RNA–Protein interactions for RNA: ENST00000533279.1

GMDS-210, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 5

Gene GMDS, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-210ENST00000533279 AFG3L2Q9Y4W6 797 aa13.23□□□□□ -0.29
GMDS-210ENST00000533279 IRF6O14896 467 aa13.22□□□□□ -0.29
GMDS-210ENST00000533279 NDUFB10O96000 172 aa13.22□□□□□ -0.29
GMDS-210ENST00000533279 OSBPP22059 807 aa13.22□□□□□ -0.29
GMDS-210ENST00000533279 STAT2P52630 851 aa13.22□□□□□ -0.29
GMDS-210ENST00000533279 IRX3P78415 501 aaPredicted RBP13.22□□□□□ -0.29
GMDS-210ENST00000533279 JAG1P78504 1218 aa13.22□□□□□ -0.29
GMDS-210ENST00000533279 TRAF1Q13077 416 aa13.22□□□□□ -0.29
GMDS-210ENST00000533279 GRM1Q13255 1194 aa13.22□□□□□ -0.29
GMDS-210ENST00000533279 DEFB115Q30KQ5 88 aa13.22□□□□□ -0.29
GMDS-210ENST00000533279 SPRYD7Q5W111 196 aa13.22□□□□□ -0.29
GMDS-210ENST00000533279 FANCBQ8NB91 859 aa13.22□□□□□ -0.29
GMDS-210ENST00000533279 C12orf42Q96LP6 360 aa13.22□□□□□ -0.29
GMDS-210ENST00000533279 GPHNQ9NQX3 736 aaPredicted RBP13.22□□□□□ -0.29
GMDS-210ENST00000533279 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.22□□□□□ -0.29
GMDS-210ENST00000533279 SEC63Q9UGP8 760 aaKnown RBP13.22□□□□□ -0.29
GMDS-210ENST00000533279 FEM1BQ9UK73 627 aa13.22□□□□□ -0.29
GMDS-210ENST00000533279 KCNH4Q9UQ05 1017 aa13.22□□□□□ -0.29
GMDS-210ENST00000533279 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.22□□□□□ -0.29
GMDS-210ENST00000533279 CCL15-CCL14A0A0B4J2E2 113 aa13.21□□□□□ -0.29
GMDS-210ENST00000533279 A0A0G2JLL6 359 aaPredicted RBP13.21□□□□□ -0.29
GMDS-210ENST00000533279 SLC10A3P09131 477 aa13.21□□□□□ -0.29
GMDS-210ENST00000533279 PDHBP11177 359 aa13.21□□□□□ -0.29
GMDS-210ENST00000533279 VCAM1P19320 739 aa13.21□□□□□ -0.29
GMDS-210ENST00000533279 PDIA3P30101 505 aaKnown RBP13.21□□□□□ -0.29
GMDS-210ENST00000533279 EVCP57679 992 aa13.21□□□□□ -0.29
GMDS-210ENST00000533279 INHBEP58166 350 aa13.21□□□□□ -0.29
GMDS-210ENST00000533279 MKRN3Q13064 507 aaKnown RBP13.21□□□□□ -0.29
GMDS-210ENST00000533279 NOGQ13253 232 aa13.21□□□□□ -0.29
GMDS-210ENST00000533279 GRM4Q14833 912 aa13.21□□□□□ -0.29
GMDS-210ENST00000533279 CCL15Q16663 113 aa13.21□□□□□ -0.29
GMDS-210ENST00000533279 SH3D19Q5HYK7 790 aa13.21□□□□□ -0.29
GMDS-210ENST00000533279 PRRT2Q7Z6L0 340 aaPredicted RBP13.21□□□□□ -0.29
GMDS-210ENST00000533279 RASAL3Q86YV0 1011 aa13.21□□□□□ -0.29
GMDS-210ENST00000533279 CCDC144CPQ8IYA2 1237 aa13.21□□□□□ -0.29
GMDS-210ENST00000533279 REM2Q8IYK8 340 aaPredicted RBP13.21□□□□□ -0.29
GMDS-210ENST00000533279 SPICE1Q8N0Z3 855 aa13.21□□□□□ -0.29
GMDS-210ENST00000533279 MYL10Q9BUA6 226 aa13.21□□□□□ -0.29
GMDS-210ENST00000533279 TPCN1Q9ULQ1 816 aa13.21□□□□□ -0.29
GMDS-210ENST00000533279 A0A1W2PRG0 241 aa13.2□□□□□ -0.3
GMDS-210ENST00000533279 USP17L15C9J2P7 530 aa13.2□□□□□ -0.3
GMDS-210ENST00000533279 USP17L13C9JLJ4 530 aa13.2□□□□□ -0.3
GMDS-210ENST00000533279 USP17L11C9JVI0 530 aa13.2□□□□□ -0.3
GMDS-210ENST00000533279 USP17L18D6R9N7 530 aa13.2□□□□□ -0.3
GMDS-210ENST00000533279 USP17L22D6RA61 530 aa13.2□□□□□ -0.3
GMDS-210ENST00000533279 USP17L17D6RBQ6 530 aa13.2□□□□□ -0.3
GMDS-210ENST00000533279 USP17L19D6RCP7 530 aa13.2□□□□□ -0.3
GMDS-210ENST00000533279 USP17L20D6RJB6 530 aa13.2□□□□□ -0.3
GMDS-210ENST00000533279 PFKFB2O60825 505 aa13.2□□□□□ -0.3
GMDS-210ENST00000533279 FDX1P10109 184 aa13.2□□□□□ -0.3
GMDS-210ENST00000533279 RXRAP19793 462 aa13.2□□□□□ -0.3
GMDS-210ENST00000533279 C1QBPQ07021 282 aaKnown RBP13.2□□□□□ -0.3
GMDS-210ENST00000533279 ZNF543Q08ER8 600 aa13.2□□□□□ -0.3
GMDS-210ENST00000533279 USP17L24Q0WX57 530 aa13.2□□□□□ -0.3
GMDS-210ENST00000533279 TROAPQ12815 778 aa13.2□□□□□ -0.3
GMDS-210ENST00000533279 FAM83BQ5T0W9 1011 aa13.2□□□□□ -0.3
GMDS-210ENST00000533279 SAMD1Q6SPF0 538 aaPredicted RBP13.2□□□□□ -0.3
GMDS-210ENST00000533279 RAB11FIP4Q86YS3 637 aa13.2□□□□□ -0.3
GMDS-210ENST00000533279 GTF3C2Q8WUA4 911 aaPredicted RBP13.2□□□□□ -0.3
GMDS-210ENST00000533279 WASF1Q92558 559 aa13.2□□□□□ -0.3
GMDS-210ENST00000533279 GTF3C6Q969F1 213 aa13.2□□□□□ -0.3
GMDS-210ENST00000533279 LARP6Q9BRS8 491 aaKnown RBP13.2□□□□□ -0.3
GMDS-210ENST00000533279 RPAP3Q9H6T3 665 aaPredicted RBP13.2□□□□□ -0.3
GMDS-210ENST00000533279 GPCPD1Q9NPB8 672 aa13.2□□□□□ -0.3
GMDS-210ENST00000533279 TSHZ2Q9NRE2 1034 aa13.2□□□□□ -0.3
GMDS-210ENST00000533279 PNMA2Q9UL42 364 aa13.2□□□□□ -0.3
GMDS-210ENST00000533279 BRPF3Q9ULD4 1205 aa13.2□□□□□ -0.3
GMDS-210ENST00000533279 NID2Q14112 1375 aa13.2□□□□□ -0.3
GMDS-210ENST00000533279 FRMPD2Q68DX3 1309 aaPredicted RBP13.19□□□□□ -0.3
GMDS-210ENST00000533279 RASSF10A6NK89 507 aa13.19□□□□□ -0.3
GMDS-210ENST00000533279 TMEM232C9JQI7 657 aa13.19□□□□□ -0.3
GMDS-210ENST00000533279 KLRF2D3W0D1 207 aa13.19□□□□□ -0.3
GMDS-210ENST00000533279 FLOT1O75955 427 aa13.19□□□□□ -0.3
GMDS-210ENST00000533279 XBP1P17861 261 aa13.19□□□□□ -0.3
GMDS-210ENST00000533279 CCT2P78371 535 aaKnown RBP13.19□□□□□ -0.3
GMDS-210ENST00000533279 HMGN5P82970 282 aaKnown RBP13.19□□□□□ -0.3
GMDS-210ENST00000533279 KCTD1Q719H9 257 aa13.19□□□□□ -0.3
GMDS-210ENST00000533279 CCDC83Q8IWF9 413 aa13.19□□□□□ -0.3
GMDS-210ENST00000533279 FAM184AQ8NB25 1140 aa13.19□□□□□ -0.3
GMDS-210ENST00000533279 NKX2-3Q8TAU0 364 aa13.19□□□□□ -0.3
GMDS-210ENST00000533279 RRP36Q96EU6 259 aaKnown RBP13.19□□□□□ -0.3
GMDS-210ENST00000533279 TMX3Q96JJ7 454 aa13.19□□□□□ -0.3
GMDS-210ENST00000533279 SLF1Q9BQI6 1058 aa13.19□□□□□ -0.3
GMDS-210ENST00000533279 LLPHQ9BRT6 129 aaKnown RBP13.19□□□□□ -0.3
GMDS-210ENST00000533279 SENP2Q9HC62 589 aa13.19□□□□□ -0.3
GMDS-210ENST00000533279 AGTPBP1Q9UPW5 1226 aa13.19□□□□□ -0.3
GMDS-210ENST00000533279 MYPNQ86TC9 1320 aa13.18□□□□□ -0.3
GMDS-210ENST00000533279 PLA2G6O60733 806 aa13.18□□□□□ -0.3
GMDS-210ENST00000533279 ZBED4O75132 1171 aa13.18□□□□□ -0.3
GMDS-210ENST00000533279 SNHG28P0DPA3 235 aa13.18□□□□□ -0.3
GMDS-210ENST00000533279 SMARCA1P28370 1054 aa13.18□□□□□ -0.3
GMDS-210ENST00000533279 SSRP1Q08945 709 aaKnown RBP13.18□□□□□ -0.3
GMDS-210ENST00000533279 ME3Q16798 604 aa13.18□□□□□ -0.3
GMDS-210ENST00000533279 SYDE2Q5VT97 1194 aa13.18□□□□□ -0.3
GMDS-210ENST00000533279 TMTC3Q6ZXV5 915 aa13.18□□□□□ -0.3
GMDS-210ENST00000533279 SIAH1Q8IUQ4 282 aa13.18□□□□□ -0.3
GMDS-210ENST00000533279 SMCR8Q8TEV9 937 aaPredicted RBP13.18□□□□□ -0.3
GMDS-210ENST00000533279 CAPNS2Q96L46 248 aa13.18□□□□□ -0.3
GMDS-210ENST00000533279 PARK7Q99497 189 aaKnown RBP13.18□□□□□ -0.3
GMDS-210ENST00000533279 ZCCHC17Q9NP64 241 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms