
FGFR1-239ENST00000533619 COPB2P35606 906 aa20.05■□□□□ 0.8
FGFR1-239ENST00000533619 PLS1Q14651 629 aa20.05■□□□□ 0.8
FGFR1-239ENST00000533619 WTAPQ15007 396 aa20.05■□□□□ 0.8
FGFR1-239ENST00000533619 GPATCH4Q5T3I0 446 aaKnown RBP20.05■□□□□ 0.8
FGFR1-239ENST00000533619 PLEKHH3Q7Z736 793 aa20.05■□□□□ 0.8
FGFR1-239ENST00000533619 TMTC2Q8N394 836 aa20.05■□□□□ 0.8
FGFR1-239ENST00000533619 RAET1EQ8TD07 263 aa20.05■□□□□ 0.8
FGFR1-239ENST00000533619 TMEM87BQ96K49 555 aa20.05■□□□□ 0.8
FGFR1-239ENST00000533619 NEK1Q96PY6 1258 aa20.05■□□□□ 0.8
FGFR1-239ENST00000533619 PORCNQ9H237 461 aa20.05■□□□□ 0.8
FGFR1-239ENST00000533619 MROH8Q9H579 483 aa20.05■□□□□ 0.8
FGFR1-239ENST00000533619 HMGB1P09429 215 aaKnown RBP20.04■□□□□ 0.8
FGFR1-239ENST00000533619 STAT3P40763 770 aa20.04■□□□□ 0.8
FGFR1-239ENST00000533619 OAZ1P54368 228 aa20.04■□□□□ 0.8
FGFR1-239ENST00000533619 TMEM132BQ14DG7 1078 aa20.04■□□□□ 0.8
FGFR1-239ENST00000533619 TMEM67Q5HYA8 995 aa20.04■□□□□ 0.8
FGFR1-239ENST00000533619 BTNL9Q6UXG8 535 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms