RNA–Protein interactions for RNA: ENST00000533308.1

COMMD9-207, Transcript of COMM domain containing 9, humanhuman

TSL 3

Gene COMMD9, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-207ENST00000533308 UPF2Q9HAU5 1272 aaKnown RBP9.25□□□□□ -0.93
COMMD9-207ENST00000533308 GPCPD1Q9NPB8 672 aa9.25□□□□□ -0.93
COMMD9-207ENST00000533308 PDRG1Q9NUG6 133 aa9.25□□□□□ -0.93
COMMD9-207ENST00000533308 TSKSQ9UJT2 592 aa9.25□□□□□ -0.93
COMMD9-207ENST00000533308 ISY1Q9ULR0 285 aaKnown RBP9.25□□□□□ -0.93
COMMD9-207ENST00000533308 CYP46A1Q9Y6A2 500 aa9.25□□□□□ -0.93
COMMD9-207ENST00000533308 ADGRA2Q96PE1 1338 aa9.25□□□□□ -0.93
COMMD9-207ENST00000533308 MYH6P13533 1939 aa9.25□□□□□ -0.93
COMMD9-207ENST00000533308 PCNTO95613 3336 aa9.25□□□□□ -0.93
COMMD9-207ENST00000533308 SMCHD1A6NHR9 2005 aa9.24□□□□□ -0.93
COMMD9-207ENST00000533308 MGAMO43451 1857 aa9.24□□□□□ -0.93
COMMD9-207ENST00000533308 KLF18A0A0U1RQI7 1052 aa9.24□□□□□ -0.93
COMMD9-207ENST00000533308 ERICH2A1L162 156 aa9.24□□□□□ -0.93
COMMD9-207ENST00000533308 SPDYE16A6NNV3 312 aaPredicted RBP9.24□□□□□ -0.93
COMMD9-207ENST00000533308 EIF5BO60841 1220 aaKnown RBP9.24□□□□□ -0.93
COMMD9-207ENST00000533308 PLEKHA8P1O95397 391 aa9.24□□□□□ -0.93
COMMD9-207ENST00000533308 HMGB1P09429 215 aaKnown RBP9.24□□□□□ -0.93
COMMD9-207ENST00000533308 SLC16A2P36021 539 aa9.24□□□□□ -0.93
COMMD9-207ENST00000533308 MAP2K2P36507 400 aa9.24□□□□□ -0.93
COMMD9-207ENST00000533308 NT5C2P49902 561 aa9.24□□□□□ -0.93
COMMD9-207ENST00000533308 NEK4P51957 841 aa9.24□□□□□ -0.93
COMMD9-207ENST00000533308 SNAP25P60880 206 aa9.24□□□□□ -0.93
COMMD9-207ENST00000533308 ZNF543Q08ER8 600 aa9.24□□□□□ -0.93
COMMD9-207ENST00000533308 TROAPQ12815 778 aa9.24□□□□□ -0.93
COMMD9-207ENST00000533308 CRHR2Q13324 411 aa9.24□□□□□ -0.93
COMMD9-207ENST00000533308 GRM4Q14833 912 aa9.24□□□□□ -0.93
COMMD9-207ENST00000533308 SART3Q15020 963 aaKnown RBP9.24□□□□□ -0.93
COMMD9-207ENST00000533308 APOA5Q6Q788 366 aa9.24□□□□□ -0.93
COMMD9-207ENST00000533308 NFXL1Q6ZNB6 911 aa9.24□□□□□ -0.93
COMMD9-207ENST00000533308 FASTKD5Q7L8L6 764 aaKnown RBP9.24□□□□□ -0.93
COMMD9-207ENST00000533308 SGMS1Q86VZ5 419 aa9.24□□□□□ -0.93
COMMD9-207ENST00000533308 NUP133Q8WUM0 1156 aa9.24□□□□□ -0.93
COMMD9-207ENST00000533308 LPAR1Q92633 364 aa9.24□□□□□ -0.93
COMMD9-207ENST00000533308 GMCL1Q96IK5 515 aa9.24□□□□□ -0.93
COMMD9-207ENST00000533308 P2RX7Q99572 595 aaKnown RBP9.24□□□□□ -0.93
COMMD9-207ENST00000533308 AGXT2Q9BYV1 514 aa9.24□□□□□ -0.93
COMMD9-207ENST00000533308 HPS5Q9UPZ3 1129 aa9.24□□□□□ -0.93
COMMD9-207ENST00000533308 BAZ2BQ9UIF8 2168 aaKnown RBP9.24□□□□□ -0.93
COMMD9-207ENST00000533308 RBBP6Q7Z6E9 1792 aaKnown RBP9.24□□□□□ -0.93
COMMD9-207ENST00000533308 CCDC69A6NI79 296 aa9.23□□□□□ -0.93
COMMD9-207ENST00000533308 GOLGA8BA8MQT2 603 aa9.23□□□□□ -0.93
COMMD9-207ENST00000533308 TMEM232C9JQI7 657 aa9.23□□□□□ -0.93
COMMD9-207ENST00000533308 PPFIA3O75145 1194 aa9.23□□□□□ -0.93
COMMD9-207ENST00000533308 ECM2O94769 699 aaPredicted RBP9.23□□□□□ -0.93
COMMD9-207ENST00000533308 TBC1D8O95759 1140 aa9.23□□□□□ -0.93
COMMD9-207ENST00000533308 BMP3P12645 472 aa9.23□□□□□ -0.93
COMMD9-207ENST00000533308 LIFRP42702 1097 aa9.23□□□□□ -0.93
COMMD9-207ENST00000533308 SLC1A4P43007 532 aa9.23□□□□□ -0.93
COMMD9-207ENST00000533308 FGD1P98174 961 aa9.23□□□□□ -0.93
COMMD9-207ENST00000533308 ST3GAL1Q11201 340 aa9.23□□□□□ -0.93
COMMD9-207ENST00000533308 TAF1CQ15572 869 aaPredicted RBP9.23□□□□□ -0.93
COMMD9-207ENST00000533308 CCDC178Q5BJE1 867 aa9.23□□□□□ -0.93
COMMD9-207ENST00000533308 CATSPERGQ6ZRH7 1159 aa9.23□□□□□ -0.93
COMMD9-207ENST00000533308 NBPF11Q86T75 865 aa9.23□□□□□ -0.93
COMMD9-207ENST00000533308 CMTR1Q8N1G2 835 aaKnown RBP9.23□□□□□ -0.93
COMMD9-207ENST00000533308 DCAF4Q8WV16 495 aa9.23□□□□□ -0.93
COMMD9-207ENST00000533308 ATG4CQ96DT6 458 aa9.23□□□□□ -0.93
COMMD9-207ENST00000533308 UBA5Q9GZZ9 404 aa9.23□□□□□ -0.93
COMMD9-207ENST00000533308 NCOA5Q9HCD5 579 aaKnown RBP9.23□□□□□ -0.93
COMMD9-207ENST00000533308 TXNRD2Q9NNW7 524 aa9.23□□□□□ -0.93
COMMD9-207ENST00000533308 RNF186Q9NXI6 227 aa9.23□□□□□ -0.93
COMMD9-207ENST00000533308 MAD2L2Q9UI95 211 aa9.23□□□□□ -0.93
COMMD9-207ENST00000533308 TPCN1Q9ULQ1 816 aa9.23□□□□□ -0.93
COMMD9-207ENST00000533308 NAP1L2Q9ULW6 460 aaPredicted RBP9.23□□□□□ -0.93
COMMD9-207ENST00000533308 SYNPO2Q9UMS6 1093 aa9.23□□□□□ -0.93
COMMD9-207ENST00000533308 PLXNB2O15031 1838 aa9.22□□□□□ -0.93
COMMD9-207ENST00000533308 GOLGA8AA7E2F4 631 aa9.22□□□□□ -0.93
COMMD9-207ENST00000533308 USP17L15C9J2P7 530 aa9.22□□□□□ -0.93
COMMD9-207ENST00000533308 USP17L13C9JLJ4 530 aa9.22□□□□□ -0.93
COMMD9-207ENST00000533308 USP17L11C9JVI0 530 aa9.22□□□□□ -0.93
COMMD9-207ENST00000533308 USP17L18D6R9N7 530 aa9.22□□□□□ -0.93
COMMD9-207ENST00000533308 USP17L22D6RA61 530 aa9.22□□□□□ -0.93
COMMD9-207ENST00000533308 USP17L17D6RBQ6 530 aa9.22□□□□□ -0.93
COMMD9-207ENST00000533308 USP17L19D6RCP7 530 aa9.22□□□□□ -0.93
COMMD9-207ENST00000533308 USP17L20D6RJB6 530 aa9.22□□□□□ -0.93
COMMD9-207ENST00000533308 TRPA1O75762 1119 aa9.22□□□□□ -0.93
COMMD9-207ENST00000533308 CNMDO75829 334 aa9.22□□□□□ -0.93
COMMD9-207ENST00000533308 FLOT1O75955 427 aa9.22□□□□□ -0.93
COMMD9-207ENST00000533308 DDAH1O94760 285 aa9.22□□□□□ -0.93
COMMD9-207ENST00000533308 CDC27P30260 824 aa9.22□□□□□ -0.93
COMMD9-207ENST00000533308 HOXA7P31268 230 aaPredicted RBP9.22□□□□□ -0.93
COMMD9-207ENST00000533308 HERVK_113P62684 666 aa9.22□□□□□ -0.93
COMMD9-207ENST00000533308 IRX3P78415 501 aaPredicted RBP9.22□□□□□ -0.93
COMMD9-207ENST00000533308 CAP1Q01518 475 aa9.22□□□□□ -0.93
COMMD9-207ENST00000533308 USP17L24Q0WX57 530 aa9.22□□□□□ -0.93
COMMD9-207ENST00000533308 STK3Q13188 491 aa9.22□□□□□ -0.93
COMMD9-207ENST00000533308 PPP4R3BQ5MIZ7 849 aa9.22□□□□□ -0.93
COMMD9-207ENST00000533308 CATIPQ7Z7H3 387 aa9.22□□□□□ -0.93
COMMD9-207ENST00000533308 REPS2Q8NFH8 660 aa9.22□□□□□ -0.93
COMMD9-207ENST00000533308 KIFC2Q96AC6 838 aa9.22□□□□□ -0.93
COMMD9-207ENST00000533308 PARK7Q99497 189 aaKnown RBP9.22□□□□□ -0.93
COMMD9-207ENST00000533308 SLF1Q9BQI6 1058 aa9.22□□□□□ -0.93
COMMD9-207ENST00000533308 MTA3Q9BTC8 594 aa9.22□□□□□ -0.93
COMMD9-207ENST00000533308 FAM217BQ9NTX9 383 aaPredicted RBP9.22□□□□□ -0.93
COMMD9-207ENST00000533308 BTBD7Q9P203 1132 aa9.22□□□□□ -0.93
COMMD9-207ENST00000533308 CPA4Q9UI42 421 aa9.22□□□□□ -0.93
COMMD9-207ENST00000533308 PPP1R9AQ9ULJ8 1098 aa9.22□□□□□ -0.93
COMMD9-207ENST00000533308 SLC12A7Q9Y666 1083 aa9.22□□□□□ -0.93
COMMD9-207ENST00000533308 NID2Q14112 1375 aa9.22□□□□□ -0.93
COMMD9-207ENST00000533308 LCTP09848 1927 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms