RNA–Protein interactions for RNA: ENST00000533521.5

BEST1-207, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 1,128 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-207ENST00000533521 KLRC3Q07444 240 aa26.48■■□□□ 1.83
BEST1-207ENST00000533521 CCDC129Q6ZRS4 1044 aa26.48■■□□□ 1.83
BEST1-207ENST00000533521 ABRAQ8N0Z2 381 aa26.48■■□□□ 1.83
BEST1-207ENST00000533521 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.48■■□□□ 1.83
BEST1-207ENST00000533521 A0A0D9SFI3 127 aa26.47■■□□□ 1.83
BEST1-207ENST00000533521 TTLL1O95922 423 aa26.47■■□□□ 1.83
BEST1-207ENST00000533521 ZKSCAN1P17029 563 aaPredicted RBP26.47■■□□□ 1.83
BEST1-207ENST00000533521 GMCL1P1Q8NEA9 526 aa26.47■■□□□ 1.83
BEST1-207ENST00000533521 CEP95Q96GE4 821 aa26.47■■□□□ 1.83
BEST1-207ENST00000533521 FAM227BQ96M60 508 aa26.47■■□□□ 1.83
BEST1-207ENST00000533521 PPP1R9AQ9ULJ8 1098 aa26.47■■□□□ 1.83
BEST1-207ENST00000533521 HIP1O00291 1037 aa26.46■■□□□ 1.83
BEST1-207ENST00000533521 PRDM1O75626 825 aa26.46■■□□□ 1.83
BEST1-207ENST00000533521 SLC25A27O95847 323 aa26.46■■□□□ 1.83
BEST1-207ENST00000533521 TSPY3P0CV98 308 aa26.46■■□□□ 1.83
BEST1-207ENST00000533521 TSPY8P0CW00 308 aa26.46■■□□□ 1.83
BEST1-207ENST00000533521 VPS53Q5VIR6 699 aa26.46■■□□□ 1.83
BEST1-207ENST00000533521 STK11IPQ8N1F8 1099 aa26.46■■□□□ 1.83
BEST1-207ENST00000533521 ANKLE1Q8NAG6 615 aa26.46■■□□□ 1.83
BEST1-207ENST00000533521 RILPL2Q969X0 211 aa26.46■■□□□ 1.83
BEST1-207ENST00000533521 ATG4CQ96DT6 458 aa26.46■■□□□ 1.83
BEST1-207ENST00000533521 CLIP2Q9UDT6 1046 aa26.46■■□□□ 1.83
BEST1-207ENST00000533521 ORC4O43929 436 aa26.45■■□□□ 1.82
BEST1-207ENST00000533521 SDSP20132 328 aa26.45■■□□□ 1.82
BEST1-207ENST00000533521 COPB2P35606 906 aa26.45■■□□□ 1.82
BEST1-207ENST00000533521 DEFB118Q96PH6 123 aa26.45■■□□□ 1.82
BEST1-207ENST00000533521 COL11A1P12107 1806 aaPredicted RBP26.44■■□□□ 1.82
BEST1-207ENST00000533521 CCDC171Q6TFL3 1326 aa26.44■■□□□ 1.82
BEST1-207ENST00000533521 VWA5AO00534 786 aa26.44■■□□□ 1.82
BEST1-207ENST00000533521 NDUFB10O96000 172 aa26.44■■□□□ 1.82
BEST1-207ENST00000533521 IGHA2P01877 340 aa26.44■■□□□ 1.82
BEST1-207ENST00000533521 FGAP02671 866 aa26.44■■□□□ 1.82
BEST1-207ENST00000533521 HSPD1P10809 573 aaKnown RBP26.44■■□□□ 1.82
BEST1-207ENST00000533521 PCP11498 1178 aaKnown RBP26.44■■□□□ 1.82
BEST1-207ENST00000533521 TFAP4Q01664 338 aa26.44■■□□□ 1.82
BEST1-207ENST00000533521 NMIQ13287 307 aaPredicted RBP26.44■■□□□ 1.82
BEST1-207ENST00000533521 FAM83BQ5T0W9 1011 aa26.44■■□□□ 1.82
BEST1-207ENST00000533521 TFRCP02786 760 aaKnown RBP26.43■■□□□ 1.82
BEST1-207ENST00000533521 ERCC3P19447 782 aa26.43■■□□□ 1.82
BEST1-207ENST00000533521 NOVP48745 357 aa26.43■■□□□ 1.82
BEST1-207ENST00000533521 NT5C2P49902 561 aa26.43■■□□□ 1.82
BEST1-207ENST00000533521 TMEM132BQ14DG7 1078 aa26.43■■□□□ 1.82
BEST1-207ENST00000533521 WDR78Q5VTH9 848 aa26.43■■□□□ 1.82
BEST1-207ENST00000533521 PRPF38AQ8NAV1 312 aaKnown RBP26.43■■□□□ 1.82
BEST1-207ENST00000533521 PRKAR2AP13861 404 aaKnown RBP26.42■■□□□ 1.82
BEST1-207ENST00000533521 TRIM32Q13049 653 aa26.42■■□□□ 1.82
BEST1-207ENST00000533521 RIOX2Q8IUF8 465 aa26.42■■□□□ 1.82
BEST1-207ENST00000533521 REPS2Q8NFH8 660 aa26.42■■□□□ 1.82
BEST1-207ENST00000533521 FBXO28Q9NVF7 368 aa26.42■■□□□ 1.82
BEST1-207ENST00000533521 SLC5A4Q9NY91 659 aa26.42■■□□□ 1.82
BEST1-207ENST00000533521 ATP2A1O14983 1001 aa26.41■■□□□ 1.82
BEST1-207ENST00000533521 FARP2O94887 1054 aaPredicted RBP26.41■■□□□ 1.82
BEST1-207ENST00000533521 FDX1P10109 184 aa26.41■■□□□ 1.82
BEST1-207ENST00000533521 CACNB2Q08289 660 aaPredicted RBP26.41■■□□□ 1.82
BEST1-207ENST00000533521 MFSD14CQ5VZR4 134 aa26.41■■□□□ 1.82
BEST1-207ENST00000533521 OLFML2BQ68BL8 750 aa26.41■■□□□ 1.82
BEST1-207ENST00000533521 ZNF589Q86UQ0 364 aaPredicted RBP26.41■■□□□ 1.82
BEST1-207ENST00000533521 SLF1Q9BQI6 1058 aa26.41■■□□□ 1.82
BEST1-207ENST00000533521 HTATIP2Q9BUP3 242 aa26.41■■□□□ 1.82
BEST1-207ENST00000533521 ZNF214Q9UL59 606 aaPredicted RBP26.41■■□□□ 1.82
BEST1-207ENST00000533521 ZNFX1Q9P2E3 1918 aaKnown RBP26.41■■□□□ 1.82
BEST1-207ENST00000533521 CCL14Q16627 93 aa26.4■■□□□ 1.82
BEST1-207ENST00000533521 FAM47AQ5JRC9 791 aa26.4■■□□□ 1.82
BEST1-207ENST00000533521 GMCL1Q96IK5 515 aa26.4■■□□□ 1.82
BEST1-207ENST00000533521 FEM1BQ9UK73 627 aa26.4■■□□□ 1.82
BEST1-207ENST00000533521 OGDHLQ9ULD0 1010 aa26.4■■□□□ 1.82
BEST1-207ENST00000533521 TSPY2A6NKD2 308 aa26.39■■□□□ 1.82
BEST1-207ENST00000533521 ADORA2AP29274 412 aa26.39■■□□□ 1.82
BEST1-207ENST00000533521 STAT3P40763 770 aa26.39■■□□□ 1.82
BEST1-207ENST00000533521 CTDSPL2Q05D32 466 aa26.39■■□□□ 1.82
BEST1-207ENST00000533521 PLS1Q14651 629 aa26.39■■□□□ 1.82
BEST1-207ENST00000533521 DPP9Q86TI2 863 aa26.39■■□□□ 1.82
BEST1-207ENST00000533521 RAD21O60216 631 aa26.38■■□□□ 1.81
BEST1-207ENST00000533521 PLA2G6O60733 806 aa26.38■■□□□ 1.81
BEST1-207ENST00000533521 FCER1AP12319 257 aa26.38■■□□□ 1.81
BEST1-207ENST00000533521 NCAPG2Q86XI2 1143 aa26.38■■□□□ 1.81
BEST1-207ENST00000533521 DIAPH3Q9NSV4 1193 aa26.38■■□□□ 1.81
BEST1-207ENST00000533521 TCP11L1Q9NUJ3 509 aa26.38■■□□□ 1.81
BEST1-207ENST00000533521 OAZ1P54368 228 aa26.37■■□□□ 1.81
BEST1-207ENST00000533521 SLFN13Q68D06 897 aa26.37■■□□□ 1.81
BEST1-207ENST00000533521 DHX30Q7L2E3 1194 aaKnown RBP eCLIP26.37■■□□□ 1.81
BEST1-207ENST00000533521 NPLOC4Q8TAT6 608 aa26.37■■□□□ 1.81
BEST1-207ENST00000533521 NUP88Q99567 741 aaPredicted RBP26.37■■□□□ 1.81
BEST1-207ENST00000533521 TEX13BQ9BXU2 312 aa26.37■■□□□ 1.81
BEST1-207ENST00000533521 IL17RBQ9NRM6 502 aa26.37■■□□□ 1.81
BEST1-207ENST00000533521 DIS3Q9Y2L1 958 aaKnown RBP26.37■■□□□ 1.81
BEST1-207ENST00000533521 MSCO60682 206 aa26.36■■□□□ 1.81
BEST1-207ENST00000533521 BMP3P12645 472 aa26.36■■□□□ 1.81
BEST1-207ENST00000533521 FLRT1Q9NZU1 646 aa26.36■■□□□ 1.81
BEST1-207ENST00000533521 RANBP6O60518 1105 aaKnown RBP26.35■■□□□ 1.81
BEST1-207ENST00000533521 PDE4AP27815 886 aa26.35■■□□□ 1.81
BEST1-207ENST00000533521 NECAB2Q7Z6G3 386 aa26.35■■□□□ 1.81
BEST1-207ENST00000533521 FAM160B2Q86V87 743 aa26.35■■□□□ 1.81
BEST1-207ENST00000533521 LRRC47Q8N1G4 583 aaKnown RBP26.35■■□□□ 1.81
BEST1-207ENST00000533521 CHURC1Q8WUH1 139 aa26.35■■□□□ 1.81
BEST1-207ENST00000533521 STAG1Q8WVM7 1258 aa26.35■■□□□ 1.81
BEST1-207ENST00000533521 RNF41Q9H4P4 317 aaPredicted RBP26.35■■□□□ 1.81
BEST1-207ENST00000533521 SLC38A10Q9HBR0 1119 aa26.35■■□□□ 1.81
BEST1-207ENST00000533521 TACC3Q9Y6A5 838 aa26.35■■□□□ 1.81
BEST1-207ENST00000533521 LAMA4Q16363 1823 aa26.35■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms