RNA–Protein interactions for RNA: ENST00000533595.5

SF3B2-214, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5

Gene SF3B2, Length 1,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-214ENST00000533595 MTMR7Q9Y216 660 aa17.11■□□□□ 0.33
SF3B2-214ENST00000533595 HMGB1P09429 215 aaKnown RBP17.1■□□□□ 0.33
SF3B2-214ENST00000533595 BMP3P12645 472 aa17.1■□□□□ 0.33
SF3B2-214ENST00000533595 SLC1A4P43007 532 aa17.1■□□□□ 0.33
SF3B2-214ENST00000533595 COL9A3Q14050 684 aaPredicted RBP17.1■□□□□ 0.33
SF3B2-214ENST00000533595 WTAPQ15007 396 aa17.1■□□□□ 0.33
SF3B2-214ENST00000533595 PNMA1Q8ND90 353 aa17.1■□□□□ 0.33
SF3B2-214ENST00000533595 IGDCC4Q8TDY8 1250 aa17.1■□□□□ 0.33
SF3B2-214ENST00000533595 DCAF4Q8WV16 495 aa17.1■□□□□ 0.33
SF3B2-214ENST00000533595 CHMP4CQ96CF2 233 aa17.1■□□□□ 0.33
SF3B2-214ENST00000533595 JAKMIP1Q96N16 626 aaKnown RBP17.1■□□□□ 0.33
SF3B2-214ENST00000533595 ISY1Q9ULR0 285 aaKnown RBP17.1■□□□□ 0.33
SF3B2-214ENST00000533595 SPDYE16A6NNV3 312 aaPredicted RBP17.09■□□□□ 0.33
SF3B2-214ENST00000533595 FKTNO75072 461 aa17.09■□□□□ 0.33
SF3B2-214ENST00000533595 CAPN15O75808 1086 aa17.09■□□□□ 0.33
SF3B2-214ENST00000533595 BCRP11274 1271 aa17.09■□□□□ 0.33
SF3B2-214ENST00000533595 PSMA5P28066 241 aa17.09■□□□□ 0.33
SF3B2-214ENST00000533595 DSG3P32926 999 aa17.09■□□□□ 0.33
SF3B2-214ENST00000533595 SP3Q02447 781 aa17.09■□□□□ 0.33
SF3B2-214ENST00000533595 LBX2Q6XYB7 198 aa17.09■□□□□ 0.33
SF3B2-214ENST00000533595 DHX32Q7L7V1 743 aaKnown RBP17.09■□□□□ 0.33
SF3B2-214ENST00000533595 TNS4Q8IZW8 715 aa17.09■□□□□ 0.33
SF3B2-214ENST00000533595 ZNF296Q8WUU4 475 aaPredicted RBP17.09■□□□□ 0.33
SF3B2-214ENST00000533595 TMEM87BQ96K49 555 aa17.09■□□□□ 0.33
SF3B2-214ENST00000533595 MYPNQ86TC9 1320 aa17.09■□□□□ 0.33
SF3B2-214ENST00000533595 WDR19Q8NEZ3 1342 aa17.09■□□□□ 0.33
SF3B2-214ENST00000533595 PDHBP11177 359 aa17.08■□□□□ 0.32
SF3B2-214ENST00000533595 EXOSC10Q01780 885 aaKnown RBP17.08■□□□□ 0.32
SF3B2-214ENST00000533595 FAM110CQ1W6H9 321 aa17.08■□□□□ 0.32
SF3B2-214ENST00000533595 CCDC96Q2M329 555 aa17.08■□□□□ 0.32
SF3B2-214ENST00000533595 SAMD1Q6SPF0 538 aaPredicted RBP17.08■□□□□ 0.32
SF3B2-214ENST00000533595 KCTD1Q719H9 257 aa17.08■□□□□ 0.32
SF3B2-214ENST00000533595 RASGRP2Q7LDG7 609 aa17.08■□□□□ 0.32
SF3B2-214ENST00000533595 ANKRD13CQ8N6S4 541 aa17.08■□□□□ 0.32
SF3B2-214ENST00000533595 SLF1Q9BQI6 1058 aa17.08■□□□□ 0.32
SF3B2-214ENST00000533595 FBXO28Q9NVF7 368 aa17.08■□□□□ 0.32
SF3B2-214ENST00000533595 FEM1BQ9UK73 627 aa17.08■□□□□ 0.32
SF3B2-214ENST00000533595 PPP1R9AQ9ULJ8 1098 aa17.08■□□□□ 0.32
SF3B2-214ENST00000533595 TMEM232C9JQI7 657 aa17.07■□□□□ 0.32
SF3B2-214ENST00000533595 SH2B2O14492 632 aaPredicted RBP17.07■□□□□ 0.32
SF3B2-214ENST00000533595 BLOC1S2Q6QNY1 142 aa17.07■□□□□ 0.32
SF3B2-214ENST00000533595 TMTC2Q8N394 836 aa17.07■□□□□ 0.32
SF3B2-214ENST00000533595 PRPF38AQ8NAV1 312 aaKnown RBP17.07■□□□□ 0.32
SF3B2-214ENST00000533595 CHURC1Q8WUH1 139 aa17.07■□□□□ 0.32
SF3B2-214ENST00000533595 ATG4CQ96DT6 458 aa17.07■□□□□ 0.32
SF3B2-214ENST00000533595 PAGR1Q9BTK6 254 aa17.07■□□□□ 0.32
SF3B2-214ENST00000533595 LRRC2Q9BYS8 371 aa17.07■□□□□ 0.32
SF3B2-214ENST00000533595 LY9Q9HBG7 655 aa17.07■□□□□ 0.32
SF3B2-214ENST00000533595 SENP2Q9HC62 589 aa17.07■□□□□ 0.32
SF3B2-214ENST00000533595 PRDM10Q9NQV6 1147 aa17.07■□□□□ 0.32
SF3B2-214ENST00000533595 GPHNQ9NQX3 736 aaPredicted RBP17.07■□□□□ 0.32
SF3B2-214ENST00000533595 RBPJLQ9UBG7 517 aa17.07■□□□□ 0.32
SF3B2-214ENST00000533595 MORF4L1Q9UBU8 362 aa17.07■□□□□ 0.32
SF3B2-214ENST00000533595 RABGAP1Q9Y3P9 1069 aa17.07■□□□□ 0.32
SF3B2-214ENST00000533595 CASP8AP2Q9UKL3 1982 aa17.07■□□□□ 0.32
SF3B2-214ENST00000533595 RLFQ13129 1914 aa17.07■□□□□ 0.32
SF3B2-214ENST00000533595 PLA2G6O60733 806 aa17.06■□□□□ 0.32
SF3B2-214ENST00000533595 SNHG28P0DPA3 235 aa17.06■□□□□ 0.32
SF3B2-214ENST00000533595 CASTP20810 708 aaKnown RBP17.06■□□□□ 0.32
SF3B2-214ENST00000533595 LIFRP42702 1097 aa17.06■□□□□ 0.32
SF3B2-214ENST00000533595 STAT2P52630 851 aa17.06■□□□□ 0.32
SF3B2-214ENST00000533595 ANAPC15P60006 121 aa17.06■□□□□ 0.32
SF3B2-214ENST00000533595 IKQ13123 557 aaPredicted RBP17.06■□□□□ 0.32
SF3B2-214ENST00000533595 KIF22Q14807 665 aa17.06■□□□□ 0.32
SF3B2-214ENST00000533595 POTEEQ6S8J3 1075 aa17.06■□□□□ 0.32
SF3B2-214ENST00000533595 FAM160B2Q86V87 743 aa17.06■□□□□ 0.32
SF3B2-214ENST00000533595 MB21D1Q8N884 522 aa17.06■□□□□ 0.32
SF3B2-214ENST00000533595 GPRC5AQ8NFJ5 357 aa17.06■□□□□ 0.32
SF3B2-214ENST00000533595 ERO1AQ96HE7 468 aa17.06■□□□□ 0.32
SF3B2-214ENST00000533595 TXNRD2Q9NNW7 524 aa17.06■□□□□ 0.32
SF3B2-214ENST00000533595 PARP14Q460N5 1801 aa17.05■□□□□ 0.32
SF3B2-214ENST00000533595 FRMPD2Q68DX3 1309 aaPredicted RBP17.05■□□□□ 0.32
SF3B2-214ENST00000533595 CPA1P15085 419 aa17.05■□□□□ 0.32
SF3B2-214ENST00000533595 RPS6KB1P23443 525 aa17.05■□□□□ 0.32
SF3B2-214ENST00000533595 ERVK-9P63128 1117 aa17.05■□□□□ 0.32
SF3B2-214ENST00000533595 ERVK-24P63145 666 aa17.05■□□□□ 0.32
SF3B2-214ENST00000533595 LACTBP83111 547 aaPredicted RBP17.05■□□□□ 0.32
SF3B2-214ENST00000533595 ZNF543Q08ER8 600 aa17.05■□□□□ 0.32
SF3B2-214ENST00000533595 GPATCH4Q5T3I0 446 aaKnown RBP17.05■□□□□ 0.32
SF3B2-214ENST00000533595 NFXL1Q6ZNB6 911 aa17.05■□□□□ 0.32
SF3B2-214ENST00000533595 CATIPQ7Z7H3 387 aa17.05■□□□□ 0.32
SF3B2-214ENST00000533595 KIFC2Q96AC6 838 aa17.05■□□□□ 0.32
SF3B2-214ENST00000533595 TCEANC2Q96MN5 208 aa17.05■□□□□ 0.32
SF3B2-214ENST00000533595 TM6SF1Q9BZW5 370 aa17.05■□□□□ 0.32
SF3B2-214ENST00000533595 GPCPD1Q9NPB8 672 aa17.05■□□□□ 0.32
SF3B2-214ENST00000533595 ADAMTS5Q9UNA0 930 aa17.05■□□□□ 0.32
SF3B2-214ENST00000533595 CCDC69A6NI79 296 aa17.04■□□□□ 0.32
SF3B2-214ENST00000533595 VWA5AO00534 786 aa17.04■□□□□ 0.32
SF3B2-214ENST00000533595 PEX10O60683 326 aa17.04■□□□□ 0.32
SF3B2-214ENST00000533595 CNMDO75829 334 aa17.04■□□□□ 0.32
SF3B2-214ENST00000533595 PARP1P09874 1014 aaKnown RBP17.04■□□□□ 0.32
SF3B2-214ENST00000533595 FGD1P98174 961 aa17.04■□□□□ 0.32
SF3B2-214ENST00000533595 ASPRV1Q53RT3 343 aa17.04■□□□□ 0.32
SF3B2-214ENST00000533595 CD99L2Q8TCZ2 262 aa17.04■□□□□ 0.32
SF3B2-214ENST00000533595 ZSWIM6Q9HCJ5 1215 aa17.04■□□□□ 0.32
SF3B2-214ENST00000533595 BTBD7Q9P203 1132 aa17.04■□□□□ 0.32
SF3B2-214ENST00000533595 CYP46A1Q9Y6A2 500 aa17.04■□□□□ 0.32
SF3B2-214ENST00000533595 ZBED4O75132 1171 aa17.03■□□□□ 0.32
SF3B2-214ENST00000533595 GOLGA8HP0CJ92 632 aa17.03■□□□□ 0.32
SF3B2-214ENST00000533595 CCNA1P78396 465 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms